RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 NMUR1Q9HB89 426 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 ENTPD7Q9NQZ7 604 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 AKAP10O43572 662 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 PFDN1O60925 122 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 IGLV3-25P01717 112 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 EMP3P54852 163 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 FAM45BPQ6NSW5 357 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 FAM45AQ8TCE6 357 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 GTF3C2Q8WUA4 911 aaPredicted RBP21.18■□□□□ 0.98
COL18A1-207ENST00000473212 PTCD2Q8WV60 388 aaKnown RBP21.18■□□□□ 0.98
COL18A1-207ENST00000473212 RANBP9Q96S59 729 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 TSPAN18Q96SJ8 248 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 NOL6Q9H6R4 1146 aaKnown RBP21.18■□□□□ 0.98
COL18A1-207ENST00000473212 AGO3Q9H9G7 860 aaKnown RBP21.18■□□□□ 0.98
COL18A1-207ENST00000473212 MRM3Q9HC36 420 aaKnown RBP21.18■□□□□ 0.98
COL18A1-207ENST00000473212 MRGBPQ9NV56 204 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 DUS2Q9NX74 493 aaKnown RBP21.18■□□□□ 0.98
COL18A1-207ENST00000473212 LMCD1Q9NZU5 365 aa21.18■□□□□ 0.98
COL18A1-207ENST00000473212 J3KR12 359 aa21.17■□□□□ 0.98
COL18A1-207ENST00000473212 CDK9P50750 372 aaKnown RBP21.17■□□□□ 0.98
COL18A1-207ENST00000473212 CDH13P55290 713 aa21.17■□□□□ 0.98
COL18A1-207ENST00000473212 PRAMEP78395 509 aa21.17■□□□□ 0.98
COL18A1-207ENST00000473212 PRKCQQ04759 706 aa21.17■□□□□ 0.98
COL18A1-207ENST00000473212 EIF4EBP2Q13542 120 aaPredicted RBP21.17■□□□□ 0.98
COL18A1-207ENST00000473212 DCTN2Q13561 401 aaKnown RBP21.17■□□□□ 0.98
COL18A1-207ENST00000473212 RIN3Q8TB24 985 aa21.17■□□□□ 0.98
COL18A1-207ENST00000473212 C3orf30Q96M34 536 aa21.17■□□□□ 0.98
COL18A1-207ENST00000473212 GSTO2Q9H4Y5 243 aa21.17■□□□□ 0.98
COL18A1-207ENST00000473212 IL1RL2Q9HB29 575 aa21.17■□□□□ 0.98
COL18A1-207ENST00000473212 OSER1Q9NX31 292 aa21.17■□□□□ 0.98
COL18A1-207ENST00000473212 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.17■□□□□ 0.98
COL18A1-207ENST00000473212 MARCH4Q9P2E8 410 aaPredicted RBP21.17■□□□□ 0.98
COL18A1-207ENST00000473212 LRRC14BA6NHZ5 514 aa21.17■□□□□ 0.98
COL18A1-207ENST00000473212 ATP6V1B2P21281 511 aa21.17■□□□□ 0.98
COL18A1-207ENST00000473212 GALK1P51570 392 aa21.17■□□□□ 0.98
COL18A1-207ENST00000473212 CDKN2DP55273 166 aa21.17■□□□□ 0.98
COL18A1-207ENST00000473212 NHSL2Q5HYW2 709 aa21.17■□□□□ 0.98
COL18A1-207ENST00000473212 C8orf82Q6P1X6 216 aaPredicted RBP21.17■□□□□ 0.98
COL18A1-207ENST00000473212 USP50Q70EL3 339 aaPredicted RBP21.17■□□□□ 0.98
COL18A1-207ENST00000473212 ERI1Q8IV48 349 aaKnown RBP21.17■□□□□ 0.98
COL18A1-207ENST00000473212 FIBCD1Q8N539 461 aa21.17■□□□□ 0.98
COL18A1-207ENST00000473212 FAM47BQ8NA70 645 aa21.17■□□□□ 0.98
COL18A1-207ENST00000473212 ANKRD60Q9BZ19 345 aa21.17■□□□□ 0.98
COL18A1-207ENST00000473212 ALG9Q9H6U8 611 aa21.17■□□□□ 0.98
COL18A1-207ENST00000473212 RHBDL2Q9NX52 303 aa21.17■□□□□ 0.98
COL18A1-207ENST00000473212 SAC3D1A6NKF1 404 aa21.16■□□□□ 0.98
COL18A1-207ENST00000473212 ITKQ08881 620 aa21.16■□□□□ 0.98
COL18A1-207ENST00000473212 MAP7D1Q3KQU3 841 aa21.16■□□□□ 0.98
COL18A1-207ENST00000473212 GPR158Q5T848 1215 aa21.16■□□□□ 0.98
COL18A1-207ENST00000473212 MANEALQ5VSG8 457 aa21.16■□□□□ 0.98
COL18A1-207ENST00000473212 CD300LGQ6UXG3 332 aa21.16■□□□□ 0.98
COL18A1-207ENST00000473212 LARP4Q71RC2 724 aaKnown RBP eCLIP21.16■□□□□ 0.982e-8■□□□□ 8.8
COL18A1-207ENST00000473212 SCD5Q86SK9 330 aa21.16■□□□□ 0.98
COL18A1-207ENST00000473212 FUNDC1Q8IVP5 155 aa21.16■□□□□ 0.98
COL18A1-207ENST00000473212 CCDC117Q8IWD4 279 aaPredicted RBP21.16■□□□□ 0.98
COL18A1-207ENST00000473212 OR13J1Q8NGT2 312 aa21.16■□□□□ 0.98
COL18A1-207ENST00000473212 TRIM8Q9BZR9 551 aa21.16■□□□□ 0.98
COL18A1-207ENST00000473212 NT5MQ9NPB1 228 aa21.16■□□□□ 0.98
COL18A1-207ENST00000473212 HS3ST4Q9Y661 456 aa21.16■□□□□ 0.98
COL18A1-207ENST00000473212 MIA3Q5JRA6 1907 aa21.16■□□□□ 0.98
COL18A1-207ENST00000473212 CROCCQ5TZA2 2017 aa21.16■□□□□ 0.98
COL18A1-207ENST00000473212 SUPT7LO94864 414 aa21.16■□□□□ 0.98
COL18A1-207ENST00000473212 RBP1P09455 135 aa21.16■□□□□ 0.98
COL18A1-207ENST00000473212 SLC5A3P53794 718 aa21.16■□□□□ 0.98
COL18A1-207ENST00000473212 ADARP55265 1226 aaKnown RBP21.16■□□□□ 0.98
COL18A1-207ENST00000473212 RETREG3Q86VR2 466 aa21.16■□□□□ 0.98
COL18A1-207ENST00000473212 OR2T34Q8NGX1 318 aa21.16■□□□□ 0.98
COL18A1-207ENST00000473212 OR2T3Q8NH03 318 aa21.16■□□□□ 0.98
COL18A1-207ENST00000473212 DIS3LQ8TF46 1054 aaKnown RBP21.16■□□□□ 0.98
COL18A1-207ENST00000473212 UPF3AQ9H1J1 476 aaKnown RBP21.16■□□□□ 0.98
COL18A1-207ENST00000473212 SLC38A7Q9NVC3 462 aa21.16■□□□□ 0.98
COL18A1-207ENST00000473212 CRYL1Q9Y2S2 319 aa21.16■□□□□ 0.98
COL18A1-207ENST00000473212 MGEA5O60502 916 aa21.15■□□□□ 0.98
COL18A1-207ENST00000473212 STAMBPO95630 424 aa21.15■□□□□ 0.98
COL18A1-207ENST00000473212 ALDOCP09972 364 aaKnown RBP21.15■□□□□ 0.98
COL18A1-207ENST00000473212 HAPLN1P10915 354 aaPredicted RBP21.15■□□□□ 0.98
COL18A1-207ENST00000473212 PCSK1P29120 753 aa21.15■□□□□ 0.98
COL18A1-207ENST00000473212 CD86P42081 329 aa21.15■□□□□ 0.98
COL18A1-207ENST00000473212 DSC2Q02487 901 aa21.15■□□□□ 0.98
COL18A1-207ENST00000473212 SLC10A7Q0GE19 358 aa21.15■□□□□ 0.98
COL18A1-207ENST00000473212 FBXO48Q5FWF7 155 aa21.15■□□□□ 0.98
COL18A1-207ENST00000473212 PPP4R4Q6NUP7 873 aa21.15■□□□□ 0.98
COL18A1-207ENST00000473212 FAM171BQ6P995 826 aa21.15■□□□□ 0.98
COL18A1-207ENST00000473212 ANKFN1Q8N957 763 aa21.15■□□□□ 0.98
COL18A1-207ENST00000473212 IRGQQ8WZA9 623 aa21.15■□□□□ 0.98
COL18A1-207ENST00000473212 CLK4Q9HAZ1 481 aaKnown RBP21.15■□□□□ 0.98
COL18A1-207ENST00000473212 CIDEBQ9UHD4 219 aa21.15■□□□□ 0.98
COL18A1-207ENST00000473212 E9PAM4 449 aa21.15■□□□□ 0.98
COL18A1-207ENST00000473212 CHRNA1P02708 482 aa21.15■□□□□ 0.98
COL18A1-207ENST00000473212 SLC4A1P02730 911 aa21.15■□□□□ 0.98
COL18A1-207ENST00000473212 HSPA8P11142 646 aaKnown RBP21.15■□□□□ 0.98
COL18A1-207ENST00000473212 PLOD1Q02809 727 aaPredicted RBP21.15■□□□□ 0.98
COL18A1-207ENST00000473212 HECTD2Q5U5R9 776 aa21.15■□□□□ 0.98
COL18A1-207ENST00000473212 AURKCQ9UQB9 309 aa21.15■□□□□ 0.98
COL18A1-207ENST00000473212 SQORQ9Y6N5 450 aa21.15■□□□□ 0.98
COL18A1-207ENST00000473212 TANC1Q9C0D5 1861 aa21.14■□□□□ 0.98
COL18A1-207ENST00000473212 FAM163BP0C2L3 166 aa21.14■□□□□ 0.98
COL18A1-207ENST00000473212 UGT1A6P19224 532 aa21.14■□□□□ 0.98
COL18A1-207ENST00000473212 LPIN1Q14693 890 aa21.14■□□□□ 0.98
COL18A1-207ENST00000473212 ACAP2Q15057 778 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms