RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 GRK6P43250 576 aa18.99■□□□□ 0.63
PTCD3-210ENST00000473829 FOXK2Q01167 660 aa18.99■□□□□ 0.63
PTCD3-210ENST00000473829 WASHC5Q12768 1159 aa18.99■□□□□ 0.63
PTCD3-210ENST00000473829 ZNF211Q13398 564 aaPredicted RBP18.99■□□□□ 0.63
PTCD3-210ENST00000473829 SUZ12Q15022 739 aaKnown RBP18.99■□□□□ 0.63
PTCD3-210ENST00000473829 TRIP6Q15654 476 aaKnown RBP18.99■□□□□ 0.63
PTCD3-210ENST00000473829 BZW1Q7L1Q6 419 aaKnown RBP18.99■□□□□ 0.63
PTCD3-210ENST00000473829 DCP2Q8IU60 420 aaKnown RBP18.99■□□□□ 0.63
PTCD3-210ENST00000473829 PELI3Q8N2H9 469 aa18.99■□□□□ 0.63
PTCD3-210ENST00000473829 SCRN2Q96FV2 425 aa18.99■□□□□ 0.63
PTCD3-210ENST00000473829 COQ10AQ96MF6 247 aa18.99■□□□□ 0.63
PTCD3-210ENST00000473829 QKIQ96PU8 341 aaKnown RBP eCLIP18.99■□□□□ 0.63
PTCD3-210ENST00000473829 RBM15Q96T37 977 aaKnown RBP eCLIP18.99■□□□□ 0.63
PTCD3-210ENST00000473829 C10orf88Q9H8K7 445 aa18.99■□□□□ 0.63
PTCD3-210ENST00000473829 HAUS2Q9NVX0 235 aa18.99■□□□□ 0.63
PTCD3-210ENST00000473829 UCKL1Q9NWZ5 548 aa18.99■□□□□ 0.63
PTCD3-210ENST00000473829 KLF15Q9UIH9 416 aa18.99■□□□□ 0.63
PTCD3-210ENST00000473829 ARID1BQ8NFD5 2236 aaPredicted RBP18.98■□□□□ 0.63
PTCD3-210ENST00000473829 APOC4-APOC2K7ER74 178 aa18.98■□□□□ 0.63
PTCD3-210ENST00000473829 APOC2P02655 101 aa18.98■□□□□ 0.63
PTCD3-210ENST00000473829 HNF1BP35680 557 aa18.98■□□□□ 0.63
PTCD3-210ENST00000473829 EIF2B5Q13144 721 aaKnown RBP18.98■□□□□ 0.63
PTCD3-210ENST00000473829 INPP5AQ14642 412 aa18.98■□□□□ 0.63
PTCD3-210ENST00000473829 NOMO1Q15155 1222 aa18.98■□□□□ 0.63
PTCD3-210ENST00000473829 DENND2CQ68D51 928 aa18.98■□□□□ 0.63
PTCD3-210ENST00000473829 NYAP1Q6ZVC0 841 aa18.98■□□□□ 0.63
PTCD3-210ENST00000473829 USP45Q70EL2 814 aa18.98■□□□□ 0.63
PTCD3-210ENST00000473829 HSD11B1LQ7Z5J1 315 aa18.98■□□□□ 0.63
PTCD3-210ENST00000473829 GLRX5Q86SX6 157 aa18.98■□□□□ 0.63
PTCD3-210ENST00000473829 PARGQ86W56 976 aa18.98■□□□□ 0.63
PTCD3-210ENST00000473829 SYCE1Q8N0S2 351 aa18.98■□□□□ 0.63
PTCD3-210ENST00000473829 CBARPQ8N350 705 aaPredicted RBP18.98■□□□□ 0.63
PTCD3-210ENST00000473829 LPCAT1Q8NF37 534 aa18.98■□□□□ 0.63
PTCD3-210ENST00000473829 IMP4Q96G21 291 aaKnown RBP18.98■□□□□ 0.63
PTCD3-210ENST00000473829 FAM118BQ9BPY3 351 aa18.98■□□□□ 0.63
PTCD3-210ENST00000473829 PCDH9Q9HC56 1237 aa18.98■□□□□ 0.63
PTCD3-210ENST00000473829 DNAJC28Q9NX36 388 aa18.98■□□□□ 0.63
PTCD3-210ENST00000473829 GUCA1BQ9UMX6 200 aa18.98■□□□□ 0.63
PTCD3-210ENST00000473829 EFR3BQ9Y2G0 817 aa18.98■□□□□ 0.63
PTCD3-210ENST00000473829 OR1A2Q9Y585 309 aa18.98■□□□□ 0.63
PTCD3-210ENST00000473829 A0A0J9YYE9 177 aa18.97■□□□□ 0.63
PTCD3-210ENST00000473829 GOLGA6L3A6NEY3 463 aa18.97■□□□□ 0.63
PTCD3-210ENST00000473829 CAPN8A6NHC0 703 aa18.97■□□□□ 0.63
PTCD3-210ENST00000473829 TRBC1P01850 177 aa18.97■□□□□ 0.63
PTCD3-210ENST00000473829 CYP2A6P11509 494 aaPredicted RBP18.97■□□□□ 0.63
PTCD3-210ENST00000473829 PMLP29590 882 aa18.97■□□□□ 0.63
PTCD3-210ENST00000473829 CD68P34810 354 aaPredicted RBP18.97■□□□□ 0.63
PTCD3-210ENST00000473829 OTUD4Q01804 1114 aaKnown RBP18.97■□□□□ 0.63
PTCD3-210ENST00000473829 ACOX1Q15067 660 aa18.97■□□□□ 0.63
PTCD3-210ENST00000473829 TEX44Q53QW1 395 aa18.97■□□□□ 0.63
PTCD3-210ENST00000473829 RFLNAQ6ZTI6 216 aa18.97■□□□□ 0.63
PTCD3-210ENST00000473829 SLC25A45Q8N413 288 aa18.97■□□□□ 0.63
PTCD3-210ENST00000473829 RNF10Q8N5U6 811 aaKnown RBP18.97■□□□□ 0.63
PTCD3-210ENST00000473829 EID2Q8N6I1 236 aa18.97■□□□□ 0.63
PTCD3-210ENST00000473829 SPATA22Q8NHS9 363 aa18.97■□□□□ 0.63
PTCD3-210ENST00000473829 ACTL9Q8TC94 416 aa18.97■□□□□ 0.63
PTCD3-210ENST00000473829 TADA1Q96BN2 335 aa18.97■□□□□ 0.63
PTCD3-210ENST00000473829 IFT43Q96FT9 208 aa18.97■□□□□ 0.63
PTCD3-210ENST00000473829 HES6Q96HZ4 224 aa18.97■□□□□ 0.63
PTCD3-210ENST00000473829 TEKT5Q96M29 485 aa18.97■□□□□ 0.63
PTCD3-210ENST00000473829 TSGA10Q9BZW7 698 aa18.97■□□□□ 0.63
PTCD3-210ENST00000473829 GLOD4Q9HC38 313 aa18.97■□□□□ 0.63
PTCD3-210ENST00000473829 TOR4AQ9NXH8 423 aa18.97■□□□□ 0.63
PTCD3-210ENST00000473829 MIF4GDA9UHW6 222 aaKnown RBP18.96■□□□□ 0.63
PTCD3-210ENST00000473829 K7ESM1 405 aa18.96■□□□□ 0.63
PTCD3-210ENST00000473829 PIAS2O75928 621 aa18.96■□□□□ 0.63
PTCD3-210ENST00000473829 TOP3BO95985 862 aaKnown RBP18.96■□□□□ 0.63
PTCD3-210ENST00000473829 MT-CYBP00156 380 aaPredicted RBP18.96■□□□□ 0.63
PTCD3-210ENST00000473829 CSF2P04141 144 aa18.96■□□□□ 0.63
PTCD3-210ENST00000473829 FTH1P19P0C7X4 201 aa18.96■□□□□ 0.63
PTCD3-210ENST00000473829 NME1P15531 152 aaKnown RBP18.96■□□□□ 0.63
PTCD3-210ENST00000473829 DGKAP23743 735 aa18.96■□□□□ 0.63
PTCD3-210ENST00000473829 ETV3P41162 512 aa18.96■□□□□ 0.63
PTCD3-210ENST00000473829 THOP1P52888 689 aa18.96■□□□□ 0.63
PTCD3-210ENST00000473829 EPHB1P54762 984 aa18.96■□□□□ 0.63
PTCD3-210ENST00000473829 YPEL5P62699 121 aa18.96■□□□□ 0.63
PTCD3-210ENST00000473829 MTM1Q13496 603 aa18.96■□□□□ 0.63
PTCD3-210ENST00000473829 INAVAQ3KP66 663 aa18.96■□□□□ 0.63
PTCD3-210ENST00000473829 LRRC66Q68CR7 880 aa18.96■□□□□ 0.63
PTCD3-210ENST00000473829 CRTC1Q6UUV9 634 aa18.96■□□□□ 0.63
PTCD3-210ENST00000473829 MACC1Q6ZN28 852 aa18.96■□□□□ 0.63
PTCD3-210ENST00000473829 RBFAQ8N0V3 343 aa18.96■□□□□ 0.63
PTCD3-210ENST00000473829 UBL4BQ8N7F7 174 aa18.96■□□□□ 0.63
PTCD3-210ENST00000473829 NUS1Q96E22 293 aa18.96■□□□□ 0.63
PTCD3-210ENST00000473829 DTD2Q96FN9 168 aa18.96■□□□□ 0.63
PTCD3-210ENST00000473829 TRIB3Q96RU7 358 aa18.96■□□□□ 0.63
PTCD3-210ENST00000473829 APOOQ9BUR5 198 aa18.96■□□□□ 0.63
PTCD3-210ENST00000473829 SLC25A51Q9H1U9 297 aa18.96■□□□□ 0.63
PTCD3-210ENST00000473829 TCEAL2Q9H3H9 227 aaPredicted RBP18.96■□□□□ 0.63
PTCD3-210ENST00000473829 WASF3Q9UPY6 502 aa18.96■□□□□ 0.63
PTCD3-210ENST00000473829 HACD1B0YJ81 288 aa18.95■□□□□ 0.62
PTCD3-210ENST00000473829 F5H423 210 aaPredicted RBP18.95■□□□□ 0.62
PTCD3-210ENST00000473829 KRT86O43790 486 aa18.95■□□□□ 0.62
PTCD3-210ENST00000473829 C1SP09871 688 aa18.95■□□□□ 0.62
PTCD3-210ENST00000473829 CCDC175P0C221 793 aa18.95■□□□□ 0.62
PTCD3-210ENST00000473829 ATXN1LP0C7T5 689 aaKnown RBP18.95■□□□□ 0.62
PTCD3-210ENST00000473829 GIMD1P0DJR0 217 aa18.95■□□□□ 0.62
PTCD3-210ENST00000473829 NFKB1P19838 968 aa18.95■□□□□ 0.62
PTCD3-210ENST00000473829 CA4P22748 312 aa18.95■□□□□ 0.62
PTCD3-210ENST00000473829 RBL1P28749 1068 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms