RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 TTC24A2A3L6 582 aaPredicted RBP19.22■□□□□ 0.67
COL9A3-206ENST00000466532 CDRT15L2A8MXV6 281 aa19.22■□□□□ 0.67
COL9A3-206ENST00000466532 TNFSF15O95150 251 aa19.22■□□□□ 0.67
COL9A3-206ENST00000466532 RPLP0P05388 317 aaKnown RBP19.22■□□□□ 0.67
COL9A3-206ENST00000466532 GM2AP17900 193 aa19.22■□□□□ 0.67
COL9A3-206ENST00000466532 IL1R2P27930 398 aa19.22■□□□□ 0.67
COL9A3-206ENST00000466532 PCK1P35558 622 aa19.22■□□□□ 0.67
COL9A3-206ENST00000466532 ARL4AP40617 200 aa19.22■□□□□ 0.67
COL9A3-206ENST00000466532 CCL7P80098 99 aa19.22■□□□□ 0.67
COL9A3-206ENST00000466532 ZNF235Q14590 738 aa19.22■□□□□ 0.67
COL9A3-206ENST00000466532 ACOX1Q15067 660 aa19.22■□□□□ 0.67
COL9A3-206ENST00000466532 DPYSL2Q16555 572 aa19.22■□□□□ 0.67
COL9A3-206ENST00000466532 TAF8Q7Z7C8 310 aa19.22■□□□□ 0.67
COL9A3-206ENST00000466532 OR6C4Q8NGE1 309 aa19.22■□□□□ 0.67
COL9A3-206ENST00000466532 HSPH1Q92598 858 aa19.22■□□□□ 0.67
COL9A3-206ENST00000466532 CCDC97Q96F63 343 aaPredicted RBP19.22■□□□□ 0.67
COL9A3-206ENST00000466532 FGF22Q9HCT0 170 aa19.22■□□□□ 0.67
COL9A3-206ENST00000466532 B4GALT6Q9UBX8 382 aa19.22■□□□□ 0.67
COL9A3-206ENST00000466532 TCF4P15884 667 aa19.21■□□□□ 0.67
COL9A3-206ENST00000466532 AMPD1P23109 780 aa19.21■□□□□ 0.67
COL9A3-206ENST00000466532 MLLT3P42568 568 aaPredicted RBP19.21■□□□□ 0.67
COL9A3-206ENST00000466532 ZNF165P49910 485 aa19.21■□□□□ 0.67
COL9A3-206ENST00000466532 SKOR1P84550 965 aa19.21■□□□□ 0.67
COL9A3-206ENST00000466532 TMCO3Q6UWJ1 677 aa19.21■□□□□ 0.67
COL9A3-206ENST00000466532 B3GNT8Q7Z7M8 397 aa19.21■□□□□ 0.67
COL9A3-206ENST00000466532 GPR156Q8NFN8 814 aa19.21■□□□□ 0.67
COL9A3-206ENST00000466532 PDCD6IPQ8WUM4 868 aaKnown RBP19.21■□□□□ 0.67
COL9A3-206ENST00000466532 LIN37Q96GY3 246 aaPredicted RBP19.21■□□□□ 0.67
COL9A3-206ENST00000466532 LGR4Q9BXB1 951 aa19.21■□□□□ 0.67
COL9A3-206ENST00000466532 ISCUQ9H1K1 167 aa19.21■□□□□ 0.67
COL9A3-206ENST00000466532 WDR26Q9H7D7 661 aa19.21■□□□□ 0.67
COL9A3-206ENST00000466532 EPB41L5Q9HCM4 733 aa19.21■□□□□ 0.67
COL9A3-206ENST00000466532 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.21■□□□□ 0.67
COL9A3-206ENST00000466532 ETNK2Q9NVF9 386 aa19.21■□□□□ 0.67
COL9A3-206ENST00000466532 PCDHGC4Q9Y5F7 938 aa19.21■□□□□ 0.67
COL9A3-206ENST00000466532 A0A1W2PQ67 120 aa19.2■□□□□ 0.66
COL9A3-206ENST00000466532 A0A1W2PQM1 296 aa19.2■□□□□ 0.66
COL9A3-206ENST00000466532 D6RAR5 112 aa19.2■□□□□ 0.66
COL9A3-206ENST00000466532 ERVH48-1M5A8F1 160 aa19.2■□□□□ 0.66
COL9A3-206ENST00000466532 SOCS5O75159 536 aa19.2■□□□□ 0.66
COL9A3-206ENST00000466532 CPP00450 1065 aa19.2■□□□□ 0.66
COL9A3-206ENST00000466532 SERPINC1P01008 464 aa19.2■□□□□ 0.66
COL9A3-206ENST00000466532 HOXC4P09017 264 aaPredicted RBP19.2■□□□□ 0.66
COL9A3-206ENST00000466532 TRIM23P36406 574 aa19.2■□□□□ 0.66
COL9A3-206ENST00000466532 HSPA9P38646 679 aaKnown RBP19.2■□□□□ 0.66
COL9A3-206ENST00000466532 RHDQ02161 417 aa19.2■□□□□ 0.66
COL9A3-206ENST00000466532 BOLA3Q53S33 107 aa19.2■□□□□ 0.66
COL9A3-206ENST00000466532 PNCKQ6P2M8 343 aa19.2■□□□□ 0.66
COL9A3-206ENST00000466532 PCSK4Q6UW60 755 aa19.2■□□□□ 0.66
COL9A3-206ENST00000466532 POLNQ7Z5Q5 900 aa19.2■□□□□ 0.66
COL9A3-206ENST00000466532 CLEC14AQ86T13 490 aa19.2■□□□□ 0.66
COL9A3-206ENST00000466532 PELI3Q8N2H9 469 aa19.2■□□□□ 0.66
COL9A3-206ENST00000466532 PGBD5Q8N414 524 aa19.2■□□□□ 0.66
COL9A3-206ENST00000466532 FAM46DQ8NEK8 389 aa19.2■□□□□ 0.66
COL9A3-206ENST00000466532 NUS1Q96E22 293 aa19.2■□□□□ 0.66
COL9A3-206ENST00000466532 NUDCD1Q96RS6 583 aa19.2■□□□□ 0.66
COL9A3-206ENST00000466532 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.2■□□□□ 0.66
COL9A3-206ENST00000466532 FOXP3Q9BZS1 431 aa19.2■□□□□ 0.66
COL9A3-206ENST00000466532 TMEM168Q9H0V1 697 aa19.2■□□□□ 0.66
COL9A3-206ENST00000466532 LRRN3Q9H3W5 708 aa19.2■□□□□ 0.66
COL9A3-206ENST00000466532 CYP4F12Q9HCS2 524 aa19.2■□□□□ 0.66
COL9A3-206ENST00000466532 MOSPD1Q9UJG1 213 aa19.2■□□□□ 0.66
COL9A3-206ENST00000466532 TMX2-CTNND1H3BSU7 103 aa19.19■□□□□ 0.66
COL9A3-206ENST00000466532 TNFRSF10CO14798 259 aa19.19■□□□□ 0.66
COL9A3-206ENST00000466532 HTRA2O43464 458 aaPredicted RBP19.19■□□□□ 0.66
COL9A3-206ENST00000466532 PEX11BO96011 259 aa19.19■□□□□ 0.66
COL9A3-206ENST00000466532 ITGA2BP08514 1039 aa19.19■□□□□ 0.66
COL9A3-206ENST00000466532 CR2P20023 1033 aa19.19■□□□□ 0.66
COL9A3-206ENST00000466532 INHBCP55103 352 aa19.19■□□□□ 0.66
COL9A3-206ENST00000466532 VAC14Q08AM6 782 aa19.19■□□□□ 0.66
COL9A3-206ENST00000466532 EIF3IQ13347 325 aaKnown RBP19.19■□□□□ 0.66
COL9A3-206ENST00000466532 NR1I3Q14994 352 aa19.19■□□□□ 0.66
COL9A3-206ENST00000466532 CNGA3Q16281 694 aa19.19■□□□□ 0.66
COL9A3-206ENST00000466532 TAF1BQ53T94 588 aaPredicted RBP19.19■□□□□ 0.66
COL9A3-206ENST00000466532 TDRD12Q587J7 1177 aaKnown RBP19.19■□□□□ 0.66
COL9A3-206ENST00000466532 DENND2CQ68D51 928 aa19.19■□□□□ 0.66
COL9A3-206ENST00000466532 CAVIN1Q6NZI2 390 aaKnown RBP19.19■□□□□ 0.66
COL9A3-206ENST00000466532 RAB11FIP2Q7L804 512 aa19.19■□□□□ 0.66
COL9A3-206ENST00000466532 CCNJLQ8IV13 435 aa19.19■□□□□ 0.66
COL9A3-206ENST00000466532 BBS5Q8N3I7 341 aa19.19■□□□□ 0.66
COL9A3-206ENST00000466532 FBXO39Q8N4B4 442 aa19.19■□□□□ 0.66
COL9A3-206ENST00000466532 ATPAF2Q8N5M1 289 aa19.19■□□□□ 0.66
COL9A3-206ENST00000466532 Q8N9G6 341 aaPredicted RBP19.19■□□□□ 0.66
COL9A3-206ENST00000466532 SPOCK2Q92563 424 aa19.19■□□□□ 0.66
COL9A3-206ENST00000466532 COQ10AQ96MF6 247 aa19.19■□□□□ 0.66
COL9A3-206ENST00000466532 CSPG4P5Q96PW8 444 aa19.19■□□□□ 0.66
COL9A3-206ENST00000466532 STRADBQ9C0K7 418 aa19.19■□□□□ 0.66
COL9A3-206ENST00000466532 SSUH2Q9Y2M2 353 aa19.19■□□□□ 0.66
COL9A3-206ENST00000466532 PRSS38A1L453 326 aa19.18■□□□□ 0.66
COL9A3-206ENST00000466532 B4DGG1 531 aa19.18■□□□□ 0.66
COL9A3-206ENST00000466532 PDE2AO00408 941 aaPredicted RBP19.18■□□□□ 0.66
COL9A3-206ENST00000466532 PLD2O14939 933 aa19.18■□□□□ 0.66
COL9A3-206ENST00000466532 NOBOXO60393 691 aa19.18■□□□□ 0.66
COL9A3-206ENST00000466532 MAFKO60675 156 aa19.18■□□□□ 0.66
COL9A3-206ENST00000466532 RARAP10276 462 aa19.18■□□□□ 0.66
COL9A3-206ENST00000466532 GLB1P16278 677 aa19.18■□□□□ 0.66
COL9A3-206ENST00000466532 VIPR1P32241 457 aa19.18■□□□□ 0.66
COL9A3-206ENST00000466532 PIGHQ14442 188 aaPredicted RBP19.18■□□□□ 0.66
COL9A3-206ENST00000466532 IQCB1Q15051 598 aa19.18■□□□□ 0.66
COL9A3-206ENST00000466532 FIGNQ5HY92 759 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms