RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 CENPHQ9H3R5 247 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 PLAC1Q9HBJ0 212 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 TREX1Q9NSU2 369 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 SYBUQ9NX95 663 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 ZFATQ9P243 1243 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 TXNDC16Q9P2K2 825 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 CORO1CQ9ULV4 474 aaPredicted RBP9.21□□□□□ -0.94
PTPRE-207ENST00000471218 TICRRQ7Z2Z1 1910 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 KHNYNO15037 678 aaKnown RBP9.2□□□□□ -0.94
PTPRE-207ENST00000471218 SLC7A4O43246 635 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 TSPAN3O60637 253 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 PMPCBO75439 489 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 ZWINTO95229 277 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 CRTAMO95727 393 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 CD160O95971 181 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 IGSF6O95976 241 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 MT-CYBP00156 380 aaPredicted RBP9.2□□□□□ -0.94
PTPRE-207ENST00000471218 SRPRAP08240 638 aaKnown RBP9.2□□□□□ -0.94
PTPRE-207ENST00000471218 ATXN1LP0C7T5 689 aaKnown RBP9.2□□□□□ -0.94
PTPRE-207ENST00000471218 PABPC1P11940 636 aaKnown RBP9.2□□□□□ -0.94
PTPRE-207ENST00000471218 CEACAM1P13688 526 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 KRT15P19012 456 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 CSKP41240 450 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 GRIA4P48058 902 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 ITKQ08881 620 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 LMAN2Q12907 356 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 SRSF5Q13243 272 aaKnown RBP9.2□□□□□ -0.94
PTPRE-207ENST00000471218 SF3A2Q15428 464 aaKnown RBP9.2□□□□□ -0.94
PTPRE-207ENST00000471218 CYTH1Q15438 398 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 SKIDA1Q1XH10 827 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 PLK5Q496M5 336 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 HSF5Q4G112 596 aaPredicted RBP9.2□□□□□ -0.94
PTPRE-207ENST00000471218 GRTP1Q5TC63 336 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 KBTBD6Q86V97 674 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 RAVER1Q8IY67 606 aaKnown RBP9.2□□□□□ -0.94
PTPRE-207ENST00000471218 ADGRG2Q8IZP9 1017 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 MPP5Q8N3R9 675 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 PGBD5Q8N414 524 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 TAB3Q8N5C8 712 aaPredicted RBP9.2□□□□□ -0.94
PTPRE-207ENST00000471218 SH2D3CQ8N5H7 860 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 NETO2Q8NC67 525 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 OR52K2Q8NGK3 314 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 BRSK1Q8TDC3 778 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 HCAR2Q8TDS4 363 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 USP33Q8TEY7 942 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 MZB1Q8WU39 189 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 LRRN4Q8WUT4 740 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 RSPRY1Q96DX4 576 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 LRIG1Q96JA1 1093 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 ZFYVE19Q96K21 471 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 CABS1Q96KC9 395 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 BBS2Q9BXC9 721 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 TDRD1Q9BXT4 1180 aaKnown RBP9.2□□□□□ -0.94
PTPRE-207ENST00000471218 CPEB1Q9BZB8 566 aaKnown RBP9.2□□□□□ -0.94
PTPRE-207ENST00000471218 ATP13A3Q9H7F0 1226 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 SCUBE2Q9NQ36 999 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 BCCIPQ9P287 314 aaKnown RBP eCLIP9.2□□□□□ -0.94
PTPRE-207ENST00000471218 SLC25A13Q9UJS0 675 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 GGA2Q9UJY4 613 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 CCL26Q9Y258 94 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 VPS9D1Q9Y2B5 631 aa9.2□□□□□ -0.94
PTPRE-207ENST00000471218 HELZP42694 1942 aaKnown RBP9.2□□□□□ -0.94
PTPRE-207ENST00000471218 FAM47DPA6NHR8 397 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.19□□□□□ -0.94
PTPRE-207ENST00000471218 WASH3PC4AMC7 463 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 POC1B-GALNT4F8VUJ3 575 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 NRG2O14511 850 aaPredicted RBP9.19□□□□□ -0.94
PTPRE-207ENST00000471218 NPC1O15118 1278 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 POLR3GO15318 223 aaPredicted RBP9.19□□□□□ -0.94
PTPRE-207ENST00000471218 HTRA2O43464 458 aaPredicted RBP9.19□□□□□ -0.94
PTPRE-207ENST00000471218 ATP9BO43861 1147 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 FZD6O60353 706 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 BANF1O75531 89 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 MT-ND3P03897 115 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 ATP5BP06576 529 aaKnown RBP9.19□□□□□ -0.94
PTPRE-207ENST00000471218 ADH5P11766 374 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 TYRP14679 529 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 CSRP1P21291 193 aaKnown RBP9.19□□□□□ -0.94
PTPRE-207ENST00000471218 MZF1P28698 734 aaPredicted RBP9.19□□□□□ -0.94
PTPRE-207ENST00000471218 SPRP35270 261 aaPredicted RBP9.19□□□□□ -0.94
PTPRE-207ENST00000471218 MDH1P40925 334 aaKnown RBP9.19□□□□□ -0.94
PTPRE-207ENST00000471218 CCNFP41002 786 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 SLCO1A2P46721 670 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 GALK1P51570 392 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 RHOAP61586 193 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 SNRPD1P62314 119 aaKnown RBP9.19□□□□□ -0.94
PTPRE-207ENST00000471218 DSC2Q02487 901 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 CREB5Q02930 508 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 SLC18A2Q05940 514 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 RAD51Q06609 339 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 MSLNQ13421 630 aaPredicted RBP9.19□□□□□ -0.94
PTPRE-207ENST00000471218 TMED2Q15363 201 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 EML3Q32P44 896 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 FSCBQ5H9T9 825 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 PITRM1Q5JRX3 1037 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 TSTD2Q5T7W7 516 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 ZDHHC20Q5W0Z9 365 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 KCTD16Q68DU8 428 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 NCEH1Q6PIU2 408 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 NUDT18Q6ZVK8 323 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms