RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 GPR34Q9UPC5 381 aa12.52□□□□□ -0.41
SOX2-OT-203ENST00000466034 OR1A2Q9Y585 309 aa12.52□□□□□ -0.41
SOX2-OT-203ENST00000466034 CFAP46Q8IYW2 2715 aa12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 H3BRJ5 948 aa12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 TMX2-CTNND1H3BSU7 103 aa12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 ERVH48-1M5A8F1 160 aa12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 CACNB4O00305 520 aaPredicted RBP12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 SOCS5O75159 536 aa12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 PEX11BO96011 259 aa12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 CR2P20023 1033 aa12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 IL1R2P27930 398 aa12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 SCNN1BP51168 640 aa12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 CXADRP78310 365 aa12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 EIF3IQ13347 325 aaKnown RBP12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 NR1I3Q14994 352 aa12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 BOLA3Q53S33 107 aa12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 RALGPS1Q5JS13 557 aa12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 POLNQ7Z5Q5 900 aa12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 ARL14Q8N4G2 192 aa12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 OR56A4Q8NGH8 313 aa12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 OR1E3Q8WZA6 343 aa12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 CCDC74AQ96AQ1 378 aa12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 CCDC97Q96F63 343 aaPredicted RBP12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 WBP1Q96G27 269 aa12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 PDXPQ96GD0 296 aa12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 NAP1L5Q96NT1 182 aaPredicted RBP12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 GULP1Q9UBP9 304 aa12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 RABGEF1Q9UJ41 708 aa12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 ATMQ13315 3056 aa12.51□□□□□ -0.41
SOX2-OT-203ENST00000466034 TMEM202A6NGA9 273 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 D6RAR5 112 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 CASC3O15234 703 aaKnown RBP12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 C1QL1O75973 258 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 PNLIPP16233 465 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 ARL4AP40617 200 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 ZNF165P49910 485 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 RHDQ02161 417 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 SLC10A7Q0GE19 358 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 C19orf57Q0VDD7 668 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 ZNF235Q14590 738 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 IQCB1Q15051 598 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 KCTD16Q68DU8 428 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 PCSK4Q6UW60 755 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 NYAP1Q6ZVC0 841 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 RD3Q7Z3Z2 195 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 TP53INP2Q8IXH6 220 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 CBARPQ8N350 705 aaPredicted RBP12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 NIPA2Q8N8Q9 360 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 TEKT4Q8WW24 435 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 NAF1Q96HR8 494 aaKnown RBP12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 COQ10AQ96MF6 247 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 CSPG4P5Q96PW8 444 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 GFM1Q96RP9 751 aaKnown RBP12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 NUDCD1Q96RS6 583 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 MGME1Q9BQP7 344 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 FGF22Q9HCT0 170 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 ETNK2Q9NVF9 386 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 SIRPGQ9P1W8 387 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 B4GALT6Q9UBX8 382 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 METRNQ9UJH8 293 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 APPL1Q9UKG1 709 aa12.5□□□□□ -0.41
SOX2-OT-203ENST00000466034 UNC13CQ8NB66 2214 aa12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 A0A1W2PQJ5 194 aa12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 A0A1W2PQM1 296 aa12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 PSMD11O00231 422 aa12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 PDE2AO00408 941 aaPredicted RBP12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 KLK10O43240 276 aa12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 MAFKO60675 156 aa12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 ITGA2BP08514 1039 aa12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 SKILP12757 684 aa12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 GLB1P16278 677 aa12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 AMPD1P23109 780 aa12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 NFKBIAP25963 317 aa12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 TEAD1P28347 426 aa12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 CCKBRP32239 447 aa12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 SERPINB6P35237 376 aa12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 CCL7P80098 99 aa12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 PIGHQ14442 188 aaPredicted RBP12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 TSR1Q2NL82 804 aaKnown RBP12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 CERCAMQ5T4B2 595 aa12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 HGSNATQ68CP4 663 aa12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 PNCKQ6P2M8 343 aa12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 TMCO3Q6UWJ1 677 aa12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 BBS5Q8N3I7 341 aa12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 SYN2Q92777 582 aaPredicted RBP12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 TMEM74Q96NL1 305 aa12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 FUCA2Q9BTY2 467 aa12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 LRRN3Q9H3W5 708 aa12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 WDR26Q9H7D7 661 aa12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 MYO1AQ9UBC5 1043 aa12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 PCDHGA7Q9Y5G6 932 aa12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 BZW2Q9Y6E2 419 aaKnown RBP12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 ARHGEF17Q96PE2 2063 aaPredicted RBP12.49□□□□□ -0.41
SOX2-OT-203ENST00000466034 AHCTF1Q8WYP5 2266 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 PMS2P1A4D2B8 440 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 CAPN8A6NHC0 703 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 PLD2O14939 933 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 NOBOXO60393 691 aa12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 HEXIM1O94992 359 aaKnown RBP12.48□□□□□ -0.41
SOX2-OT-203ENST00000466034 TNFSF15O95150 251 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms