RNA–Protein interactions for RNA: ENST00000472564.1

LAMP1-203, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 2

Gene LAMP1, Length 5,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-203ENST00000472564 KCNU1A8MYU2 1149 aa17.23■□□□□ 0.35
LAMP1-203ENST00000472564 MSI1O43347 362 aaKnown RBP17.23■□□□□ 0.35
LAMP1-203ENST00000472564 WBP4O75554 376 aaKnown RBP17.23■□□□□ 0.35
LAMP1-203ENST00000472564 ZNF37AP17032 561 aaPredicted RBP17.23■□□□□ 0.35
LAMP1-203ENST00000472564 PAX3P23760 479 aa17.23■□□□□ 0.35
LAMP1-203ENST00000472564 FEN1P39748 380 aaKnown RBP17.23■□□□□ 0.35
LAMP1-203ENST00000472564 SPIRE1Q08AE8 756 aa17.23■□□□□ 0.35
LAMP1-203ENST00000472564 SLC35G1Q2M3R5 365 aa17.23■□□□□ 0.35
LAMP1-203ENST00000472564 ZNF781Q8N8C0 355 aa17.23■□□□□ 0.35
LAMP1-203ENST00000472564 SLC35B2Q8TB61 432 aa17.23■□□□□ 0.35
LAMP1-203ENST00000472564 C19orf60Q96EN9 201 aa17.23■□□□□ 0.35
LAMP1-203ENST00000472564 SLC27A5Q9Y2P5 690 aa17.23■□□□□ 0.35
LAMP1-203ENST00000472564 CNTNAP1P78357 1384 aa17.23■□□□□ 0.35
LAMP1-203ENST00000472564 TLR5O60602 858 aa17.23■□□□□ 0.35
LAMP1-203ENST00000472564 NOS3P29474 1203 aa17.23■□□□□ 0.35
LAMP1-203ENST00000472564 CDC42P60953 191 aa17.23■□□□□ 0.35
LAMP1-203ENST00000472564 USP39Q53GS9 565 aaKnown RBP17.23■□□□□ 0.35
LAMP1-203ENST00000472564 OR52E6Q96RD3 313 aa17.23■□□□□ 0.35
LAMP1-203ENST00000472564 AGO3Q9H9G7 860 aaKnown RBP17.23■□□□□ 0.35
LAMP1-203ENST00000472564 RPS6KB2Q9UBS0 482 aa17.23■□□□□ 0.35
LAMP1-203ENST00000472564 SAMHD1Q9Y3Z3 626 aaKnown RBP17.23■□□□□ 0.35
LAMP1-203ENST00000472564 CENPXA8MT69 81 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 PQBP1O60828 265 aaKnown RBP17.22■□□□□ 0.35
LAMP1-203ENST00000472564 RFX4Q33E94 735 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 SETMARQ53H47 684 aaPredicted RBP17.22■□□□□ 0.35
LAMP1-203ENST00000472564 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.22■□□□□ 0.35
LAMP1-203ENST00000472564 C10orf82Q8WW14 230 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 ATL1Q8WXF7 558 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 CD101Q93033 1021 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 OSBPL6Q9BZF3 934 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 GBA3Q9H227 469 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 ZDHHC6Q9H6R6 413 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 TK2O00142 265 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 CYP7B1O75881 506 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 HPGDP15428 266 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 PEX2P28328 305 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 CD52P31358 61 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 PRKCQQ04759 706 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 PEX6Q13608 980 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 PSMD5Q16401 504 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 ALFQ53S48 1182 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 RALGPS1Q5JS13 557 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 RFWD3Q6PCD5 774 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 ZYG11AQ6WRX3 759 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 MOB2Q70IA6 237 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 VN1R5Q7Z5H4 357 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 GPR142Q7Z601 462 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 OR2T12Q8NG77 320 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 ZNF317Q96PQ6 595 aaPredicted RBP17.22■□□□□ 0.35
LAMP1-203ENST00000472564 PANX1Q96RD7 426 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 MAGEL2Q9UJ55 1249 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 GTF2A1LQ9UNN4 478 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 SLC15A5A6NIM6 579 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 PLCL1Q15111 1095 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 NOMO2Q5JPE7 1267 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 ZNF57Q68EA5 555 aaPredicted RBP17.22■□□□□ 0.35
LAMP1-203ENST00000472564 CPSF7Q8N684 471 aaKnown RBP17.22■□□□□ 0.35
LAMP1-203ENST00000472564 ZHX1-C8orf76Q96EF9 292 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 MAPRE3Q9UPY8 281 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 MC4RP32245 332 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 SNRPD1P62314 119 aaKnown RBP17.22■□□□□ 0.35
LAMP1-203ENST00000472564 ACSBG2Q5FVE4 666 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 DET1Q7L5Y6 550 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 CHMP1BQ7LBR1 199 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 PROSER1Q86XN7 944 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 SPPL2CQ8IUH8 684 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 OR2T34Q8NGX1 318 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 OR2T3Q8NH03 318 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 TRPM4Q8TD43 1214 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 MRPL48Q96GC5 212 aaKnown RBP17.22■□□□□ 0.35
LAMP1-203ENST00000472564 TMPRSS4Q9NRS4 437 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 SPG21Q9NZD8 308 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 IKZF3Q9UKT9 509 aa17.22■□□□□ 0.35
LAMP1-203ENST00000472564 SF3B1O75533 1304 aaKnown RBP eCLIP17.21■□□□□ 0.357e-8■■■■■ 30.2
LAMP1-203ENST00000472564 CACNA1FO60840 1977 aa17.21■□□□□ 0.35
LAMP1-203ENST00000472564 RFXANKO14593 260 aa17.21■□□□□ 0.35
LAMP1-203ENST00000472564 ICAM3P32942 547 aa17.21■□□□□ 0.35
LAMP1-203ENST00000472564 MPP1Q00013 466 aa17.21■□□□□ 0.35
LAMP1-203ENST00000472564 LSM12Q3MHD2 195 aaKnown RBP17.21■□□□□ 0.35
LAMP1-203ENST00000472564 C6orf52Q5T4I8 152 aa17.21■□□□□ 0.35
LAMP1-203ENST00000472564 UBASH3BQ8TF42 649 aa17.21■□□□□ 0.35
LAMP1-203ENST00000472564 ATP13A3Q9H7F0 1226 aa17.21■□□□□ 0.35
LAMP1-203ENST00000472564 SYNDIG1Q9H7V2 258 aa17.21■□□□□ 0.35
LAMP1-203ENST00000472564 VNN1O95497 513 aa17.21■□□□□ 0.35
LAMP1-203ENST00000472564 CSH1P0DML2 217 aa17.21■□□□□ 0.35
LAMP1-203ENST00000472564 CSH2P0DML3 217 aa17.21■□□□□ 0.35
LAMP1-203ENST00000472564 DBTP11182 482 aaKnown RBP17.21■□□□□ 0.35
LAMP1-203ENST00000472564 HDCP19113 662 aa17.21■□□□□ 0.35
LAMP1-203ENST00000472564 SKIV2LQ15477 1246 aaKnown RBP17.21■□□□□ 0.35
LAMP1-203ENST00000472564 HDDC2Q7Z4H3 204 aa17.21■□□□□ 0.35
LAMP1-203ENST00000472564 PTCD2Q8WV60 388 aaKnown RBP17.21■□□□□ 0.35
LAMP1-203ENST00000472564 PCDH12Q9NPG4 1184 aa17.21■□□□□ 0.35
LAMP1-203ENST00000472564 ABCB10Q9NRK6 738 aa17.21■□□□□ 0.35
LAMP1-203ENST00000472564 EHD3Q9NZN3 535 aa17.21■□□□□ 0.35
LAMP1-203ENST00000472564 RAB26Q9ULW5 256 aa17.21■□□□□ 0.35
LAMP1-203ENST00000472564 PFKPQ01813 784 aa17.21■□□□□ 0.35
LAMP1-203ENST00000472564 DUSP28Q4G0W2 176 aa17.21■□□□□ 0.35
LAMP1-203ENST00000472564 GPR158Q5T848 1215 aa17.21■□□□□ 0.35
LAMP1-203ENST00000472564 SPATA22Q8NHS9 363 aa17.21■□□□□ 0.35
LAMP1-203ENST00000472564 PPM1MQ96MI6 270 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms