RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 L1CAMP32004 1257 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 UGT1A5P35504 534 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 SKIV2L2P42285 1042 aaKnown RBP4.5□□□□□ -1.69
LMNB1-205ENST00000472034 RXRGP48443 463 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 ARRB1P49407 418 aaPredicted RBP4.5□□□□□ -1.69
LMNB1-205ENST00000472034 BCAT1P54687 386 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 CORO7P57737 925 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 AP2B1P63010 937 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 CDK17Q00537 523 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 EXOSC10Q01780 885 aaKnown RBP4.5□□□□□ -1.69
LMNB1-205ENST00000472034 ROR2Q01974 943 aaKnown RBP4.5□□□□□ -1.69
LMNB1-205ENST00000472034 GAD2Q05329 585 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 SSRP1Q08945 709 aaKnown RBP4.5□□□□□ -1.69
LMNB1-205ENST00000472034 IFRD2Q12894 506 aaPredicted RBP4.5□□□□□ -1.69
LMNB1-205ENST00000472034 SP140Q13342 867 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 CUL4BQ13620 913 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 STARD3Q14849 445 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 NFE2Q16621 373 aaPredicted RBP4.5□□□□□ -1.69
LMNB1-205ENST00000472034 FAM187BQ17R55 369 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 DCAF4L1Q3SXM0 396 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 DCAF6Q58WW2 860 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 WLSQ5T9L3 541 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 FYB2Q5VWT5 728 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 KAZNQ674X7 775 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 GTF2IRD2BQ6EKJ0 949 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 THOC7Q6I9Y2 204 aaKnown RBP4.5□□□□□ -1.69
LMNB1-205ENST00000472034 HIBCHQ6NVY1 386 aaPredicted RBP4.5□□□□□ -1.69
LMNB1-205ENST00000472034 GUSBP11Q6P575 273 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 OLFML1Q6UWY5 402 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 ZPBP2Q6X784 338 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 DSTYKQ6XUX3 929 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 GBP6Q6ZN66 633 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 RBM44Q6ZP01 1051 aaKnown RBP4.5□□□□□ -1.69
LMNB1-205ENST00000472034 RAPH1Q70E73 1250 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 Q71RC1 249 aaPredicted RBP4.5□□□□□ -1.69
LMNB1-205ENST00000472034 ARHGAP22Q7Z5H3 698 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 GTF2IRD2Q86UP8 949 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 BBS7Q8IWZ6 715 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 CELF2-AS1Q8N7Q2 184 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 ZNF713Q8N859 430 aaPredicted RBP4.5□□□□□ -1.69
LMNB1-205ENST00000472034 ZNF366Q8N895 744 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 C3orf20Q8ND61 904 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 TNIP2Q8NFZ5 429 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 OR4C6Q8NH72 309 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 B4GALNT2Q8NHY0 566 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 WDR36Q8NI36 951 aaKnown RBP4.5□□□□□ -1.69
LMNB1-205ENST00000472034 KIF18AQ8NI77 898 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 ETNPPLQ8TBG4 499 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 IFI44Q8TCB0 444 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 CCHCR1Q8TD31 782 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 SCFD1Q8WVM8 642 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 SORCS1Q8WY21 1168 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 SGCDQ92629 289 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 ZNF669Q96BR6 464 aaPredicted RBP4.5□□□□□ -1.69
LMNB1-205ENST00000472034 DYDC2Q96IM9 177 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 APOLD1Q96LR9 279 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 ADPGKQ9BRR6 497 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 G6PC3Q9BUM1 346 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 PANK2Q9BZ23 570 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 PCED1AQ9H1Q7 454 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 POLD4Q9HCU8 107 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 CRTAC1Q9NQ79 661 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 SPTLC3Q9NUV7 552 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 SLC38A7Q9NVC3 462 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 BARHL2Q9NY43 387 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 HSFX1Q9UBD0 423 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 LRWD1Q9UFC0 647 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 MCM8Q9UJA3 840 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 ZNF148Q9UQR1 794 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 C2CD2Q9Y426 696 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 PCDHGA7Q9Y5G6 932 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 SCN8AQ9UQD0 1980 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 CITO14578 2027 aa4.5□□□□□ -1.69
LMNB1-205ENST00000472034 A0A087WUV0 522 aaPredicted RBP4.49□□□□□ -1.69
LMNB1-205ENST00000472034 CCDC187A0A096LP49 1063 aa4.49□□□□□ -1.69
LMNB1-205ENST00000472034 PRAMEF33A0A0G2JMD5 474 aa4.49□□□□□ -1.69
LMNB1-205ENST00000472034 A0A1W2PPC4 97 aa4.49□□□□□ -1.69
LMNB1-205ENST00000472034 CPED1A4D0V7 1026 aa4.49□□□□□ -1.69
LMNB1-205ENST00000472034 TMEM200CA6NKL6 621 aa4.49□□□□□ -1.69
LMNB1-205ENST00000472034 NEDD8-MDP1E9PL57 170 aa4.49□□□□□ -1.69
LMNB1-205ENST00000472034 TLR4O00206 839 aa4.49□□□□□ -1.69
LMNB1-205ENST00000472034 ACKR2O00590 384 aa4.49□□□□□ -1.69
LMNB1-205ENST00000472034 PLD2O14939 933 aa4.49□□□□□ -1.69
LMNB1-205ENST00000472034 YKT6O15498 198 aa4.49□□□□□ -1.69
LMNB1-205ENST00000472034 NKX2-8O15522 239 aa4.49□□□□□ -1.69
LMNB1-205ENST00000472034 SULT1B1O43704 296 aa4.49□□□□□ -1.69
LMNB1-205ENST00000472034 IDH3BO43837 385 aa4.49□□□□□ -1.69
LMNB1-205ENST00000472034 PSPNO60542 156 aa4.49□□□□□ -1.69
LMNB1-205ENST00000472034 USO1O60763 962 aaKnown RBP4.49□□□□□ -1.69
LMNB1-205ENST00000472034 PRAMEF10O60809 474 aa4.49□□□□□ -1.69
LMNB1-205ENST00000472034 ATP6V1G1O75348 118 aa4.49□□□□□ -1.69
LMNB1-205ENST00000472034 FAM155BO75949 473 aa4.49□□□□□ -1.69
LMNB1-205ENST00000472034 URI1O94763 535 aaPredicted RBP4.49□□□□□ -1.69
LMNB1-205ENST00000472034 SLITRK3O94933 977 aa4.49□□□□□ -1.69
LMNB1-205ENST00000472034 C4BPAP04003 597 aaKnown RBP4.49□□□□□ -1.69
LMNB1-205ENST00000472034 CYP1A2P05177 515 aa4.49□□□□□ -1.69
LMNB1-205ENST00000472034 CYP21A2P08686 494 aa4.49□□□□□ -1.69
LMNB1-205ENST00000472034 CISD3P0C7P0 127 aa4.49□□□□□ -1.69
LMNB1-205ENST00000472034 CSH1P0DML2 217 aa4.49□□□□□ -1.69
LMNB1-205ENST00000472034 CSH2P0DML3 217 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms