RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 GEN1Q17RS7 908 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 ERFEQ4G0M1 354 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 CATSPEREQ5SY80 951 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 ARHGEF16Q5VV41 709 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 VN1R5Q7Z5H4 357 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 CLEC10AQ8IUN9 316 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 CACTIN-AS1Q8N1I8 211 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 PLD6Q8N2A8 252 aaKnown RBP9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 MINDY1Q8N5J2 469 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 KDM1BQ8NB78 822 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 SMG8Q8ND04 991 aaKnown RBP9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 MCFD2Q8NI22 146 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 ZNF566Q969W8 418 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 NXNL1Q96CM4 212 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 NODALQ96S42 347 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 DGCR6LQ9BY27 220 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 ACOXLQ9NUZ1 547 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 OSGIN1Q9UJX0 560 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 PSAT1Q9Y617 370 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 ZFC3H1O60293 1989 aaKnown RBP9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 AGAP5A6NIR3 686 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 H0Y626 953 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 TBX1O43435 398 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 B4GAT1O43505 415 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 TBC1D4O60343 1298 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 XYLBO75191 536 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 SUPT7LO94864 414 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 ARHGEF15O94989 841 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 VNN1O95497 513 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 GSTM1P09488 218 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 SPNP16150 400 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 ACVR2AP27037 513 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 CDH6P55285 790 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 GJA9P57773 515 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 PRKCDQ05655 676 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 FADDQ13158 208 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 DAG1Q14118 895 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 ZBTB41Q5SVQ8 909 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 SLC39A4Q6P5W5 647 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 C15orf52Q6ZUT6 534 aaKnown RBP9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 PAGE2Q7Z2X7 111 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 WDR49Q8IV35 697 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 PLD5Q8N7P1 536 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 PSD4Q8NDX1 1056 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 CHDHQ8NE62 594 aaPredicted RBP9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 HMGCLL1Q8TB92 370 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 PIK3R3Q92569 461 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 CERS2Q96G23 380 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 FEM1AQ9BSK4 669 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 APOBEC3GQ9HC16 384 aaKnown RBP9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 NYAP2Q9P242 653 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 TNFRSF10DQ9UBN6 386 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 SLCO3A1Q9UIG8 710 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 SIP14410 1827 aa9.05□□□□□ -0.96
SMARCE1-207ENST00000469334 PCM1Q15154 2024 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 QSER1Q2KHR3 1735 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 A0A1W2PQ72 361 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 UNCXA6NJT0 531 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 H0Y858 1186 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 hCG_2039718K7EN88 272 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 NME4O00746 187 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 ARPC2O15144 300 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 MRPS14O60783 128 aaKnown RBP9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 KATNA1O75449 491 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 POLBP06746 335 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 TNNI1P19237 187 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 IL4RP24394 825 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 UGT2B10P36537 528 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 NDST1P52848 882 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 ARSFP54793 590 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 BCAR1P56945 870 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 SRP54P61011 504 aaKnown RBP9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 YWHAEP62258 255 aaKnown RBP9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 DPY19L1Q2PZI1 675 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 ESCO2Q56NI9 601 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 TMEM236Q5W0B7 351 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 GPAT2Q6NUI2 795 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 CASC4Q6P4E1 433 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 INTS5Q6P9B9 1019 aaKnown RBP9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 ZNF767PQ75MW2 155 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 KCTD20Q7Z5Y7 419 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 CMC1Q7Z7K0 106 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 TXNRD3Q86VQ6 643 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 LDHDQ86WU2 507 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 PTRH1Q86Y79 214 aaKnown RBP9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 SPPL2CQ8IUH8 684 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 PLD3Q8IV08 490 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 METTL4Q8N3J2 472 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 GALNT6Q8NCL4 622 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 ZNF555Q8NEP9 628 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 OR5H6Q8NGV6 325 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 JOSD2Q8TAC2 188 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 FAM110BQ8TC76 370 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 RORBQ92753 470 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 ST6GAL2Q96JF0 529 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 PSKH2Q96QS6 385 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 C2orf40Q9H1Z8 148 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 MEAF6Q9HAF1 191 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 TLR9Q9NR96 1032 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 IL37Q9NZH6 218 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms