RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 OR13F1Q8NGS4 319 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 CDKL2Q92772 493 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 VN1R3Q9BXE9 311 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 NANOGQ9H9S0 305 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 POLR1BQ9H9Y6 1135 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 RSAD1Q9HA92 442 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 ARMC1Q9NVT9 282 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 WRAP73Q9P2S5 460 aaPredicted RBP10.14□□□□□ -0.79
APTX-216ENST00000472896 NXF1Q9UBU9 619 aaKnown RBP10.14□□□□□ -0.79
APTX-216ENST00000472896 VTI1BQ9UEU0 232 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 PSME2Q9UL46 239 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 TBX20Q9UMR3 447 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 PCDHGC3Q9UN70 934 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 COL1A2P08123 1366 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 PLOD2O00469 737 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 DHX15O43143 795 aaKnown RBP10.14□□□□□ -0.79
APTX-216ENST00000472896 GMNNO75496 209 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 LYPLA2O95372 231 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 DCNP07585 359 aaKnown RBP10.14□□□□□ -0.79
APTX-216ENST00000472896 SP9P0CG40 484 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 CTSAP10619 480 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 GARSP41250 739 aaKnown RBP10.14□□□□□ -0.79
APTX-216ENST00000472896 MAGEA3P43357 314 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 TRPC1P48995 793 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 SLC26A2P50443 739 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 CLCN3P51790 818 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 PKNOX1P55347 436 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 OGDHQ02218 1023 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 PRKCQQ04759 706 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 MERTKQ12866 999 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 TFDP2Q14188 446 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 PTK2BQ14289 1009 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 MAPRE2Q15555 327 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 RSPO4Q2I0M5 234 aaPredicted RBP10.14□□□□□ -0.79
APTX-216ENST00000472896 OTOGLQ3ZCN5 2332 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 SLC36A3Q495N2 470 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 SLC9B1Q4ZJI4 515 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 SLX4IPQ5VYV7 408 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 TXNRD3NBQ6F5E7 133 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 DENND4AQ7Z401 1863 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 ANKRD13BQ86YJ7 626 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 TMEM35BQ8NCS4 154 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 LILRB4Q8NHJ6 448 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 ACSF2Q96CM8 615 aaPredicted RBP10.14□□□□□ -0.79
APTX-216ENST00000472896 FEM1CQ96JP0 617 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 RIT2Q99578 217 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 SLC29A1Q99808 456 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 SDCBP2Q9H190 292 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 PLAC1Q9HBJ0 212 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 ZNF302Q9NR11 478 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 RAB6BQ9NRW1 208 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 TOPORSQ9NS56 1045 aaPredicted RBP10.14□□□□□ -0.79
APTX-216ENST00000472896 MOCS1Q9NZB8 636 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.14□□□□□ -0.79
APTX-216ENST00000472896 PKD2L2Q9NZM6 624 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 WNT16Q9UBV4 365 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 SARDHQ9UL12 918 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 TCAF1Q9Y4C2 921 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 TIMM22Q9Y584 194 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 DMDP11532 3685 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 TPRP12270 2363 aaKnown RBP10.13□□□□□ -0.79
APTX-216ENST00000472896 CEP250Q9BV73 2442 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 A0A0U1RQF3 1178 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 LRRIQ4A6NIV6 560 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 ALDH1A2O94788 518 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 MYO1DO94832 1006 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 UGT2B4P06133 528 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 TPSB2P20231 275 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 CDH5P33151 784 aaPredicted RBP10.13□□□□□ -0.79
APTX-216ENST00000472896 ALDH7A1P49419 539 aaKnown RBP10.13□□□□□ -0.79
APTX-216ENST00000472896 HLCSP50747 726 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 KPNA1P52294 538 aaPredicted RBP10.13□□□□□ -0.79
APTX-216ENST00000472896 MPP1Q00013 466 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 E2F2Q14209 437 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 TPSAB1Q15661 275 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 MTX3Q5HYI7 312 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 STEAP4Q687X5 459 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 KCTD8Q6ZWB6 473 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 DDX53Q86TM3 631 aaKnown RBP10.13□□□□□ -0.79
APTX-216ENST00000472896 CAND1Q86VP6 1230 aaKnown RBP10.13□□□□□ -0.79
APTX-216ENST00000472896 LRRC49Q8IUZ0 686 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 ZC3H7AQ8IWR0 971 aaKnown RBP10.13□□□□□ -0.79
APTX-216ENST00000472896 SLC44A3Q8N4M1 653 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 LINC01465Q8N7H1 131 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 SUMF1Q8NBK3 374 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 CMASQ8NFW8 434 aaPredicted RBP10.13□□□□□ -0.79
APTX-216ENST00000472896 SPATA18Q8TC71 538 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 POMGNT1Q8WZA1 660 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 USP13Q92995 863 aaPredicted RBP10.13□□□□□ -0.79
APTX-216ENST00000472896 TMEM169Q96HH4 297 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 SH3YL1Q96HL8 342 aaPredicted RBP10.13□□□□□ -0.79
APTX-216ENST00000472896 KLHL5Q96PQ7 755 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 ZNF577Q9BSK1 485 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 PI4K2AQ9BTU6 479 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 C9orf16Q9BUW7 83 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 ADI1Q9BV57 179 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 ILKAPQ9H0C8 392 aaPredicted RBP10.13□□□□□ -0.79
APTX-216ENST00000472896 SEMA6AQ9H2E6 1030 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 RAD21L1Q9H4I0 556 aa10.13□□□□□ -0.79
APTX-216ENST00000472896 ZBTB26Q9HCK0 441 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms