RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 NTRK1P04629 796 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 CYP1A1P04798 512 aaPredicted RBP11.82□□□□□ -0.52
CNOT4-208ENST00000465721 LIFP15018 202 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 EPHB2P29323 1055 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 YBEYP58557 167 aaPredicted RBP11.82□□□□□ -0.52
CNOT4-208ENST00000465721 FOXK1P85037 733 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 KCNAB2Q13303 367 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 ARHGEF7Q14155 803 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 UBAP2LQ14157 1087 aaKnown RBP11.82□□□□□ -0.52
CNOT4-208ENST00000465721 GRM3Q14832 879 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 SKIDA1Q1XH10 827 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 PARP15Q460N3 678 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 TMEM164Q5U3C3 297 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 KLHDC7AQ5VTJ3 777 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 BORAQ6PGQ7 559 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 PHLDB2Q86SQ0 1253 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 PTRH1Q86Y79 214 aaKnown RBP11.82□□□□□ -0.52
CNOT4-208ENST00000465721 NRROSQ86YC3 692 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 FAM172AQ8WUF8 416 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 SLC20A1Q8WUM9 679 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 CCDC74BQ96LY2 380 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 ZNF641Q96N77 438 aaPredicted RBP11.82□□□□□ -0.52
CNOT4-208ENST00000465721 C11orf70Q9BRQ4 267 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 LGR4Q9BXB1 951 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 NDST4Q9H3R1 872 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 DPEP2Q9H4A9 486 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 TUBD1Q9UJT1 453 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 PCDHGA3Q9Y5H0 932 aa11.82□□□□□ -0.52
CNOT4-208ENST00000465721 CREBBPQ92793 2442 aa11.81□□□□□ -0.52
CNOT4-208ENST00000465721 CRYBG3Q68DQ2 2970 aa11.81□□□□□ -0.52
CNOT4-208ENST00000465721 IGHV5-10-1A0A0J9YXX1 117 aa11.81□□□□□ -0.52
CNOT4-208ENST00000465721 PRSS38A1L453 326 aa11.81□□□□□ -0.52
CNOT4-208ENST00000465721 CFAP69A5D8W1 941 aa11.81□□□□□ -0.52
CNOT4-208ENST00000465721 WASH4PA8MWX3 477 aa11.81□□□□□ -0.52
CNOT4-208ENST00000465721 HOXC4P09017 264 aaPredicted RBP11.81□□□□□ -0.52
CNOT4-208ENST00000465721 FGF3P11487 239 aaPredicted RBP11.81□□□□□ -0.52
CNOT4-208ENST00000465721 UCHL3P15374 230 aa11.81□□□□□ -0.52
CNOT4-208ENST00000465721 KELP23276 732 aa11.81□□□□□ -0.52
CNOT4-208ENST00000465721 TRIM23P36406 574 aa11.81□□□□□ -0.52
CNOT4-208ENST00000465721 RGRP47804 291 aa11.81□□□□□ -0.52
CNOT4-208ENST00000465721 ATP1A2P50993 1020 aa11.81□□□□□ -0.52
CNOT4-208ENST00000465721 GSCP56915 257 aaPredicted RBP11.81□□□□□ -0.52
CNOT4-208ENST00000465721 OR1D5P58170 312 aa11.81□□□□□ -0.52
CNOT4-208ENST00000465721 FMO1Q01740 532 aa11.81□□□□□ -0.52
CNOT4-208ENST00000465721 PTP4A2Q12974 167 aa11.81□□□□□ -0.52
CNOT4-208ENST00000465721 AMZ1Q400G9 498 aa11.81□□□□□ -0.52
CNOT4-208ENST00000465721 PIM3Q86V86 326 aa11.81□□□□□ -0.52
CNOT4-208ENST00000465721 CAMK1DQ8IU85 385 aa11.81□□□□□ -0.52
CNOT4-208ENST00000465721 UMODL1-AS1Q8N2C9 162 aa11.81□□□□□ -0.52
CNOT4-208ENST00000465721 KIAA1524Q8TCG1 905 aa11.81□□□□□ -0.52
CNOT4-208ENST00000465721 ECHDC3Q96DC8 303 aa11.81□□□□□ -0.52
CNOT4-208ENST00000465721 TUBGCP5Q96RT8 1024 aa11.81□□□□□ -0.52
CNOT4-208ENST00000465721 CYP4F12Q9HCS2 524 aa11.81□□□□□ -0.52
CNOT4-208ENST00000465721 SPATS2LQ9NUQ6 558 aaKnown RBP11.81□□□□□ -0.52
CNOT4-208ENST00000465721 KIAA1468Q9P260 1216 aa11.81□□□□□ -0.52
CNOT4-208ENST00000465721 UBA2Q9UBT2 640 aaPredicted RBP11.81□□□□□ -0.52
CNOT4-208ENST00000465721 CACNA1DQ01668 2161 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 SHANK1Q9Y566 2161 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 ELFN1P0C7U0 828 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 GP1BBP13224 206 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 CCNB1P14635 433 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 CHRNB2P17787 502 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 CR2P20023 1033 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 CSF2RBP32927 897 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 RFC1P35251 1148 aaPredicted RBP11.8□□□□□ -0.52
CNOT4-208ENST00000465721 UGT1A3P35503 534 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 CASRP41180 1078 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 CLPPQ16740 277 aaPredicted RBP11.8□□□□□ -0.52
CNOT4-208ENST00000465721 VWA3BQ502W6 1294 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 CFAP58Q5T655 872 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 AFMIDQ63HM1 303 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 LIPIQ6XZB0 460 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 DPPA4Q7L190 304 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 ZNF677Q86XU0 584 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 SLC30A5Q8TAD4 765 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 GPBAR1Q8TDU6 330 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 PATE1Q8WXA2 126 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 TAAR9Q96RI9 348 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 TUBGCP2Q9BSJ2 902 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 CDH19Q9H159 772 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 GANQ9H2C0 597 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 LRRC19Q9H756 370 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 WDR26Q9H7D7 661 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 AKAP7Q9P0M2 348 aaPredicted RBP11.8□□□□□ -0.52
CNOT4-208ENST00000465721 SEPT3Q9UH03 358 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 ST14Q9Y5Y6 855 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 B3GALT1Q9Y5Z6 326 aa11.8□□□□□ -0.52
CNOT4-208ENST00000465721 TNRC6AQ8NDV7 1962 aaKnown RBP11.79□□□□□ -0.52
CNOT4-208ENST00000465721 TEP1Q99973 2627 aaKnown RBP11.79□□□□□ -0.52
CNOT4-208ENST00000465721 J3KR12 359 aa11.79□□□□□ -0.52
CNOT4-208ENST00000465721 CCP110O43303 1012 aa11.79□□□□□ -0.52
CNOT4-208ENST00000465721 PRAMEF11O60813 436 aa11.79□□□□□ -0.52
CNOT4-208ENST00000465721 FGF1P05230 155 aa11.79□□□□□ -0.52
CNOT4-208ENST00000465721 THRAP10827 490 aa11.79□□□□□ -0.52
CNOT4-208ENST00000465721 MYCLP1P12525 358 aaPredicted RBP11.79□□□□□ -0.52
CNOT4-208ENST00000465721 PRKCSHP14314 528 aaPredicted RBP11.79□□□□□ -0.52
CNOT4-208ENST00000465721 CD1CP29017 333 aa11.79□□□□□ -0.52
CNOT4-208ENST00000465721 SERPINA4P29622 427 aa11.79□□□□□ -0.52
CNOT4-208ENST00000465721 STAT1P42224 750 aa11.79□□□□□ -0.52
CNOT4-208ENST00000465721 LIMK2P53671 638 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms