RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 SSC4DQ8WTU2 575 aa19.07■□□□□ 0.64
SORT1-203ENST00000471996 NELFBQ8WX92 580 aa19.07■□□□□ 0.64
SORT1-203ENST00000471996 STARD8Q92502 1023 aa19.07■□□□□ 0.64
SORT1-203ENST00000471996 RTP4Q96DX8 246 aa19.07■□□□□ 0.64
SORT1-203ENST00000471996 DPYSL5Q9BPU6 564 aa19.07■□□□□ 0.64
SORT1-203ENST00000471996 NCAPGQ9BPX3 1015 aa19.07■□□□□ 0.64
SORT1-203ENST00000471996 LGR4Q9BXB1 951 aa19.07■□□□□ 0.64
SORT1-203ENST00000471996 TMEM59LQ9UK28 342 aa19.07■□□□□ 0.64
SORT1-203ENST00000471996 VPS4AQ9UN37 437 aa19.07■□□□□ 0.64
SORT1-203ENST00000471996 NEU3Q9UQ49 428 aa19.07■□□□□ 0.64
SORT1-203ENST00000471996 ATP8A1Q9Y2Q0 1164 aa19.07■□□□□ 0.64
SORT1-203ENST00000471996 IGHV1OR21-1A0A087WYE8 117 aa19.06■□□□□ 0.64
SORT1-203ENST00000471996 BICDL2A1A5D9 508 aa19.06■□□□□ 0.64
SORT1-203ENST00000471996 PRSS38A1L453 326 aa19.06■□□□□ 0.64
SORT1-203ENST00000471996 FAM72CH0Y354 149 aa19.06■□□□□ 0.64
SORT1-203ENST00000471996 K7EM74 188 aa19.06■□□□□ 0.64
SORT1-203ENST00000471996 RECQL5O94762 991 aaPredicted RBP19.06■□□□□ 0.64
SORT1-203ENST00000471996 NR1D1P20393 614 aa19.06■□□□□ 0.64
SORT1-203ENST00000471996 CSF2RBP32927 897 aa19.06■□□□□ 0.64
SORT1-203ENST00000471996 ADRA1BP35368 520 aa19.06■□□□□ 0.64
SORT1-203ENST00000471996 CLCN1P35523 988 aa19.06■□□□□ 0.64
SORT1-203ENST00000471996 ABHD18Q0P651 414 aa19.06■□□□□ 0.64
SORT1-203ENST00000471996 BIRC2Q13490 618 aa19.06■□□□□ 0.64
SORT1-203ENST00000471996 FAM72AQ5TYM5 149 aa19.06■□□□□ 0.64
SORT1-203ENST00000471996 FAM72DQ6L9T8 149 aa19.06■□□□□ 0.64
SORT1-203ENST00000471996 TCTN3Q6NUS6 607 aa19.06■□□□□ 0.64
SORT1-203ENST00000471996 BRAT1Q6PJG6 821 aa19.06■□□□□ 0.64
SORT1-203ENST00000471996 TIPARPQ7Z3E1 657 aaKnown RBP19.06■□□□□ 0.64
SORT1-203ENST00000471996 FAM72BQ86X60 149 aa19.06■□□□□ 0.64
SORT1-203ENST00000471996 ZNF354CQ86Y25 554 aa19.06■□□□□ 0.64
SORT1-203ENST00000471996 TMEM35BQ8NCS4 154 aa19.06■□□□□ 0.64
SORT1-203ENST00000471996 GSDMCQ9BYG8 508 aa19.06■□□□□ 0.64
SORT1-203ENST00000471996 PRDM8Q9NQV8 689 aa19.06■□□□□ 0.64
SORT1-203ENST00000471996 TMEM9Q9P0T7 183 aa19.06■□□□□ 0.64
SORT1-203ENST00000471996 TAAR2Q9P1P5 351 aa19.06■□□□□ 0.64
SORT1-203ENST00000471996 LHX3Q9UBR4 397 aa19.06■□□□□ 0.64
SORT1-203ENST00000471996 ZDHHC9Q9Y397 364 aa19.06■□□□□ 0.64
SORT1-203ENST00000471996 KCTD3Q9Y597 815 aa19.06■□□□□ 0.64
SORT1-203ENST00000471996 PDE2AO00408 941 aaPredicted RBP19.05■□□□□ 0.64
SORT1-203ENST00000471996 PPM1DO15297 605 aa19.05■□□□□ 0.64
SORT1-203ENST00000471996 LRIG2O94898 1065 aa19.05■□□□□ 0.64
SORT1-203ENST00000471996 PRKCGP05129 697 aa19.05■□□□□ 0.64
SORT1-203ENST00000471996 TCN2P20062 427 aa19.05■□□□□ 0.64
SORT1-203ENST00000471996 BMP6P22004 513 aa19.05■□□□□ 0.64
SORT1-203ENST00000471996 GNLYP22749 145 aa19.05■□□□□ 0.64
SORT1-203ENST00000471996 CDH5P33151 784 aaPredicted RBP19.05■□□□□ 0.64
SORT1-203ENST00000471996 GRM3Q14832 879 aa19.05■□□□□ 0.64
SORT1-203ENST00000471996 ATP1A1-AS1Q5TC04 95 aa19.05■□□□□ 0.64
SORT1-203ENST00000471996 C16orf46Q6P387 395 aa19.05■□□□□ 0.64
SORT1-203ENST00000471996 TMEM71Q6P5X7 295 aa19.05■□□□□ 0.64
SORT1-203ENST00000471996 ZSWIM9Q86XI8 627 aa19.05■□□□□ 0.64
SORT1-203ENST00000471996 DNAAF5Q86Y56 855 aa19.05■□□□□ 0.64
SORT1-203ENST00000471996 HSCBQ8IWL3 235 aa19.05■□□□□ 0.64
SORT1-203ENST00000471996 GALNT11Q8NCW6 608 aa19.05■□□□□ 0.64
SORT1-203ENST00000471996 PATE1Q8WXA2 126 aa19.05■□□□□ 0.64
SORT1-203ENST00000471996 TBC1D31Q96DN5 1066 aa19.05■□□□□ 0.64
SORT1-203ENST00000471996 EXOC2Q96KP1 924 aa19.05■□□□□ 0.64
SORT1-203ENST00000471996 ZNF641Q96N77 438 aaPredicted RBP19.05■□□□□ 0.64
SORT1-203ENST00000471996 KLC2Q9H0B6 622 aa19.05■□□□□ 0.64
SORT1-203ENST00000471996 WDR26Q9H7D7 661 aa19.05■□□□□ 0.64
SORT1-203ENST00000471996 CARS2Q9HA77 564 aaKnown RBP19.05■□□□□ 0.64
SORT1-203ENST00000471996 KCNMB2Q9Y691 235 aa19.05■□□□□ 0.64
SORT1-203ENST00000471996 PPP1R3GB7ZBB8 358 aa19.04■□□□□ 0.64
SORT1-203ENST00000471996 GOLGA8SH3BPF8 625 aa19.04■□□□□ 0.64
SORT1-203ENST00000471996 MKRN2OSH3BPM6 223 aa19.04■□□□□ 0.64
SORT1-203ENST00000471996 ATP11AP98196 1134 aa19.04■□□□□ 0.64
SORT1-203ENST00000471996 ILF3Q12906 894 aaKnown RBP eCLIP19.04■□□□□ 0.641e-8■■□□□ 14.2
SORT1-203ENST00000471996 CYTH1Q15438 398 aa19.04■□□□□ 0.64
SORT1-203ENST00000471996 RAB6CQ53S08 254 aa19.04■□□□□ 0.64
SORT1-203ENST00000471996 CFAP58Q5T655 872 aa19.04■□□□□ 0.64
SORT1-203ENST00000471996 ARCQ7LC44 396 aa19.04■□□□□ 0.64
SORT1-203ENST00000471996 CCDC13Q8IYE1 715 aa19.04■□□□□ 0.64
SORT1-203ENST00000471996 MAGEB5Q9BZ81 275 aa19.04■□□□□ 0.64
SORT1-203ENST00000471996 RAB6CQ9H0N0 254 aa19.04■□□□□ 0.64
SORT1-203ENST00000471996 NOL6Q9H6R4 1146 aaKnown RBP19.04■□□□□ 0.64
SORT1-203ENST00000471996 TRNAU1APQ9NX07 287 aaKnown RBP19.04■□□□□ 0.64
SORT1-203ENST00000471996 PDP2Q9P2J9 529 aa19.04■□□□□ 0.64
SORT1-203ENST00000471996 MAN1B1Q9UKM7 699 aa19.04■□□□□ 0.64
SORT1-203ENST00000471996 TMEM184BQ9Y519 407 aaPredicted RBP19.04■□□□□ 0.64
SORT1-203ENST00000471996 FOXN3O00409 490 aaPredicted RBP19.03■□□□□ 0.64
SORT1-203ENST00000471996 COPB1P53618 953 aaKnown RBP19.03■□□□□ 0.64
SORT1-203ENST00000471996 MC2RQ01718 297 aa19.03■□□□□ 0.64
SORT1-203ENST00000471996 RALGDSQ12967 914 aa19.03■□□□□ 0.64
SORT1-203ENST00000471996 C2CD6Q53TS8 623 aa19.03■□□□□ 0.64
SORT1-203ENST00000471996 PNCKQ6P2M8 343 aa19.03■□□□□ 0.64
SORT1-203ENST00000471996 LIPIQ6XZB0 460 aa19.03■□□□□ 0.64
SORT1-203ENST00000471996 GBP6Q6ZN66 633 aa19.03■□□□□ 0.64
SORT1-203ENST00000471996 ASB18Q6ZVZ8 466 aa19.03■□□□□ 0.64
SORT1-203ENST00000471996 KDELC2Q7Z4H8 507 aa19.03■□□□□ 0.64
SORT1-203ENST00000471996 HEATR4Q86WZ0 1026 aa19.03■□□□□ 0.64
SORT1-203ENST00000471996 NAGSQ8N159 534 aa19.03■□□□□ 0.64
SORT1-203ENST00000471996 CTRCQ99895 268 aa19.03■□□□□ 0.64
SORT1-203ENST00000471996 ZPBPQ9BS86 351 aa19.03■□□□□ 0.64
SORT1-203ENST00000471996 PDCL3Q9H2J4 239 aa19.03■□□□□ 0.64
SORT1-203ENST00000471996 TRIT1Q9H3H1 467 aaKnown RBP19.03■□□□□ 0.64
SORT1-203ENST00000471996 SUDS3Q9H7L9 328 aaPredicted RBP19.03■□□□□ 0.64
SORT1-203ENST00000471996 GDPD2Q9HCC8 539 aa19.03■□□□□ 0.64
SORT1-203ENST00000471996 AJAP1Q9UKB5 411 aaPredicted RBP19.03■□□□□ 0.64
SORT1-203ENST00000471996 CTNND2Q9UQB3 1225 aa19.03■□□□□ 0.64
SORT1-203ENST00000471996 ITPR2Q14571 2701 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms