RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 CYP4F12Q9HCS2 524 aa17.59■□□□□ 0.41
COL7A1-206ENST00000466591 LUC7L2Q9Y383 392 aaKnown RBP17.59■□□□□ 0.41
COL7A1-206ENST00000466591 A0A1W2PQJ5 194 aa17.58■□□□□ 0.4
COL7A1-206ENST00000466591 B4DGG1 531 aa17.58■□□□□ 0.4
COL7A1-206ENST00000466591 SOCS5O75159 536 aa17.58■□□□□ 0.4
COL7A1-206ENST00000466591 RARAP10276 462 aa17.58■□□□□ 0.4
COL7A1-206ENST00000466591 MMP13P45452 471 aa17.58■□□□□ 0.4
COL7A1-206ENST00000466591 PPM1FP49593 454 aaPredicted RBP17.58■□□□□ 0.4
COL7A1-206ENST00000466591 CDH6P55285 790 aa17.58■□□□□ 0.4
COL7A1-206ENST00000466591 ZBED6P86452 979 aa17.58■□□□□ 0.4
COL7A1-206ENST00000466591 LIPIQ6XZB0 460 aa17.58■□□□□ 0.4
COL7A1-206ENST00000466591 USP45Q70EL2 814 aa17.58■□□□□ 0.4
COL7A1-206ENST00000466591 PLA2G15Q8NCC3 412 aa17.58■□□□□ 0.4
COL7A1-206ENST00000466591 WDR36Q8NI36 951 aaKnown RBP17.58■□□□□ 0.4
COL7A1-206ENST00000466591 ECHDC3Q96DC8 303 aa17.58■□□□□ 0.4
COL7A1-206ENST00000466591 CSPG4P5Q96PW8 444 aa17.58■□□□□ 0.4
COL7A1-206ENST00000466591 THAP2Q9H0W7 228 aa17.58■□□□□ 0.4
COL7A1-206ENST00000466591 PHPT1Q9NRX4 125 aaPredicted RBP17.58■□□□□ 0.4
COL7A1-206ENST00000466591 KCTD5Q9NXV2 234 aa17.58■□□□□ 0.4
COL7A1-206ENST00000466591 B4GALT6Q9UBX8 382 aa17.58■□□□□ 0.4
COL7A1-206ENST00000466591 PCDHGC4Q9Y5F7 938 aa17.58■□□□□ 0.4
COL7A1-206ENST00000466591 RAI2Q9Y5P3 530 aa17.58■□□□□ 0.4
COL7A1-206ENST00000466591 DSPP15924 2871 aaKnown RBP17.58■□□□□ 0.4
COL7A1-206ENST00000466591 ZFYVE26Q68DK2 2539 aa17.58■□□□□ 0.4
COL7A1-206ENST00000466591 CCDC187A0A096LP49 1063 aa17.57■□□□□ 0.4
COL7A1-206ENST00000466591 TTC24A2A3L6 582 aaPredicted RBP17.57■□□□□ 0.4
COL7A1-206ENST00000466591 TMX2-CTNND1H3BSU7 103 aa17.57■□□□□ 0.4
COL7A1-206ENST00000466591 RPLP0P05388 317 aaKnown RBP17.57■□□□□ 0.4
COL7A1-206ENST00000466591 IL1R2P27930 398 aa17.57■□□□□ 0.4
COL7A1-206ENST00000466591 VIPR1P32241 457 aa17.57■□□□□ 0.4
COL7A1-206ENST00000466591 EPHB1P54762 984 aa17.57■□□□□ 0.4
COL7A1-206ENST00000466591 KIAA1024LP59773 190 aa17.57■□□□□ 0.4
COL7A1-206ENST00000466591 TLE3Q04726 772 aa17.57■□□□□ 0.4
COL7A1-206ENST00000466591 RALGDSQ12967 914 aa17.57■□□□□ 0.4
COL7A1-206ENST00000466591 IQCB1Q15051 598 aa17.57■□□□□ 0.4
COL7A1-206ENST00000466591 AGERQ15109 404 aa17.57■□□□□ 0.4
COL7A1-206ENST00000466591 TAF1BQ53T94 588 aaPredicted RBP17.57■□□□□ 0.4
COL7A1-206ENST00000466591 ARMC12Q5T9G4 340 aa17.57■□□□□ 0.4
COL7A1-206ENST00000466591 POLNQ7Z5Q5 900 aa17.57■□□□□ 0.4
COL7A1-206ENST00000466591 JAMLQ86YT9 394 aa17.57■□□□□ 0.4
COL7A1-206ENST00000466591 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.57■□□□□ 0.4
COL7A1-206ENST00000466591 Q8N9G6 341 aaPredicted RBP17.57■□□□□ 0.4
COL7A1-206ENST00000466591 TEKT4Q8WW24 435 aa17.57■□□□□ 0.4
COL7A1-206ENST00000466591 SYN2Q92777 582 aaPredicted RBP17.57■□□□□ 0.4
COL7A1-206ENST00000466591 FUBP1Q96AE4 644 aaKnown RBP17.57■□□□□ 0.4
COL7A1-206ENST00000466591 BTBD6Q96KE9 485 aa17.57■□□□□ 0.4
COL7A1-206ENST00000466591 NUDCD1Q96RS6 583 aa17.57■□□□□ 0.4
COL7A1-206ENST00000466591 ANP32EQ9BTT0 268 aa17.57■□□□□ 0.4
COL7A1-206ENST00000466591 ZMYND15Q9H091 742 aa17.57■□□□□ 0.4
COL7A1-206ENST00000466591 DEF6Q9H4E7 631 aa17.57■□□□□ 0.4
COL7A1-206ENST00000466591 PRORYQ9H606 182 aa17.57■□□□□ 0.4
COL7A1-206ENST00000466591 MRPL40Q9NQ50 206 aaKnown RBP17.57■□□□□ 0.4
COL7A1-206ENST00000466591 PNMA8BQ9ULN7 279 aaPredicted RBP17.57■□□□□ 0.4
COL7A1-206ENST00000466591 PHTF1Q9UMS5 762 aa17.57■□□□□ 0.4
COL7A1-206ENST00000466591 ENTPD2Q9Y5L3 495 aa17.57■□□□□ 0.4
COL7A1-206ENST00000466591 TEX51A0A1B0GUA7 166 aa17.56■□□□□ 0.4
COL7A1-206ENST00000466591 ZW10O43264 779 aa17.56■□□□□ 0.4
COL7A1-206ENST00000466591 DXOO77932 396 aaKnown RBP17.56■□□□□ 0.4
COL7A1-206ENST00000466591 TNFSF15O95150 251 aa17.56■□□□□ 0.4
COL7A1-206ENST00000466591 MAXP61244 160 aa17.56■□□□□ 0.4
COL7A1-206ENST00000466591 RAET1GQ6H3X3 334 aa17.56■□□□□ 0.4
COL7A1-206ENST00000466591 PNCKQ6P2M8 343 aa17.56■□□□□ 0.4
COL7A1-206ENST00000466591 CYP4V2Q6ZWL3 525 aaPredicted RBP17.56■□□□□ 0.4
COL7A1-206ENST00000466591 TP53INP2Q8IXH6 220 aa17.56■□□□□ 0.4
COL7A1-206ENST00000466591 KCTD6Q8NC69 237 aa17.56■□□□□ 0.4
COL7A1-206ENST00000466591 KIAA1524Q8TCG1 905 aa17.56■□□□□ 0.4
COL7A1-206ENST00000466591 RBM15Q96T37 977 aaKnown RBP eCLIP17.56■□□□□ 0.4
COL7A1-206ENST00000466591 CARS2Q9HA77 564 aaKnown RBP17.56■□□□□ 0.4
COL7A1-206ENST00000466591 NOD2Q9HC29 1040 aa17.56■□□□□ 0.4
COL7A1-206ENST00000466591 PCDH18Q9HCL0 1135 aa17.56■□□□□ 0.4
COL7A1-206ENST00000466591 NT5MQ9NPB1 228 aa17.56■□□□□ 0.4
COL7A1-206ENST00000466591 CTTNBP2NLQ9P2B4 639 aa17.56■□□□□ 0.4
COL7A1-206ENST00000466591 DGKBQ9Y6T7 804 aa17.56■□□□□ 0.4
COL7A1-206ENST00000466591 TMEM202A6NGA9 273 aa17.55■□□□□ 0.4
COL7A1-206ENST00000466591 JMJD7P0C870 316 aa17.55■□□□□ 0.4
COL7A1-206ENST00000466591 MYCLP1P12525 358 aaPredicted RBP17.55■□□□□ 0.4
COL7A1-206ENST00000466591 TCF4P15884 667 aa17.55■□□□□ 0.4
COL7A1-206ENST00000466591 PTMSP20962 102 aa17.55■□□□□ 0.4
COL7A1-206ENST00000466591 CA4P22748 312 aa17.55■□□□□ 0.4
COL7A1-206ENST00000466591 INHBCP55103 352 aa17.55■□□□□ 0.4
COL7A1-206ENST00000466591 ILF3Q12906 894 aaKnown RBP eCLIP17.55■□□□□ 0.4
COL7A1-206ENST00000466591 ODF2Q5BJF6 829 aa17.55■□□□□ 0.4
COL7A1-206ENST00000466591 RALGPS1Q5JS13 557 aa17.55■□□□□ 0.4
COL7A1-206ENST00000466591 TIGD7Q6NT04 549 aaPredicted RBP17.55■□□□□ 0.4
COL7A1-206ENST00000466591 ALKBH5Q6P6C2 394 aaKnown RBP17.55■□□□□ 0.4
COL7A1-206ENST00000466591 CCNJLQ8IV13 435 aa17.55■□□□□ 0.4
COL7A1-206ENST00000466591 MAP7D3Q8IWC1 876 aa17.55■□□□□ 0.4
COL7A1-206ENST00000466591 ZNF564Q8TBZ8 553 aaPredicted RBP17.55■□□□□ 0.4
COL7A1-206ENST00000466591 CTNNBL1Q8WYA6 563 aaPredicted RBP17.55■□□□□ 0.4
COL7A1-206ENST00000466591 OR1E3Q8WZA6 343 aa17.55■□□□□ 0.4
COL7A1-206ENST00000466591 SLC39A7Q92504 469 aa17.55■□□□□ 0.4
COL7A1-206ENST00000466591 TMEM74Q96NL1 305 aa17.55■□□□□ 0.4
COL7A1-206ENST00000466591 DPH1Q9BZG8 443 aa17.55■□□□□ 0.4
COL7A1-206ENST00000466591 POLR1EQ9GZS1 481 aaKnown RBP17.55■□□□□ 0.4
COL7A1-206ENST00000466591 FGF22Q9HCT0 170 aa17.55■□□□□ 0.4
COL7A1-206ENST00000466591 ETNK2Q9NVF9 386 aa17.55■□□□□ 0.4
COL7A1-206ENST00000466591 IFNKQ9P0W0 207 aa17.55■□□□□ 0.4
COL7A1-206ENST00000466591 PCDHGA8Q9Y5G5 932 aa17.55■□□□□ 0.4
COL7A1-206ENST00000466591 PRSS38A1L453 326 aa17.54■□□□□ 0.4
COL7A1-206ENST00000466591 TRAFD1O14545 582 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms