RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 TNIP2Q8NFZ5 429 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 FEZF2Q8TBJ5 459 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 PTPMT1Q8WUK0 201 aaPredicted RBP2.73□□□□□ -1.97
XRN1-210ENST00000472697 TFAP2BQ92481 460 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 SMARCE1Q969G3 411 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 BBS4Q96RK4 519 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 TEX12Q9BXU0 123 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 REXO4Q9GZR2 422 aaKnown RBP2.73□□□□□ -1.97
XRN1-210ENST00000472697 DNAI2Q9GZS0 605 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 NSUN3Q9H649 340 aaKnown RBP2.73□□□□□ -1.97
XRN1-210ENST00000472697 ARHGEF3Q9NR81 526 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 NCKIPSDQ9NZQ3 722 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 LRIT1Q9P2V4 623 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 MORF4L1Q9UBU8 362 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 SLC9A2Q9UBY0 812 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 NKX1-2Q9UD57 310 aaPredicted RBP2.73□□□□□ -1.97
XRN1-210ENST00000472697 MTUS1Q9ULD2 1270 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 NAP1L2Q9ULW6 460 aaPredicted RBP2.73□□□□□ -1.97
XRN1-210ENST00000472697 OAZ3Q9UMX2 235 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 PKP3Q9Y446 797 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 CHST2Q9Y4C5 530 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 ASXL1Q8IXJ9 1541 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 CEP152O94986 1710 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 COL24A1Q17RW2 1714 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 CASZ1Q86V15 1759 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 DLC1Q96QB1 1528 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 CYP3A7-CYP3A51PA0A087WV96 503 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 SAC3D1A6NKF1 404 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 A6NL46 340 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 CES2O00748 559 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 PRPF4O43172 522 aaKnown RBP eCLIP2.72□□□□□ -1.97
XRN1-210ENST00000472697 PAX4O43316 350 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 ADRB1P08588 477 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 DESP17661 470 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 CYP3A7P24462 503 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 PPIFP30405 207 aaKnown RBP2.72□□□□□ -1.97
XRN1-210ENST00000472697 GJC1P36383 396 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 CAMLGP49069 296 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 CYP4A11Q02928 519 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 SPOCK1Q08629 439 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 SMC1AQ14683 1233 aaKnown RBP2.72□□□□□ -1.97
XRN1-210ENST00000472697 KPNB1Q14974 876 aaKnown RBP2.72□□□□□ -1.97
XRN1-210ENST00000472697 PGM5Q15124 567 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 KBTBD12Q3ZCT8 623 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 ANKDD1AQ495B1 522 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 TBC1D9BQ66K14 1250 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 SLFN13Q68D06 897 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 NHLRC1Q6VVB1 395 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 MICALCLQ6ZW33 695 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 RRM2BQ7LG56 351 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 SPATA19Q7Z5L4 167 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 HOOK3Q86VS8 718 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 WDR5BQ86VZ2 330 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 RHPN2Q8IUC4 686 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 AFAP1Q8N556 730 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 MINDY1Q8N5J2 469 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 NHLRC2Q8NBF2 726 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 XXYLT1Q8NBI6 393 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 SYT8Q8NBV8 401 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 CEP76Q8TAP6 659 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 DCLRE1CQ96SD1 692 aaKnown RBP2.72□□□□□ -1.97
XRN1-210ENST00000472697 MGME1Q9BQP7 344 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 SIK2Q9H0K1 926 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 FZD8Q9H461 694 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 SYNPO2LQ9H987 977 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 MID1IP1Q9NPA3 183 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 ASNSD1Q9NWL6 643 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 OSER1Q9NX31 292 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 TRPM5Q9NZQ8 1165 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 FAM30AQ9NZY2 134 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 SEC63Q9UGP8 760 aaKnown RBP2.72□□□□□ -1.97
XRN1-210ENST00000472697 XPO7Q9UIA9 1087 aaKnown RBP2.72□□□□□ -1.97
XRN1-210ENST00000472697 MOSPD1Q9UJG1 213 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 TUBE1Q9UJT0 475 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 OSGIN2Q9Y236 505 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 B3GALT5Q9Y2C3 310 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 RPH3AQ9Y2J0 694 aaPredicted RBP2.72□□□□□ -1.97
XRN1-210ENST00000472697 EFCAB6Q5THR3 1501 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 SEC14L5O43304 696 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 TXNL1O43396 289 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 FAM20BO75063 409 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 ALDOAP04075 364 aaKnown RBP2.72□□□□□ -1.97
XRN1-210ENST00000472697 PRNPP04156 253 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 LCATP04180 440 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 ADRA2CP18825 462 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 CR2P20023 1033 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 ACHEP22303 614 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 PSMA4P25789 261 aaKnown RBP2.72□□□□□ -1.97
XRN1-210ENST00000472697 MAPK3P27361 379 aaPredicted RBP2.72□□□□□ -1.97
XRN1-210ENST00000472697 PBLDP30039 288 aaPredicted RBP2.72□□□□□ -1.97
XRN1-210ENST00000472697 GKP32189 559 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 PCP4P48539 62 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 ANXA11P50995 505 aaKnown RBP2.72□□□□□ -1.97
XRN1-210ENST00000472697 COPB1P53618 953 aaKnown RBP2.72□□□□□ -1.97
XRN1-210ENST00000472697 WDR5P61964 334 aaKnown RBP2.72□□□□□ -1.97
XRN1-210ENST00000472697 NIPAL4Q0D2K0 466 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 CRYMQ14894 314 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 VEPH1Q14D04 833 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 CEBPEQ15744 281 aa2.72□□□□□ -1.97
XRN1-210ENST00000472697 TYSND1Q2T9J0 566 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms