RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 CHCHD4Q8N4Q1 142 aa15.77■□□□□ 0.12
CPSF3-203ENST00000475482 KDF1Q8NAX2 398 aaPredicted RBP15.77■□□□□ 0.12
CPSF3-203ENST00000475482 IFT81Q8WYA0 676 aa15.77■□□□□ 0.12
CPSF3-203ENST00000475482 HMCESQ96FZ2 354 aa15.77■□□□□ 0.12
CPSF3-203ENST00000475482 TRIM51Q9BSJ1 452 aa15.77■□□□□ 0.12
CPSF3-203ENST00000475482 PCDH9Q9HC56 1237 aa15.77■□□□□ 0.12
CPSF3-203ENST00000475482 SAE1Q9UBE0 346 aaPredicted RBP15.77■□□□□ 0.12
CPSF3-203ENST00000475482 KLK13Q9UKR3 277 aa15.77■□□□□ 0.12
CPSF3-203ENST00000475482 APOBEC2Q9Y235 224 aaKnown RBP15.77■□□□□ 0.12
CPSF3-203ENST00000475482 MFHAS1Q9Y4C4 1052 aa15.77■□□□□ 0.12
CPSF3-203ENST00000475482 TDRD6O60522 2096 aaKnown RBP15.77■□□□□ 0.11
CPSF3-203ENST00000475482 C1QTNF9BB2RNN3 333 aa15.76■□□□□ 0.11
CPSF3-203ENST00000475482 TMCC1O94876 653 aa15.76■□□□□ 0.11
CPSF3-203ENST00000475482 POP4O95707 220 aaKnown RBP15.76■□□□□ 0.11
CPSF3-203ENST00000475482 C1QTNF9P0C862 333 aa15.76■□□□□ 0.11
CPSF3-203ENST00000475482 ITIH2P19823 946 aa15.76■□□□□ 0.11
CPSF3-203ENST00000475482 EPHA8P29322 1005 aaPredicted RBP15.76■□□□□ 0.11
CPSF3-203ENST00000475482 ADCY8P40145 1251 aa15.76■□□□□ 0.11
CPSF3-203ENST00000475482 MRPS25P82663 173 aaKnown RBP15.76■□□□□ 0.11
CPSF3-203ENST00000475482 STAT4Q14765 748 aa15.76■□□□□ 0.11
CPSF3-203ENST00000475482 MYLK3Q32MK0 819 aa15.76■□□□□ 0.11
CPSF3-203ENST00000475482 ZNF805Q5CZA5 627 aa15.76■□□□□ 0.11
CPSF3-203ENST00000475482 AFMIDQ63HM1 303 aa15.76■□□□□ 0.11
CPSF3-203ENST00000475482 EMBQ6PCB8 327 aa15.76■□□□□ 0.11
CPSF3-203ENST00000475482 NPNTQ6UXI9 565 aa15.76■□□□□ 0.11
CPSF3-203ENST00000475482 PARS2Q7L3T8 475 aaKnown RBP15.76■□□□□ 0.11
CPSF3-203ENST00000475482 ABI3BPQ7Z7G0 1075 aa15.76■□□□□ 0.11
CPSF3-203ENST00000475482 PCGF5Q86SE9 256 aa15.76■□□□□ 0.11
CPSF3-203ENST00000475482 ZC3H18Q86VM9 953 aaKnown RBP15.76■□□□□ 0.11
CPSF3-203ENST00000475482 LRRC49Q8IUZ0 686 aa15.76■□□□□ 0.11
CPSF3-203ENST00000475482 OXR1Q8N573 874 aa15.76■□□□□ 0.11
CPSF3-203ENST00000475482 TFB1MQ8WVM0 346 aaKnown RBP15.76■□□□□ 0.11
CPSF3-203ENST00000475482 RAB7BQ96AH8 199 aa15.76■□□□□ 0.11
CPSF3-203ENST00000475482 SNF8Q96H20 258 aa15.76■□□□□ 0.11
CPSF3-203ENST00000475482 FAM118BQ9BPY3 351 aa15.76■□□□□ 0.11
CPSF3-203ENST00000475482 TMEM121Q9BTD3 319 aa15.76■□□□□ 0.11
CPSF3-203ENST00000475482 TSPYL1Q9H0U9 437 aa15.76■□□□□ 0.11
CPSF3-203ENST00000475482 PDFQ9HBH1 243 aa15.76■□□□□ 0.11
CPSF3-203ENST00000475482 GPR27Q9NS67 375 aa15.76■□□□□ 0.11
CPSF3-203ENST00000475482 DTLQ9NZJ0 730 aa15.76■□□□□ 0.11
CPSF3-203ENST00000475482 WHRNQ9P202 907 aa15.76■□□□□ 0.11
CPSF3-203ENST00000475482 WDFY3Q8IZQ1 3526 aa15.75■□□□□ 0.11
CPSF3-203ENST00000475482 C16orf96A6NNT2 1141 aa15.75■□□□□ 0.11
CPSF3-203ENST00000475482 BHMG1C9JSJ3 638 aaPredicted RBP15.75■□□□□ 0.11
CPSF3-203ENST00000475482 AREL1O15033 823 aa15.75■□□□□ 0.11
CPSF3-203ENST00000475482 SLC31A1O15431 190 aa15.75■□□□□ 0.11
CPSF3-203ENST00000475482 SPINT1O43278 529 aa15.75■□□□□ 0.11
CPSF3-203ENST00000475482 TNFSF14O43557 240 aa15.75■□□□□ 0.11
CPSF3-203ENST00000475482 ATXN1LP0C7T5 689 aaKnown RBP15.75■□□□□ 0.11
CPSF3-203ENST00000475482 HNRNPA2B1P22626 353 aaKnown RBP15.75■□□□□ 0.11
CPSF3-203ENST00000475482 GKP32189 559 aa15.75■□□□□ 0.11
CPSF3-203ENST00000475482 NDST2P52849 883 aa15.75■□□□□ 0.11
CPSF3-203ENST00000475482 IL9RQ01113 521 aa15.75■□□□□ 0.11
CPSF3-203ENST00000475482 FGL2Q14314 439 aa15.75■□□□□ 0.11
CPSF3-203ENST00000475482 ST3GAL2Q16842 350 aa15.75■□□□□ 0.11
CPSF3-203ENST00000475482 SEL1L3Q68CR1 1132 aa15.75■□□□□ 0.11
CPSF3-203ENST00000475482 KIAA1161Q6NSJ0 714 aa15.75■□□□□ 0.11
CPSF3-203ENST00000475482 LEKR1Q6ZMV7 388 aa15.75■□□□□ 0.11
CPSF3-203ENST00000475482 CEP128Q6ZU80 1094 aa15.75■□□□□ 0.11
CPSF3-203ENST00000475482 PNPLA1Q8N8W4 532 aa15.75■□□□□ 0.11
CPSF3-203ENST00000475482 ASB12Q8WXK4 309 aa15.75■□□□□ 0.11
CPSF3-203ENST00000475482 QKIQ96PU8 341 aaKnown RBP eCLIP15.75■□□□□ 0.11
CPSF3-203ENST00000475482 OSBPL1AQ9BXW6 950 aa15.75■□□□□ 0.11
CPSF3-203ENST00000475482 TRIM31Q9BZY9 425 aa15.75■□□□□ 0.11
CPSF3-203ENST00000475482 DPH5Q9H2P9 285 aa15.75■□□□□ 0.11
CPSF3-203ENST00000475482 ZDHHC6Q9H6R6 413 aa15.75■□□□□ 0.11
CPSF3-203ENST00000475482 MTRF1LQ9UGC7 380 aaKnown RBP15.75■□□□□ 0.11
CPSF3-203ENST00000475482 CA5BQ9Y2D0 317 aa15.75■□□□□ 0.11
CPSF3-203ENST00000475482 HS3ST3A1Q9Y663 406 aa15.75■□□□□ 0.11
CPSF3-203ENST00000475482 LRRK1Q38SD2 2015 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 SMAPO00193 183 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 TSPAN6O43657 245 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 MFSD11O43934 449 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 PRAMEF11O60813 436 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 PCDH8O95206 1070 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 IFNB1P01574 187 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 CAPNS1P04632 268 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 ABL2P42684 1182 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 ARRB1P49407 418 aaPredicted RBP15.74■□□□□ 0.11
CPSF3-203ENST00000475482 RPS21P63220 83 aaKnown RBP15.74■□□□□ 0.11
CPSF3-203ENST00000475482 GBE1Q04446 702 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 CYTH1Q15438 398 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 P3H1Q32P28 736 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 INAVAQ3KP66 663 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 ATXN7L2Q5T6C5 722 aaPredicted RBP15.74■□□□□ 0.11
CPSF3-203ENST00000475482 FBXL19Q6PCT2 694 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 FBXO38Q6PIJ6 1188 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 GCNT7Q6ZNI0 430 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 GATAD2AQ86YP4 633 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 ARHGAP12Q8IWW6 846 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 OR6K2Q8NGY2 324 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 FAM174AQ8TBP5 190 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 KLK6Q92876 244 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 KLHDC7BQ96G42 594 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 FEM1CQ96JP0 617 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 BMFQ96LC9 184 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 GDAP1L1Q96MZ0 367 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 OLFM3Q96PB7 478 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 C1QTNF2Q9BXJ5 285 aa15.74■□□□□ 0.11
CPSF3-203ENST00000475482 SLC17A9Q9BYT1 436 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms