RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 A8MX80 341 aa15.34■□□□□ 0.05
VTI1A-203ENST00000472892 TNFRSF10CO14798 259 aa15.34■□□□□ 0.05
VTI1A-203ENST00000472892 SOCS5O75159 536 aa15.34■□□□□ 0.05
VTI1A-203ENST00000472892 TLE3Q04726 772 aa15.34■□□□□ 0.05
VTI1A-203ENST00000472892 ZNF235Q14590 738 aa15.34■□□□□ 0.05
VTI1A-203ENST00000472892 RALGPS1Q5JS13 557 aa15.34■□□□□ 0.05
VTI1A-203ENST00000472892 PNCKQ6P2M8 343 aa15.34■□□□□ 0.05
VTI1A-203ENST00000472892 SPACA3Q8IXA5 215 aa15.34■□□□□ 0.05
VTI1A-203ENST00000472892 PAF1Q8N7H5 531 aa15.34■□□□□ 0.05
VTI1A-203ENST00000472892 ZNF248Q8NDW4 579 aa15.34■□□□□ 0.05
VTI1A-203ENST00000472892 OR56A4Q8NGH8 313 aa15.34■□□□□ 0.05
VTI1A-203ENST00000472892 PCDH19Q8TAB3 1148 aa15.34■□□□□ 0.05
VTI1A-203ENST00000472892 OR1E3Q8WZA6 343 aa15.34■□□□□ 0.05
VTI1A-203ENST00000472892 ATXN7L3BQ96GX2 97 aa15.34■□□□□ 0.05
VTI1A-203ENST00000472892 COQ10AQ96MF6 247 aa15.34■□□□□ 0.05
VTI1A-203ENST00000472892 MGME1Q9BQP7 344 aa15.34■□□□□ 0.05
VTI1A-203ENST00000472892 NOD2Q9HC29 1040 aa15.34■□□□□ 0.05
VTI1A-203ENST00000472892 ASCL3Q9NQ33 180 aa15.34■□□□□ 0.05
VTI1A-203ENST00000472892 RCOR3Q9P2K3 495 aaPredicted RBP15.34■□□□□ 0.05
VTI1A-203ENST00000472892 B4GALT6Q9UBX8 382 aa15.34■□□□□ 0.05
VTI1A-203ENST00000472892 ANAPC7Q9UJX3 599 aa15.34■□□□□ 0.05
VTI1A-203ENST00000472892 GPR34Q9UPC5 381 aa15.34■□□□□ 0.05
VTI1A-203ENST00000472892 LUC7L2Q9Y383 392 aaKnown RBP15.34■□□□□ 0.05
VTI1A-203ENST00000472892 MYO1FO00160 1098 aa15.33■□□□□ 0.04
VTI1A-203ENST00000472892 CACNB4O00305 520 aaPredicted RBP15.33■□□□□ 0.04
VTI1A-203ENST00000472892 NTN3O00634 580 aaPredicted RBP15.33■□□□□ 0.04
VTI1A-203ENST00000472892 CASC3O15234 703 aaKnown RBP15.33■□□□□ 0.04
VTI1A-203ENST00000472892 KELP23276 732 aa15.33■□□□□ 0.04
VTI1A-203ENST00000472892 SERPINB6P35237 376 aa15.33■□□□□ 0.04
VTI1A-203ENST00000472892 ARSEP51690 589 aa15.33■□□□□ 0.04
VTI1A-203ENST00000472892 CDH6P55285 790 aa15.33■□□□□ 0.04
VTI1A-203ENST00000472892 PCBP4P57723 403 aaKnown RBP15.33■□□□□ 0.04
VTI1A-203ENST00000472892 CCDC173Q0VFZ6 552 aa15.33■□□□□ 0.04
VTI1A-203ENST00000472892 ACOX1Q15067 660 aa15.33■□□□□ 0.04
VTI1A-203ENST00000472892 NFKBIBQ15653 356 aa15.33■□□□□ 0.04
VTI1A-203ENST00000472892 MARC1Q5VT66 337 aa15.33■□□□□ 0.04
VTI1A-203ENST00000472892 ALKBH5Q6P6C2 394 aaKnown RBP15.33■□□□□ 0.04
VTI1A-203ENST00000472892 OGFOD3Q6PK18 319 aa15.33■□□□□ 0.04
VTI1A-203ENST00000472892 LRRC49Q8IUZ0 686 aa15.33■□□□□ 0.04
VTI1A-203ENST00000472892 BBS5Q8N3I7 341 aa15.33■□□□□ 0.04
VTI1A-203ENST00000472892 ATPAF2Q8N5M1 289 aa15.33■□□□□ 0.04
VTI1A-203ENST00000472892 KYQ8NBH2 561 aa15.33■□□□□ 0.04
VTI1A-203ENST00000472892 PDXPQ96GD0 296 aa15.33■□□□□ 0.04
VTI1A-203ENST00000472892 PRR11Q96HE9 360 aaPredicted RBP15.33■□□□□ 0.04
VTI1A-203ENST00000472892 SLC46A1Q96NT5 459 aa15.33■□□□□ 0.04
VTI1A-203ENST00000472892 LGR4Q9BXB1 951 aa15.33■□□□□ 0.04
VTI1A-203ENST00000472892 FGF22Q9HCT0 170 aa15.33■□□□□ 0.04
VTI1A-203ENST00000472892 SIRPGQ9P1W8 387 aa15.33■□□□□ 0.04
VTI1A-203ENST00000472892 PHTF1Q9UMS5 762 aa15.33■□□□□ 0.04
VTI1A-203ENST00000472892 NENFQ9UMX5 172 aa15.33■□□□□ 0.04
VTI1A-203ENST00000472892 SATB2Q9UPW6 733 aa15.33■□□□□ 0.04
VTI1A-203ENST00000472892 PCDHGA8Q9Y5G5 932 aa15.33■□□□□ 0.04
VTI1A-203ENST00000472892 COL27A1Q8IZC6 1860 aaPredicted RBP15.33■□□□□ 0.04
VTI1A-203ENST00000472892 GYPCP04921 128 aa15.32■□□□□ 0.04
VTI1A-203ENST00000472892 MMP13P45452 471 aa15.32■□□□□ 0.04
VTI1A-203ENST00000472892 PDX1P52945 283 aa15.32■□□□□ 0.04
VTI1A-203ENST00000472892 CNGA3Q16281 694 aa15.32■□□□□ 0.04
VTI1A-203ENST00000472892 C3orf38Q5JPI3 329 aa15.32■□□□□ 0.04
VTI1A-203ENST00000472892 CCDC122Q5T0U0 273 aa15.32■□□□□ 0.04
VTI1A-203ENST00000472892 PELI3Q8N2H9 469 aa15.32■□□□□ 0.04
VTI1A-203ENST00000472892 TEX26Q8N6G2 289 aa15.32■□□□□ 0.04
VTI1A-203ENST00000472892 GPR156Q8NFN8 814 aa15.32■□□□□ 0.04
VTI1A-203ENST00000472892 OR6C4Q8NGE1 309 aa15.32■□□□□ 0.04
VTI1A-203ENST00000472892 NSMCE1Q8WV22 266 aa15.32■□□□□ 0.04
VTI1A-203ENST00000472892 SCRN2Q96FV2 425 aa15.32■□□□□ 0.04
VTI1A-203ENST00000472892 UBL7Q96S82 380 aaPredicted RBP15.32■□□□□ 0.04
VTI1A-203ENST00000472892 MRPL40Q9NQ50 206 aaKnown RBP15.32■□□□□ 0.04
VTI1A-203ENST00000472892 THSD1Q9NS62 852 aa15.32■□□□□ 0.04
VTI1A-203ENST00000472892 KCTD5Q9NXV2 234 aa15.32■□□□□ 0.04
VTI1A-203ENST00000472892 RABGEF1Q9UJ41 708 aa15.32■□□□□ 0.04
VTI1A-203ENST00000472892 PPIL1Q9Y3C6 166 aa15.32■□□□□ 0.04
VTI1A-203ENST00000472892 RP1P56715 2156 aa15.31■□□□□ 0.04
VTI1A-203ENST00000472892 GOLGA6L19H0YKK7 550 aa15.31■□□□□ 0.04
VTI1A-203ENST00000472892 PDE2AO00408 941 aaPredicted RBP15.31■□□□□ 0.04
VTI1A-203ENST00000472892 HEXIM1O94992 359 aaKnown RBP15.31■□□□□ 0.04
VTI1A-203ENST00000472892 PGLSO95336 258 aa15.31■□□□□ 0.04
VTI1A-203ENST00000472892 CPP00450 1065 aa15.31■□□□□ 0.04
VTI1A-203ENST00000472892 CD48P09326 243 aa15.31■□□□□ 0.04
VTI1A-203ENST00000472892 CYP2A6P11509 494 aaPredicted RBP15.31■□□□□ 0.04
VTI1A-203ENST00000472892 NFKBIAP25963 317 aa15.31■□□□□ 0.04
VTI1A-203ENST00000472892 RBMS1P29558 406 aaKnown RBP15.31■□□□□ 0.04
VTI1A-203ENST00000472892 HNRNPH3P31942 346 aaKnown RBP15.31■□□□□ 0.04
VTI1A-203ENST00000472892 VIPR1P32241 457 aa15.31■□□□□ 0.04
VTI1A-203ENST00000472892 MAXP61244 160 aa15.31■□□□□ 0.04
VTI1A-203ENST00000472892 TRAF2Q12933 501 aa15.31■□□□□ 0.04
VTI1A-203ENST00000472892 MMRN1Q13201 1228 aa15.31■□□□□ 0.04
VTI1A-203ENST00000472892 SPIDRQ14159 915 aa15.31■□□□□ 0.04
VTI1A-203ENST00000472892 KRT81Q14533 505 aa15.31■□□□□ 0.04
VTI1A-203ENST00000472892 TCEA2Q15560 299 aa15.31■□□□□ 0.04
VTI1A-203ENST00000472892 HADHQ16836 314 aaKnown RBP15.31■□□□□ 0.04
VTI1A-203ENST00000472892 WDR36Q8NI36 951 aaKnown RBP15.31■□□□□ 0.04
VTI1A-203ENST00000472892 PDCD6IPQ8WUM4 868 aaKnown RBP15.31■□□□□ 0.04
VTI1A-203ENST00000472892 CCDC74AQ96AQ1 378 aa15.31■□□□□ 0.04
VTI1A-203ENST00000472892 FCRL3Q96P31 734 aaPredicted RBP15.31■□□□□ 0.04
VTI1A-203ENST00000472892 LGMNQ99538 433 aa15.31■□□□□ 0.04
VTI1A-203ENST00000472892 TEX101Q9BY14 249 aa15.31■□□□□ 0.04
VTI1A-203ENST00000472892 TMEM168Q9H0V1 697 aa15.31■□□□□ 0.04
VTI1A-203ENST00000472892 WDR26Q9H7D7 661 aa15.31■□□□□ 0.04
VTI1A-203ENST00000472892 IFNKQ9P0W0 207 aa15.31■□□□□ 0.04
VTI1A-203ENST00000472892 ANKRD36A6QL64 1941 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms