RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 MEA1Q16626 185 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 DEFB109BQ30KR1 87 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 ZNF805Q5CZA5 627 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 DCAF17Q5H9S7 520 aaPredicted RBP8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 EFHC2Q5JST6 749 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 EFHC1Q5JVL4 640 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 CCDC122Q5T0U0 273 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 CERCAMQ5T4B2 595 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 DCAF12Q5T6F0 453 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 OGFOD3Q6PK18 319 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 LINGO4Q6UY18 593 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 ZNF783Q6ZMS7 281 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 ZNF662Q6ZS27 426 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 TAF8Q7Z7C8 310 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 TMEM110Q86TL2 294 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 TTC7BQ86TV6 843 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 CCDC170Q8IYT3 715 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 TXLNBQ8N3L3 684 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 RYBPQ8N488 228 aaPredicted RBP8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 UBR7Q8N806 425 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 FAM46DQ8NEK8 389 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 NT5C1BQ96P26 610 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 EIF3CQ99613 913 aaKnown RBP8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 DPYSL5Q9BPU6 564 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 SPON2Q9BUD6 331 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 DDA1Q9BW61 102 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 OSBPL1AQ9BXW6 950 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 FUT8Q9BYC5 575 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 TSGA10Q9BZW7 698 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 SEMA6CQ9H3T2 930 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 GPN2Q9H9Y4 310 aaPredicted RBP8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 SLC39A1Q9NY26 324 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 TRIM10Q9UDY6 481 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 KLQ9UEF7 1012 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 PNMA8BQ9ULN7 279 aaPredicted RBP8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 RP1L1Q8IWN7 2480 aaPredicted RBP8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 ABCA12Q86UK0 2595 aa8.99□□□□□ -0.97
SYNGAP1-205ENST00000470232 LRBAP50851 2863 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 CXorf51AA0A1B0GTR3 108 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 ILVBLA1L0T0 632 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 RHPN2P1A8MT19 583 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 RNF103O00237 685 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 MAP2K7O14733 419 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 NKX2-8O15522 239 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 RAD1O60671 282 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 MMP20O60882 483 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 POP4O95707 220 aaKnown RBP8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 PRKAR1AP10644 381 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 CCL4P13236 92 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 MCM3P25205 808 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 OR1E1P30953 314 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 KLK7P49862 253 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 SERPINH1P50454 418 aaKnown RBP8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 SNX16P57768 344 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 RAB15P59190 212 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 RAD51Q06609 339 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 CDC20Q12834 499 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 NME3Q13232 169 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 BIRC2Q13490 618 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 NFATC4Q14934 902 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 C16orf72Q14CZ0 275 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 LRRC14Q15048 493 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 POLD3Q15054 466 aaPredicted RBP8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 SPA17Q15506 151 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 AMZ1Q400G9 498 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 CBWD6Q4V339 395 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 C14orf28Q4W4Y0 310 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 CRTC2Q53ET0 693 aaPredicted RBP8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 FIGNQ5HY92 759 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 CBWD3Q5JTY5 395 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 CBWD5Q5RIA9 395 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 BEND6Q5SZJ8 279 aaPredicted RBP8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 CAPRIN2Q6IMN6 1127 aaKnown RBP8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 TCTN3Q6NUS6 607 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 WDR59Q6PJI9 974 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 DEFB106AQ8N104 65 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 PPM1KQ8N3J5 372 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 AGBL5Q8NDL9 886 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 ISG20Q96AZ6 181 aaKnown RBP8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 TEFMQ96QE5 360 aaKnown RBP8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 ERGIC2Q96RQ1 377 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 RBM15Q96T37 977 aaKnown RBP eCLIP8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 APOOQ9BUR5 198 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 SLC4A5Q9BY07 1137 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 TTYH3Q9C0H2 523 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 TRIT1Q9H3H1 467 aaKnown RBP8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 DPEP2Q9H4A9 486 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 WDCPQ9H6R7 721 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 NHEJ1Q9H9Q4 299 aaPredicted RBP8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 ASNSD1Q9NWL6 643 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 RRN3Q9NYV6 651 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 KCTD3Q9Y597 815 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 PCDHB3Q9Y5E6 796 aa8.98□□□□□ -0.97
SYNGAP1-205ENST00000470232 SDK2Q58EX2 2172 aa8.97□□□□□ -0.97
SYNGAP1-205ENST00000470232 SPENQ96T58 3664 aaKnown RBP8.97□□□□□ -0.97
SYNGAP1-205ENST00000470232 A0A0D9SEW6 157 aa8.97□□□□□ -0.97
SYNGAP1-205ENST00000470232 TTLL8A6PVC2 850 aa8.97□□□□□ -0.97
SYNGAP1-205ENST00000470232 E5RJQ4 531 aa8.97□□□□□ -0.97
SYNGAP1-205ENST00000470232 H3BQF6 201 aa8.97□□□□□ -0.97
SYNGAP1-205ENST00000470232 SLC16A3O15427 465 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms