RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 NSUN7Q8NE18 718 aaKnown RBP5.64□□□□□ -1.51
PTCD3-207ENST00000467273 KBTBD7Q8WVZ9 684 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 SEC14L1Q92503 715 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 PIWIL1Q96J94 861 aaKnown RBP5.64□□□□□ -1.51
PTCD3-207ENST00000467273 SSBP3Q9BWW4 388 aaPredicted RBP5.64□□□□□ -1.51
PTCD3-207ENST00000467273 TRIM9Q9C026 710 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 LRRC27Q9C0I9 530 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 FBXO44Q9H4M3 255 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 AASDHPPTQ9NRN7 309 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 PDRG1Q9NUG6 133 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 C14orf119Q9NWQ9 140 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 MYOTQ9UBF9 498 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 ZNF69Q9UC07 566 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 NCKAP1Q9Y2A7 1128 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 MAN2B2Q9Y2E5 1009 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 ABCA12Q86UK0 2595 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 PLXNA2O75051 1894 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 SPTBN1Q01082 2364 aaKnown RBP5.63□□□□□ -1.51
PTCD3-207ENST00000467273 A0A1W2PR77 199 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 LRRC72A6NJI9 287 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 ANKRD63C9JTQ0 380 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 TLR4O00206 839 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 MAFKO60675 156 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 TMEM191BP0C7N4 346 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 PLA2G4BP0C869 781 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 MYBL2P10244 700 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 CKMT1AP12532 417 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 PTPN1P18031 435 aaKnown RBP5.63□□□□□ -1.51
PTCD3-207ENST00000467273 PRKCHP24723 683 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 LMO2P25791 158 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 LSP1P33241 339 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 DUSP3P51452 185 aaPredicted RBP5.63□□□□□ -1.51
PTCD3-207ENST00000467273 PSMC1P62191 440 aaKnown RBP5.63□□□□□ -1.51
PTCD3-207ENST00000467273 PHC1P78364 1004 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 FAPQ12884 760 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 KLF10Q13118 480 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 KLF1Q13351 362 aaPredicted RBP5.63□□□□□ -1.51
PTCD3-207ENST00000467273 GEN1Q17RS7 908 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 LINC00303Q3SY05 128 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 ESRP1Q6NXG1 681 aaKnown RBP5.63□□□□□ -1.51
PTCD3-207ENST00000467273 LAYNQ6UX15 382 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 MILR1Q7Z6M3 343 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.63□□□□□ -1.51
PTCD3-207ENST00000467273 KRT77Q7Z794 578 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 TADA2BQ86TJ2 420 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 PALM2Q8IXS6 379 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 ARL14Q8N4G2 192 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 MYCT1Q8N699 235 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 OR2T34Q8NGX1 318 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 OR4C6Q8NH72 309 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 POMGNT1Q8WZA1 660 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 SGF29Q96ES7 293 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 TSPAN17Q96FV3 270 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 HPDLQ96IR7 371 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 CDK5RAP1Q96SZ6 601 aaKnown RBP5.63□□□□□ -1.51
PTCD3-207ENST00000467273 MYCBPQ99417 103 aaPredicted RBP5.63□□□□□ -1.51
PTCD3-207ENST00000467273 DCLK3Q9C098 648 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 ADNPQ9H2P0 1102 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 TMEM245Q9H330 911 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 RETREG1Q9H6L5 497 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 ZMAT4Q9H898 229 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 DMAP1Q9NPF5 467 aaPredicted RBP5.63□□□□□ -1.51
PTCD3-207ENST00000467273 ACSS2Q9NR19 701 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 TLR8Q9NR97 1041 aaKnown RBP5.63□□□□□ -1.51
PTCD3-207ENST00000467273 RIC8BQ9NVN3 520 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 NCKIPSDQ9NZQ3 722 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 ZIM2Q9NZV7 527 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 ASH2LQ9UBL3 628 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 ING1Q9UK53 422 aaPredicted RBP5.63□□□□□ -1.51
PTCD3-207ENST00000467273 INTUQ9ULD6 942 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 FZD4Q9ULV1 537 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 PLA2G4CQ9UP65 541 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 PAXBP1Q9Y5B6 917 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 PCDHB4Q9Y5E5 795 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 PCDHB1Q9Y5F3 818 aa5.63□□□□□ -1.51
PTCD3-207ENST00000467273 TCRBV5S2A0A599 114 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 DYTNA2CJ06 578 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 KIAA0391O15091 583 aaKnown RBP5.62□□□□□ -1.51
PTCD3-207ENST00000467273 RNASEH1O60930 286 aaKnown RBP5.62□□□□□ -1.51
PTCD3-207ENST00000467273 CSO75390 466 aaKnown RBP5.62□□□□□ -1.51
PTCD3-207ENST00000467273 RNASEH2AO75792 299 aaKnown RBP5.62□□□□□ -1.51
PTCD3-207ENST00000467273 SCGB1D2O95969 90 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 C4BPAP04003 597 aaKnown RBP5.62□□□□□ -1.51
PTCD3-207ENST00000467273 WNT1P04628 370 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 ITGA2BP08514 1039 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 KRT19P08727 400 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 ALPPL2P10696 532 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 IRF1P10914 325 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 MYF5P13349 255 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 GNL1P36915 607 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-207ENST00000467273 CASP2P42575 452 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 SLC5A3P53794 718 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 GALCP54803 685 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 SCAND1P57086 179 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 RPS14P62263 151 aaKnown RBP5.62□□□□□ -1.51
PTCD3-207ENST00000467273 HLTFQ14527 1009 aaKnown RBP eCLIP5.62□□□□□ -1.51
PTCD3-207ENST00000467273 SURF1Q15526 300 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 LONRF1Q17RB8 773 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 ISXQ2M1V0 245 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 MDH1BQ5I0G3 518 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms