RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 CHKBQ9Y259 395 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 PPIL1Q9Y3C6 166 aa13.18□□□□□ -0.3
TPM3-216ENST00000473036 ARID1BQ8NFD5 2236 aaPredicted RBP13.17□□□□□ -0.3
TPM3-216ENST00000473036 NPIPB15A6NHN6 443 aaPredicted RBP13.17□□□□□ -0.3
TPM3-216ENST00000473036 ENC1O14682 589 aa13.17□□□□□ -0.3
TPM3-216ENST00000473036 ZNF500O60304 480 aaPredicted RBP13.17□□□□□ -0.3
TPM3-216ENST00000473036 TJP3O95049 919 aa13.17□□□□□ -0.3
TPM3-216ENST00000473036 CPP00450 1065 aa13.17□□□□□ -0.3
TPM3-216ENST00000473036 RBP3P10745 1247 aa13.17□□□□□ -0.3
TPM3-216ENST00000473036 C6P13671 934 aa13.17□□□□□ -0.3
TPM3-216ENST00000473036 GNSP15586 552 aa13.17□□□□□ -0.3
TPM3-216ENST00000473036 CD38P28907 300 aa13.17□□□□□ -0.3
TPM3-216ENST00000473036 GRIA4P48058 902 aa13.17□□□□□ -0.3
TPM3-216ENST00000473036 LIG3P49916 1009 aa13.17□□□□□ -0.3
TPM3-216ENST00000473036 ATXN3P54252 364 aaPredicted RBP13.17□□□□□ -0.3
TPM3-216ENST00000473036 EIF3EP60228 445 aaKnown RBP13.17□□□□□ -0.3
TPM3-216ENST00000473036 CCDC15Q0P6D6 951 aa13.17□□□□□ -0.3
TPM3-216ENST00000473036 TUBB2AQ13885 445 aa13.17□□□□□ -0.3
TPM3-216ENST00000473036 RPS6KA1Q15418 735 aa13.17□□□□□ -0.3
TPM3-216ENST00000473036 SHBQ15464 509 aa13.17□□□□□ -0.3
TPM3-216ENST00000473036 CDKN3Q16667 212 aa13.17□□□□□ -0.3
TPM3-216ENST00000473036 KCTD19Q17RG1 926 aaPredicted RBP13.17□□□□□ -0.3
TPM3-216ENST00000473036 SETMARQ53H47 684 aaPredicted RBP13.17□□□□□ -0.3
TPM3-216ENST00000473036 ZNF569Q5MCW4 686 aa13.17□□□□□ -0.3
TPM3-216ENST00000473036 LIPIQ6XZB0 460 aa13.17□□□□□ -0.3
TPM3-216ENST00000473036 RFLNAQ6ZTI6 216 aa13.17□□□□□ -0.3
TPM3-216ENST00000473036 DPPA4Q7L190 304 aa13.17□□□□□ -0.3
TPM3-216ENST00000473036 ADAT2Q7Z6V5 191 aaKnown RBP13.17□□□□□ -0.3
TPM3-216ENST00000473036 SLC13A5Q86YT5 568 aaPredicted RBP13.17□□□□□ -0.3
TPM3-216ENST00000473036 SLC22A18ASQ8N1D0 253 aa13.17□□□□□ -0.3
TPM3-216ENST00000473036 TP53I13Q8NBR0 393 aaPredicted RBP13.17□□□□□ -0.3
TPM3-216ENST00000473036 SLC35B2Q8TB61 432 aa13.17□□□□□ -0.3
TPM3-216ENST00000473036 ATG4AQ8WYN0 398 aa13.17□□□□□ -0.3
TPM3-216ENST00000473036 OXNAD1Q96HP4 312 aaPredicted RBP13.17□□□□□ -0.3
TPM3-216ENST00000473036 MCCC1Q96RQ3 725 aaPredicted RBP13.17□□□□□ -0.3
TPM3-216ENST00000473036 TUBB2BQ9BVA1 445 aa13.17□□□□□ -0.3
TPM3-216ENST00000473036 SLC25A51Q9H1U9 297 aa13.17□□□□□ -0.3
TPM3-216ENST00000473036 GPR27Q9NS67 375 aa13.17□□□□□ -0.3
TPM3-216ENST00000473036 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.17□□□□□ -0.3
TPM3-216ENST00000473036 DMTF1Q9Y222 760 aa13.17□□□□□ -0.3
TPM3-216ENST00000473036 ANKRD6Q9Y2G4 727 aa13.17□□□□□ -0.3
TPM3-216ENST00000473036 TDRD6O60522 2096 aaKnown RBP13.17□□□□□ -0.3
TPM3-216ENST00000473036 PCNX2A6NKB5 2137 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 CTAGE9A4FU28 777 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 GOLGA8CPA6NN73 597 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 HACD1B0YJ81 288 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 PRAMEF26H0Y7S4 382 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 H7C0C1 242 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 TAF4O00268 1085 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 NEMP1O14524 444 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 VILLO15195 856 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 FANCGO15287 622 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 HYAL3O43820 417 aaPredicted RBP13.16□□□□□ -0.3
TPM3-216ENST00000473036 HOXB3P14651 431 aaPredicted RBP13.16□□□□□ -0.3
TPM3-216ENST00000473036 NFKB1P19838 968 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 HNRNPA2B1P22626 353 aaKnown RBP13.16□□□□□ -0.3
TPM3-216ENST00000473036 CXCR5P32302 372 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 HNF1BP35680 557 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 IGFALSP35858 605 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 ATP5OP48047 213 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 SUOXP51687 545 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 GDF10P55107 478 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 FAM193AP78312 1265 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 SIM1P81133 766 aaPredicted RBP13.16□□□□□ -0.3
TPM3-216ENST00000473036 CNGA3Q16281 694 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 HLA-BQ31612 363 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 ARMC12Q5T9G4 340 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 KDELC1Q6UW63 502 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 BZW1Q7L1Q6 419 aaKnown RBP13.16□□□□□ -0.3
TPM3-216ENST00000473036 ABI3BPQ7Z7G0 1075 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 PROSER1Q86XN7 944 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 SLC35F6Q8N357 371 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 MINDY1Q8N5J2 469 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 OR13H1Q8NG92 308 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 LENG8Q96PV6 779 aaPredicted RBP13.16□□□□□ -0.3
TPM3-216ENST00000473036 GTPBP2Q9BX10 602 aaKnown RBP13.16□□□□□ -0.3
TPM3-216ENST00000473036 AASDHPPTQ9NRN7 309 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 UBP1Q9NZI7 540 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 DNPEPQ9ULA0 475 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 PNMA8BQ9ULN7 279 aaPredicted RBP13.16□□□□□ -0.3
TPM3-216ENST00000473036 PHTF1Q9UMS5 762 aa13.16□□□□□ -0.3
TPM3-216ENST00000473036 FNDC3AQ9Y2H6 1198 aaKnown RBP13.16□□□□□ -0.3
TPM3-216ENST00000473036 LAMA5O15230 3695 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 SCN8AQ9UQD0 1980 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 A0A0J9YYE9 177 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 TLR4O00206 839 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 OPHN1O60890 802 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 TM7SF2O76062 418 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 TOP3BO95985 862 aaKnown RBP13.15□□□□□ -0.3
TPM3-216ENST00000473036 TRBC1P01850 177 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 SYPP08247 313 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 CES1P23141 567 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 CASQ1P31415 396 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 NXPH1P58417 271 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 ELP6Q0PNE2 266 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 OLIG2Q13516 323 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 GALNT3Q14435 633 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 OASLQ15646 514 aaKnown RBP13.15□□□□□ -0.3
TPM3-216ENST00000473036 QPCTQ16769 361 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 WSCD2Q2TBF2 565 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms