RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 METTL18O95568 372 aa11.98□□□□□ -0.49
VPS13D-204ENST00000469054 CFIP05156 583 aa11.98□□□□□ -0.49
VPS13D-204ENST00000469054 ETS1P14921 441 aa11.98□□□□□ -0.49
VPS13D-204ENST00000469054 ZNF30P17039 623 aa11.98□□□□□ -0.49
VPS13D-204ENST00000469054 LHCGRP22888 699 aa11.98□□□□□ -0.49
VPS13D-204ENST00000469054 CD38P28907 300 aa11.98□□□□□ -0.49
VPS13D-204ENST00000469054 AFF3P51826 1226 aaKnown RBP11.98□□□□□ -0.49
VPS13D-204ENST00000469054 IRX4P78413 519 aa11.98□□□□□ -0.49
VPS13D-204ENST00000469054 ARHGEF7Q14155 803 aa11.98□□□□□ -0.49
VPS13D-204ENST00000469054 AGERQ15109 404 aa11.98□□□□□ -0.49
VPS13D-204ENST00000469054 TEAD4Q15561 434 aa11.98□□□□□ -0.49
VPS13D-204ENST00000469054 CNGA3Q16281 694 aa11.98□□□□□ -0.49
VPS13D-204ENST00000469054 CDKN3Q16667 212 aa11.98□□□□□ -0.49
VPS13D-204ENST00000469054 LRRC66Q68CR7 880 aa11.98□□□□□ -0.49
VPS13D-204ENST00000469054 CRTC1Q6UUV9 634 aa11.98□□□□□ -0.49
VPS13D-204ENST00000469054 SYT10Q6XYQ8 523 aa11.98□□□□□ -0.49
VPS13D-204ENST00000469054 TSPAN33Q86UF1 283 aa11.98□□□□□ -0.49
VPS13D-204ENST00000469054 ALYREFQ86V81 257 aaKnown RBP11.98□□□□□ -0.49
VPS13D-204ENST00000469054 CREG2Q8IUH2 290 aa11.98□□□□□ -0.49
VPS13D-204ENST00000469054 KLHDC8BQ8IXV7 354 aa11.98□□□□□ -0.49
VPS13D-204ENST00000469054 CBARPQ8N350 705 aaPredicted RBP11.98□□□□□ -0.49
VPS13D-204ENST00000469054 C12orf50Q8NA57 414 aaPredicted RBP11.98□□□□□ -0.49
VPS13D-204ENST00000469054 DENND6BQ8NEG7 585 aa11.98□□□□□ -0.49
VPS13D-204ENST00000469054 CENPTQ96BT3 561 aa11.98□□□□□ -0.49
VPS13D-204ENST00000469054 KLF6Q99612 283 aaPredicted RBP11.98□□□□□ -0.49
VPS13D-204ENST00000469054 MYOCQ99972 504 aa11.98□□□□□ -0.49
VPS13D-204ENST00000469054 C1QTNF7Q9BXJ2 289 aa11.98□□□□□ -0.49
VPS13D-204ENST00000469054 FSD1LQ9BXM9 530 aa11.98□□□□□ -0.49
VPS13D-204ENST00000469054 NUSAP1Q9BXS6 441 aaKnown RBP11.98□□□□□ -0.49
VPS13D-204ENST00000469054 FZD3Q9NPG1 666 aa11.98□□□□□ -0.49
VPS13D-204ENST00000469054 PAK5Q9P286 719 aa11.98□□□□□ -0.49
VPS13D-204ENST00000469054 COQ6Q9Y2Z9 468 aa11.98□□□□□ -0.49
VPS13D-204ENST00000469054 GON4LQ3T8J9 2241 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 GOLGA6L10A0A0M3HER8 536 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 A0A1W2PR77 199 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 GOLGA6CA6NDK9 693 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 GOLGA6BA6NDN3 693 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 PSMD11O00231 422 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 VILLO15195 856 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 FOXD2O60548 495 aaPredicted RBP11.97□□□□□ -0.49
VPS13D-204ENST00000469054 RECQL5O94762 991 aaPredicted RBP11.97□□□□□ -0.49
VPS13D-204ENST00000469054 WNT1P04628 370 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 SYPP08247 313 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 ATXN1LP0C7T5 689 aaKnown RBP11.97□□□□□ -0.49
VPS13D-204ENST00000469054 GOLGA6DP0CG33 693 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 HLA-DPA1P20036 260 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 ADRA1AP35348 466 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 FDFT1P37268 417 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 COILP38432 576 aaPredicted RBP11.97□□□□□ -0.49
VPS13D-204ENST00000469054 CSNK1EP49674 416 aaKnown RBP11.97□□□□□ -0.49
VPS13D-204ENST00000469054 LMNB2Q03252 620 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 PTSQ03393 145 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 ACOX1Q15067 660 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 SF3A2Q15428 464 aaKnown RBP11.97□□□□□ -0.49
VPS13D-204ENST00000469054 SLC1A5Q15758 541 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 KCTD11Q693B1 232 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 TCEAL6Q6IPX3 200 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 RANBP10Q6VN20 620 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 PRR23CQ6ZRP0 262 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 GSTA5Q7RTV2 222 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 PRUNE1Q86TP1 453 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 SLC25A41Q8N5S1 370 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 MFSD2AQ8NA29 543 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 GLIS1Q8NBF1 620 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 FAM174AQ8TBP5 190 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 TCEAL3Q969E4 200 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 SKA1Q96BD8 255 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 CAPZA3Q96KX2 299 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 BMFQ96LC9 184 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 C16orf45Q96MC5 204 aaPredicted RBP11.97□□□□□ -0.49
VPS13D-204ENST00000469054 COQ10AQ96MF6 247 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 SRPK1Q96SB4 655 aaKnown RBP11.97□□□□□ -0.49
VPS13D-204ENST00000469054 FICDQ9BVA6 458 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 ETNK1Q9HBU6 452 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 MAGEE1Q9HCI5 957 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 KCTD5Q9NXV2 234 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 GOLGA6AQ9NYA3 693 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 RNF14Q9UBS8 474 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 CA5BQ9Y2D0 317 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 THADAQ6YHU6 1953 aa11.97□□□□□ -0.49
VPS13D-204ENST00000469054 OTOGLQ3ZCN5 2332 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 A0A0U1RQS6 177 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 C1orf232A0A0U1RR37 186 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 A0A1B0GVT2 93 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 GOLGA8CPA6NN73 597 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 ARHGAP33O14559 1287 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 FPGTO14772 594 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 PSMD3O43242 534 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 PHF2O75151 1096 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 CLDN7O95471 211 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 AGTP01019 485 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 FGF1P05230 155 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 ZSCAN5DPP0CG00 497 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 GM2AP17900 193 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 RPL22P35268 128 aaKnown RBP11.96□□□□□ -0.49
VPS13D-204ENST00000469054 PAFAH1B1P43034 410 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 CHRNA4P43681 627 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 STC1P52823 247 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 C21orf59P57076 290 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 CLDN2P57739 230 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms