RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 CCKBRP32239 447 aa17.33■□□□□ 0.36
TRIM56-203ENST00000467847 NSUN2Q08J23 767 aaKnown RBP eCLIP17.33■□□□□ 0.36
TRIM56-203ENST00000467847 RFTN1Q14699 578 aaPredicted RBP17.33■□□□□ 0.36
TRIM56-203ENST00000467847 STX1AQ16623 288 aa17.33■□□□□ 0.36
TRIM56-203ENST00000467847 PPP6R3Q5H9R7 873 aaPredicted RBP17.33■□□□□ 0.36
TRIM56-203ENST00000467847 CERCAMQ5T4B2 595 aa17.33■□□□□ 0.36
TRIM56-203ENST00000467847 LIPIQ6XZB0 460 aa17.33■□□□□ 0.36
TRIM56-203ENST00000467847 ARHGAP36Q6ZRI8 547 aa17.33■□□□□ 0.36
TRIM56-203ENST00000467847 DPPA4Q7L190 304 aa17.33■□□□□ 0.36
TRIM56-203ENST00000467847 IRF2BP2Q7Z5L9 587 aa17.33■□□□□ 0.36
TRIM56-203ENST00000467847 ARHGAP12Q8IWW6 846 aa17.33■□□□□ 0.36
TRIM56-203ENST00000467847 ARFGAP1Q8N6T3 406 aa17.33■□□□□ 0.36
TRIM56-203ENST00000467847 NPWQ8N729 165 aa17.33■□□□□ 0.36
TRIM56-203ENST00000467847 PEBP4Q96S96 227 aa17.33■□□□□ 0.36
TRIM56-203ENST00000467847 PISDQ9UG56 409 aa17.33■□□□□ 0.36
TRIM56-203ENST00000467847 APPL1Q9UKG1 709 aa17.33■□□□□ 0.36
TRIM56-203ENST00000467847 A8MX80 341 aa17.32■□□□□ 0.36
TRIM56-203ENST00000467847 B4DGG1 531 aa17.32■□□□□ 0.36
TRIM56-203ENST00000467847 PRPSAP2O60256 369 aa17.32■□□□□ 0.36
TRIM56-203ENST00000467847 RNF8O76064 485 aa17.32■□□□□ 0.36
TRIM56-203ENST00000467847 WISP1O95388 367 aa17.32■□□□□ 0.36
TRIM56-203ENST00000467847 SCNN1BP51168 640 aa17.32■□□□□ 0.36
TRIM56-203ENST00000467847 IL10RBQ08334 325 aa17.32■□□□□ 0.36
TRIM56-203ENST00000467847 ACOX1Q15067 660 aa17.32■□□□□ 0.36
TRIM56-203ENST00000467847 PLEKHA7Q6IQ23 1121 aa17.32■□□□□ 0.36
TRIM56-203ENST00000467847 OGFOD3Q6PK18 319 aa17.32■□□□□ 0.36
TRIM56-203ENST00000467847 APTXQ7Z2E3 356 aaKnown RBP17.32■□□□□ 0.36
TRIM56-203ENST00000467847 MED8Q96G25 268 aa17.32■□□□□ 0.36
TRIM56-203ENST00000467847 SYT11Q9BT88 431 aa17.32■□□□□ 0.36
TRIM56-203ENST00000467847 TMEM168Q9H0V1 697 aa17.32■□□□□ 0.36
TRIM56-203ENST00000467847 DPEP2Q9H4A9 486 aa17.32■□□□□ 0.36
TRIM56-203ENST00000467847 WDR26Q9H7D7 661 aa17.32■□□□□ 0.36
TRIM56-203ENST00000467847 CYP4F12Q9HCS2 524 aa17.32■□□□□ 0.36
TRIM56-203ENST00000467847 MOSPD1Q9UJG1 213 aa17.32■□□□□ 0.36
TRIM56-203ENST00000467847 LOXL2Q9Y4K0 774 aa17.32■□□□□ 0.36
TRIM56-203ENST00000467847 AGRPO00253 132 aa17.31■□□□□ 0.36
TRIM56-203ENST00000467847 TRAFD1O14545 582 aaPredicted RBP17.31■□□□□ 0.36
TRIM56-203ENST00000467847 TNFRSF10CO14798 259 aa17.31■□□□□ 0.36
TRIM56-203ENST00000467847 NOBOXO60393 691 aa17.31■□□□□ 0.36
TRIM56-203ENST00000467847 HOXC4P09017 264 aaPredicted RBP17.31■□□□□ 0.36
TRIM56-203ENST00000467847 PNLIPP16233 465 aa17.31■□□□□ 0.36
TRIM56-203ENST00000467847 MIPP30301 263 aa17.31■□□□□ 0.36
TRIM56-203ENST00000467847 TRIM23P36406 574 aa17.31■□□□□ 0.36
TRIM56-203ENST00000467847 RENBPP51606 427 aa17.31■□□□□ 0.36
TRIM56-203ENST00000467847 AP1S1P61966 158 aa17.31■□□□□ 0.36
TRIM56-203ENST00000467847 ARHGEF7Q14155 803 aa17.31■□□□□ 0.36
TRIM56-203ENST00000467847 C14orf28Q4W4Y0 310 aa17.31■□□□□ 0.36
TRIM56-203ENST00000467847 SPECC1LQ69YQ0 1117 aa17.31■□□□□ 0.36
TRIM56-203ENST00000467847 SPRED1Q7Z699 444 aa17.31■□□□□ 0.36
TRIM56-203ENST00000467847 SFTPA2Q8IWL1 248 aa17.31■□□□□ 0.36
TRIM56-203ENST00000467847 LGR4Q9BXB1 951 aa17.31■□□□□ 0.36
TRIM56-203ENST00000467847 HSD3B7Q9H2F3 369 aa17.31■□□□□ 0.36
TRIM56-203ENST00000467847 LRIT1Q9P2V4 623 aa17.31■□□□□ 0.36
TRIM56-203ENST00000467847 SEPT3Q9UH03 358 aa17.31■□□□□ 0.36
TRIM56-203ENST00000467847 RNF215Q9Y6U7 377 aa17.31■□□□□ 0.36
TRIM56-203ENST00000467847 TMEM191CA6NGB0 347 aa17.3■□□□□ 0.36
TRIM56-203ENST00000467847 PDE2AO00408 941 aaPredicted RBP17.3■□□□□ 0.36
TRIM56-203ENST00000467847 TEX33O43247 280 aa17.3■□□□□ 0.36
TRIM56-203ENST00000467847 ATP1A3P13637 1013 aa17.3■□□□□ 0.36
TRIM56-203ENST00000467847 GM2AP17900 193 aa17.3■□□□□ 0.36
TRIM56-203ENST00000467847 HLTFQ14527 1009 aaKnown RBP eCLIP17.3■□□□□ 0.36
TRIM56-203ENST00000467847 LBRQ14739 615 aaKnown RBP17.3■□□□□ 0.36
TRIM56-203ENST00000467847 NCAPHQ15003 741 aa17.3■□□□□ 0.36
TRIM56-203ENST00000467847 TGIF1Q15583 401 aa17.3■□□□□ 0.36
TRIM56-203ENST00000467847 TSR1Q2NL82 804 aaKnown RBP17.3■□□□□ 0.36
TRIM56-203ENST00000467847 TMCO4Q5TGY1 634 aa17.3■□□□□ 0.36
TRIM56-203ENST00000467847 PNCKQ6P2M8 343 aa17.3■□□□□ 0.36
TRIM56-203ENST00000467847 CYP4V2Q6ZWL3 525 aaPredicted RBP17.3■□□□□ 0.36
TRIM56-203ENST00000467847 PSTKQ8IV42 348 aaKnown RBP17.3■□□□□ 0.36
TRIM56-203ENST00000467847 PELI3Q8N2H9 469 aa17.3■□□□□ 0.36
TRIM56-203ENST00000467847 CCL4L1Q8NHW4 92 aa17.3■□□□□ 0.36
TRIM56-203ENST00000467847 TMEM159Q96B96 161 aa17.3■□□□□ 0.36
TRIM56-203ENST00000467847 PSKH2Q96QS6 385 aa17.3■□□□□ 0.36
TRIM56-203ENST00000467847 TRIM7Q9C029 511 aa17.3■□□□□ 0.36
TRIM56-203ENST00000467847 CWC15Q9P013 229 aaKnown RBP17.3■□□□□ 0.36
TRIM56-203ENST00000467847 B4GALT6Q9UBX8 382 aa17.3■□□□□ 0.36
TRIM56-203ENST00000467847 ACSL6Q9UKU0 697 aa17.3■□□□□ 0.36
TRIM56-203ENST00000467847 MYO6Q9UM54 1294 aa17.3■□□□□ 0.36
TRIM56-203ENST00000467847 BOD1L1Q8NFC6 3051 aa17.29■□□□□ 0.36
TRIM56-203ENST00000467847 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.29■□□□□ 0.36
TRIM56-203ENST00000467847 PRSS38A1L453 326 aa17.29■□□□□ 0.36
TRIM56-203ENST00000467847 TTC24A2A3L6 582 aaPredicted RBP17.29■□□□□ 0.36
TRIM56-203ENST00000467847 NVLO15381 856 aaKnown RBP17.29■□□□□ 0.36
TRIM56-203ENST00000467847 EFSO43281 561 aa17.29■□□□□ 0.36
TRIM56-203ENST00000467847 NUDT21O43809 227 aaKnown RBP17.29■□□□□ 0.36
TRIM56-203ENST00000467847 MYCLP1P12525 358 aaPredicted RBP17.29■□□□□ 0.36
TRIM56-203ENST00000467847 ITIH1P19827 911 aa17.29■□□□□ 0.36
TRIM56-203ENST00000467847 HCAR3P49019 387 aa17.29■□□□□ 0.36
TRIM56-203ENST00000467847 ZNF135P52742 658 aaPredicted RBP17.29■□□□□ 0.36
TRIM56-203ENST00000467847 ZFP36L1Q07352 338 aaKnown RBP17.29■□□□□ 0.36
TRIM56-203ENST00000467847 SLC10A7Q0GE19 358 aa17.29■□□□□ 0.36
TRIM56-203ENST00000467847 DPYSQ14117 519 aa17.29■□□□□ 0.36
TRIM56-203ENST00000467847 ZNF235Q14590 738 aa17.29■□□□□ 0.36
TRIM56-203ENST00000467847 PRICKLE2Q7Z3G6 844 aa17.29■□□□□ 0.36
TRIM56-203ENST00000467847 TP53INP2Q8IXH6 220 aa17.29■□□□□ 0.36
TRIM56-203ENST00000467847 AOPEPQ8N6M6 819 aa17.29■□□□□ 0.36
TRIM56-203ENST00000467847 KIAA1524Q8TCG1 905 aa17.29■□□□□ 0.36
TRIM56-203ENST00000467847 FNIP1Q8TF40 1166 aa17.29■□□□□ 0.36
TRIM56-203ENST00000467847 PDCD6IPQ8WUM4 868 aaKnown RBP17.29■□□□□ 0.36
TRIM56-203ENST00000467847 NUS1Q96E22 293 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms