RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 LRRC1Q9BTT6 524 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 TRIM31Q9BZY9 425 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 PREBQ9HCU5 417 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 EIF2B3Q9NR50 452 aaKnown RBP14.83□□□□□ -0.04
COL9A3-209ENST00000469852 SHOC2Q9UQ13 582 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 SDK1Q7Z5N4 2213 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 GOLGA6CA6NDK9 693 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 GOLGA6BA6NDN3 693 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 IGLON5A6NGN9 336 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 ERI2A8K979 691 aaKnown RBP14.82□□□□□ -0.04
COL9A3-209ENST00000469852 DNALI1O14645 258 aaPredicted RBP14.82□□□□□ -0.04
COL9A3-209ENST00000469852 TP73O15350 636 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 PSMD3O43242 534 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 MAP3K13O43283 966 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 TSPAN6O43657 245 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 HEXIM1O94992 359 aaKnown RBP14.82□□□□□ -0.04
COL9A3-209ENST00000469852 FSBPO95073 299 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 CLDN7O95471 211 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 FGF1P05230 155 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 C1SP09871 688 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 GOLGA6DP0CG33 693 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 TPH1P17752 444 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 TPSB2P20231 275 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 ADCY8P40145 1251 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 MAGEA6P43360 314 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 RPL21P46778 160 aaKnown RBP14.82□□□□□ -0.04
COL9A3-209ENST00000469852 LMAN1P49257 510 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 SUOXP51687 545 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 SLC7A5Q01650 507 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 CCDC15Q0P6D6 951 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 MTM1Q13496 603 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 TPSAB1Q15661 275 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 LPAL2Q16609 132 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 ZNF284Q2VY69 593 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 RNASEH2BQ5TBB1 312 aaKnown RBP14.82□□□□□ -0.04
COL9A3-209ENST00000469852 IZUMO3Q5VZ72 239 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 LRRC66Q68CR7 880 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 PMS2CLQ68D20 193 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 DENND2CQ68D51 928 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 SLC36A4Q6YBV0 504 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 KDM7AQ6ZMT4 941 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 RFLNAQ6ZTI6 216 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 CEP68Q76N32 757 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 LYSMD3Q7Z3D4 306 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 TRIM69Q86WT6 500 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 HORMAD1Q86X24 394 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 CBARPQ8N350 705 aaPredicted RBP14.82□□□□□ -0.04
COL9A3-209ENST00000469852 CEP112Q8N8E3 955 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 NAT8LQ8N9F0 302 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 MNS1Q8NEH6 495 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 HSPA12BQ96MM6 686 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 LYSMD1Q96S90 227 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 ORAI3Q9BRQ5 295 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 DPH5Q9H2P9 285 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 KDM4CQ9H3R0 1056 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 ARNT2Q9HBZ2 717 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 CASS4Q9NQ75 786 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 GOLGA6AQ9NYA3 693 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.82□□□□□ -0.04
COL9A3-209ENST00000469852 ZNF711Q9Y462 761 aa14.82□□□□□ -0.04
COL9A3-209ENST00000469852 FAM187AA6NFU0 413 aa14.81□□□□□ -0.04
COL9A3-209ENST00000469852 METTL12A8MUP2 240 aa14.81□□□□□ -0.04
COL9A3-209ENST00000469852 EFCAB8A8MWE9 144 aa14.81□□□□□ -0.04
COL9A3-209ENST00000469852 GOLGA8MH3BSY2 632 aa14.81□□□□□ -0.04
COL9A3-209ENST00000469852 LATO43561 262 aa14.81□□□□□ -0.04
COL9A3-209ENST00000469852 ELFN1P0C7U0 828 aa14.81□□□□□ -0.04
COL9A3-209ENST00000469852 CYP2A6P11509 494 aaPredicted RBP14.81□□□□□ -0.04
COL9A3-209ENST00000469852 C6P13671 934 aa14.81□□□□□ -0.04
COL9A3-209ENST00000469852 MAOBP27338 520 aa14.81□□□□□ -0.04
COL9A3-209ENST00000469852 CNR2P34972 360 aa14.81□□□□□ -0.04
COL9A3-209ENST00000469852 PTSQ03393 145 aa14.81□□□□□ -0.04
COL9A3-209ENST00000469852 SIM2Q14190 667 aaPredicted RBP14.81□□□□□ -0.04
COL9A3-209ENST00000469852 TRADDQ15628 312 aa14.81□□□□□ -0.04
COL9A3-209ENST00000469852 CERCAMQ5T4B2 595 aa14.81□□□□□ -0.04
COL9A3-209ENST00000469852 NAPEPLDQ6IQ20 393 aa14.81□□□□□ -0.04
COL9A3-209ENST00000469852 C8orf74Q6P047 294 aa14.81□□□□□ -0.04
COL9A3-209ENST00000469852 PRR23BQ6ZRT6 265 aa14.81□□□□□ -0.04
COL9A3-209ENST00000469852 MICALCLQ6ZW33 695 aa14.81□□□□□ -0.04
COL9A3-209ENST00000469852 MAATS1Q7Z4T9 603 aa14.81□□□□□ -0.04
COL9A3-209ENST00000469852 HSD11B1LQ7Z5J1 315 aa14.81□□□□□ -0.04
COL9A3-209ENST00000469852 TTC30BQ8N4P2 665 aa14.81□□□□□ -0.04
COL9A3-209ENST00000469852 CADM4Q8NFZ8 388 aa14.81□□□□□ -0.04
COL9A3-209ENST00000469852 BLOC1S5Q8TDH9 187 aa14.81□□□□□ -0.04
COL9A3-209ENST00000469852 CXorf40AQ8TE69 158 aa14.81□□□□□ -0.04
COL9A3-209ENST00000469852 ERP44Q9BS26 406 aa14.81□□□□□ -0.04
COL9A3-209ENST00000469852 FZD3Q9NPG1 666 aa14.81□□□□□ -0.04
COL9A3-209ENST00000469852 TPX2Q9ULW0 747 aaKnown RBP14.81□□□□□ -0.04
COL9A3-209ENST00000469852 SNX24Q9Y343 169 aa14.81□□□□□ -0.04
COL9A3-209ENST00000469852 KCTD3Q9Y597 815 aa14.81□□□□□ -0.04
COL9A3-209ENST00000469852 GON4LQ3T8J9 2241 aa14.8□□□□□ -0.04
COL9A3-209ENST00000469852 C1orf232A0A0U1RR37 186 aa14.8□□□□□ -0.04
COL9A3-209ENST00000469852 WNT9AO14904 365 aa14.8□□□□□ -0.04
COL9A3-209ENST00000469852 RAD51BO15315 384 aa14.8□□□□□ -0.04
COL9A3-209ENST00000469852 BUD23O43709 281 aaKnown RBP14.8□□□□□ -0.04
COL9A3-209ENST00000469852 AVILO75366 819 aa14.8□□□□□ -0.04
COL9A3-209ENST00000469852 SLC4A1P02730 911 aa14.8□□□□□ -0.04
COL9A3-209ENST00000469852 CCR5P51681 352 aa14.8□□□□□ -0.04
COL9A3-209ENST00000469852 RPS21P63220 83 aaKnown RBP14.8□□□□□ -0.04
COL9A3-209ENST00000469852 PTPRCAPQ14761 206 aa14.8□□□□□ -0.04
COL9A3-209ENST00000469852 DUPD1Q68J44 220 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms