RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 TSEN2Q8NCE0 465 aaKnown RBP17.58■□□□□ 0.4
CPSF4-209ENST00000465132 OR2A12Q8NGT7 310 aa17.58■□□□□ 0.4
CPSF4-209ENST00000465132 SPATA13Q96N96 652 aa17.58■□□□□ 0.4
CPSF4-209ENST00000465132 AP1M1Q9BXS5 423 aa17.58■□□□□ 0.4
CPSF4-209ENST00000465132 TM6SF2Q9BZW4 377 aa17.58■□□□□ 0.4
CPSF4-209ENST00000465132 TNKS2Q9H2K2 1166 aa17.58■□□□□ 0.4
CPSF4-209ENST00000465132 AASDHPPTQ9NRN7 309 aa17.58■□□□□ 0.4
CPSF4-209ENST00000465132 LHX3Q9UBR4 397 aa17.58■□□□□ 0.4
CPSF4-209ENST00000465132 ATP8A1Q9Y2Q0 1164 aa17.58■□□□□ 0.4
CPSF4-209ENST00000465132 AAR2Q9Y312 384 aaKnown RBP17.58■□□□□ 0.4
CPSF4-209ENST00000465132 APC2O95996 2303 aa17.58■□□□□ 0.4
CPSF4-209ENST00000465132 A0A1W2PR77 199 aa17.57■□□□□ 0.4
CPSF4-209ENST00000465132 NDC80O14777 642 aa17.57■□□□□ 0.4
CPSF4-209ENST00000465132 WNT9AO14904 365 aa17.57■□□□□ 0.4
CPSF4-209ENST00000465132 INSIG1O15503 277 aa17.57■□□□□ 0.4
CPSF4-209ENST00000465132 SOCS5O75159 536 aa17.57■□□□□ 0.4
CPSF4-209ENST00000465132 GCATO75600 419 aa17.57■□□□□ 0.4
CPSF4-209ENST00000465132 C5AR1P21730 350 aa17.57■□□□□ 0.4
CPSF4-209ENST00000465132 PTPN3P26045 913 aa17.57■□□□□ 0.4
CPSF4-209ENST00000465132 CD38P28907 300 aa17.57■□□□□ 0.4
CPSF4-209ENST00000465132 SUOXP51687 545 aa17.57■□□□□ 0.4
CPSF4-209ENST00000465132 ADPRHP54922 357 aa17.57■□□□□ 0.4
CPSF4-209ENST00000465132 SNX1Q13596 522 aa17.57■□□□□ 0.4
CPSF4-209ENST00000465132 SHBQ15464 509 aa17.57■□□□□ 0.4
CPSF4-209ENST00000465132 SIX1Q15475 284 aaPredicted RBP17.57■□□□□ 0.4
CPSF4-209ENST00000465132 CCDC70Q6NSX1 233 aa17.57■□□□□ 0.4
CPSF4-209ENST00000465132 DPY19L3Q6ZPD9 716 aa17.57■□□□□ 0.4
CPSF4-209ENST00000465132 SYDE1Q6ZW31 735 aaPredicted RBP17.57■□□□□ 0.4
CPSF4-209ENST00000465132 PDCD7Q8N8D1 485 aaKnown RBP17.57■□□□□ 0.4
CPSF4-209ENST00000465132 FAM71DQ8N9W8 422 aa17.57■□□□□ 0.4
CPSF4-209ENST00000465132 SAP25Q8TEE9 199 aa17.57■□□□□ 0.4
CPSF4-209ENST00000465132 ATG4AQ8WYN0 398 aa17.57■□□□□ 0.4
CPSF4-209ENST00000465132 RTP4Q96DX8 246 aa17.57■□□□□ 0.4
CPSF4-209ENST00000465132 AGAP3Q96P47 875 aa17.57■□□□□ 0.4
CPSF4-209ENST00000465132 TMEM121Q9BTD3 319 aa17.57■□□□□ 0.4
CPSF4-209ENST00000465132 SLC25A51Q9H1U9 297 aa17.57■□□□□ 0.4
CPSF4-209ENST00000465132 ZDHHC6Q9H6R6 413 aa17.57■□□□□ 0.4
CPSF4-209ENST00000465132 PAK5Q9P286 719 aa17.57■□□□□ 0.4
CPSF4-209ENST00000465132 RSPH14Q9UHP6 348 aa17.57■□□□□ 0.4
CPSF4-209ENST00000465132 TPX2Q9ULW0 747 aaKnown RBP17.57■□□□□ 0.4
CPSF4-209ENST00000465132 ITPR1Q14643 2758 aa17.56■□□□□ 0.4
CPSF4-209ENST00000465132 ECEL1O95672 775 aa17.56■□□□□ 0.4
CPSF4-209ENST00000465132 IL1BP01584 269 aa17.56■□□□□ 0.4
CPSF4-209ENST00000465132 COILP38432 576 aaPredicted RBP17.56■□□□□ 0.4
CPSF4-209ENST00000465132 WASHC5Q12768 1159 aa17.56■□□□□ 0.4
CPSF4-209ENST00000465132 SOWAHCQ53LP3 525 aaPredicted RBP17.56■□□□□ 0.4
CPSF4-209ENST00000465132 ANKRD20A2Q5SQ80 823 aa17.56■□□□□ 0.4
CPSF4-209ENST00000465132 ANKRD20A1Q5TYW2 823 aa17.56■□□□□ 0.4
CPSF4-209ENST00000465132 ANKRD20A3Q5VUR7 823 aa17.56■□□□□ 0.4
CPSF4-209ENST00000465132 GDPD4Q6W3E5 623 aa17.56■□□□□ 0.4
CPSF4-209ENST00000465132 MAATS1Q7Z4T9 603 aa17.56■□□□□ 0.4
CPSF4-209ENST00000465132 CEP112Q8N8E3 955 aa17.56■□□□□ 0.4
CPSF4-209ENST00000465132 OR14C36Q8NHC7 312 aa17.56■□□□□ 0.4
CPSF4-209ENST00000465132 SERAC1Q96JX3 654 aa17.56■□□□□ 0.4
CPSF4-209ENST00000465132 SEMA3CQ99985 751 aa17.56■□□□□ 0.4
CPSF4-209ENST00000465132 FAM118BQ9BPY3 351 aa17.56■□□□□ 0.4
CPSF4-209ENST00000465132 USP29Q9HBJ7 922 aa17.56■□□□□ 0.4
CPSF4-209ENST00000465132 GLOD4Q9HC38 313 aa17.56■□□□□ 0.4
CPSF4-209ENST00000465132 GDF3Q9NR23 364 aa17.56■□□□□ 0.4
CPSF4-209ENST00000465132 PCDHGA1Q9Y5H4 931 aa17.56■□□□□ 0.4
CPSF4-209ENST00000465132 ACACAQ13085 2346 aa17.56■□□□□ 0.4
CPSF4-209ENST00000465132 PLXNA2O75051 1894 aa17.56■□□□□ 0.4
CPSF4-209ENST00000465132 ERI2A8K979 691 aaKnown RBP17.55■□□□□ 0.4
CPSF4-209ENST00000465132 YKT6O15498 198 aa17.55■□□□□ 0.4
CPSF4-209ENST00000465132 ZNF821O75541 412 aaPredicted RBP17.55■□□□□ 0.4
CPSF4-209ENST00000465132 IFNB1P01574 187 aa17.55■□□□□ 0.4
CPSF4-209ENST00000465132 HLA-DQB2P05538 268 aa17.55■□□□□ 0.4
CPSF4-209ENST00000465132 VAV1P15498 845 aa17.55■□□□□ 0.4
CPSF4-209ENST00000465132 XPAP23025 273 aaPredicted RBP17.55■□□□□ 0.4
CPSF4-209ENST00000465132 DRD3P35462 400 aa17.55■□□□□ 0.4
CPSF4-209ENST00000465132 FDFT1P37268 417 aa17.55■□□□□ 0.4
CPSF4-209ENST00000465132 GEMP55040 296 aa17.55■□□□□ 0.4
CPSF4-209ENST00000465132 ZBTB17Q13105 803 aa17.55■□□□□ 0.4
CPSF4-209ENST00000465132 DHX34Q14147 1143 aaKnown RBP17.55■□□□□ 0.4
CPSF4-209ENST00000465132 PARP6Q2NL67 630 aa17.55■□□□□ 0.4
CPSF4-209ENST00000465132 BRAT1Q6PJG6 821 aa17.55■□□□□ 0.4
CPSF4-209ENST00000465132 TMPRSS12Q86WS5 348 aa17.55■□□□□ 0.4
CPSF4-209ENST00000465132 ZNF567Q8N184 647 aa17.55■□□□□ 0.4
CPSF4-209ENST00000465132 CNDP2Q96KP4 475 aaKnown RBP17.55■□□□□ 0.4
CPSF4-209ENST00000465132 FCRL5Q96RD9 977 aa17.55■□□□□ 0.4
CPSF4-209ENST00000465132 SRPK1Q96SB4 655 aaKnown RBP17.55■□□□□ 0.4
CPSF4-209ENST00000465132 ADGRE3Q9BY15 652 aa17.55■□□□□ 0.4
CPSF4-209ENST00000465132 PCYOX1Q9UHG3 505 aa17.55■□□□□ 0.4
CPSF4-209ENST00000465132 PPM1HQ9ULR3 514 aa17.55■□□□□ 0.4
CPSF4-209ENST00000465132 COL5A1P20908 1838 aaPredicted RBP17.54■□□□□ 0.4
CPSF4-209ENST00000465132 TBC1D3DA0A087WVF3 549 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 TBC1D3IA0A087WXS9 549 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 TBC1D3EA0A087X179 549 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 TBC1D3KA0A087X1G2 549 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 TBC1D3FA6NER0 549 aaPredicted RBP17.54■□□□□ 0.4
CPSF4-209ENST00000465132 TBC1D3LB9A6J9 549 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 TLR4O00206 839 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 KPNA3O00505 521 aaPredicted RBP17.54■□□□□ 0.4
CPSF4-209ENST00000465132 SLC7A4O43246 635 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 LATO43561 262 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 LDOC1O95751 146 aaPredicted RBP17.54■□□□□ 0.4
CPSF4-209ENST00000465132 TBC1D3HP0C7X1 549 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 CR2P20023 1033 aa17.54■□□□□ 0.4
CPSF4-209ENST00000465132 EPHA8P29322 1005 aaPredicted RBP17.54■□□□□ 0.4
CPSF4-209ENST00000465132 ARRB1P49407 418 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms