RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 TRIM69Q86WT6 500 aa11.91□□□□□ -0.5
APTX-213ENST00000465003 SYT12Q8IV01 421 aa11.91□□□□□ -0.5
APTX-213ENST00000465003 C1orf216Q8TAB5 229 aa11.91□□□□□ -0.5
APTX-213ENST00000465003 FUBP1Q96AE4 644 aaKnown RBP11.91□□□□□ -0.5
APTX-213ENST00000465003 RAB7BQ96AH8 199 aa11.91□□□□□ -0.5
APTX-213ENST00000465003 EID2BQ96D98 161 aa11.91□□□□□ -0.5
APTX-213ENST00000465003 ETNK1Q9HBU6 452 aa11.91□□□□□ -0.5
APTX-213ENST00000465003 RAB6BQ9NRW1 208 aa11.91□□□□□ -0.5
APTX-213ENST00000465003 GOLGA6AQ9NYA3 693 aa11.91□□□□□ -0.5
APTX-213ENST00000465003 PHTF1Q9UMS5 762 aa11.91□□□□□ -0.5
APTX-213ENST00000465003 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.91□□□□□ -0.5
APTX-213ENST00000465003 A0A1B0GVT2 93 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 CCDC78A2IDD5 438 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 CAPN8A6NHC0 703 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 C10orf142B7Z368 130 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 PROB1E7EW31 1015 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 K7ESM1 405 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 BCAT2O15382 392 aaPredicted RBP11.9□□□□□ -0.5
APTX-213ENST00000465003 TSPAN6O43657 245 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 AP1G1O43747 822 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 LZTS3O60299 673 aaPredicted RBP11.9□□□□□ -0.5
APTX-213ENST00000465003 GDF9O60383 454 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 GCATO75600 419 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 TM7SF2O76062 418 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 RECQL5O94762 991 aaPredicted RBP11.9□□□□□ -0.5
APTX-213ENST00000465003 PCCBP05166 539 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 RETP07949 1114 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 CD27P26842 260 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 COILP38432 576 aaPredicted RBP11.9□□□□□ -0.5
APTX-213ENST00000465003 POLR2LP62875 67 aaKnown RBP11.9□□□□□ -0.5
APTX-213ENST00000465003 BASP1P80723 227 aaKnown RBP11.9□□□□□ -0.5
APTX-213ENST00000465003 C2orf54Q08AI8 447 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 CCDC15Q0P6D6 951 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 ELP6Q0PNE2 266 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 PTPRCAPQ14761 206 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 TCEA2Q15560 299 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 SLC1A5Q15758 541 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 WDR45BQ5MNZ6 344 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 PLA2G15Q8NCC3 412 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 BLOC1S5Q8TDH9 187 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 MAIP1Q8WWC4 291 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 DNASE2BQ8WZ79 361 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 RTP4Q96DX8 246 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 SCRN2Q96FV2 425 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 KLF6Q99612 283 aaPredicted RBP11.9□□□□□ -0.5
APTX-213ENST00000465003 KDM4CQ9H3R0 1056 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 BPIFA1Q9NP55 256 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 SEMA4GQ9NTN9 838 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 CFAP69A5D8W1 941 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 SCAMP1O15126 338 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 PHF2O75151 1096 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 URI1O94763 535 aaPredicted RBP11.9□□□□□ -0.5
APTX-213ENST00000465003 HEXIM1O94992 359 aaKnown RBP11.9□□□□□ -0.5
APTX-213ENST00000465003 C1SP09871 688 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 TPH1P17752 444 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 TGM1P22735 817 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 CES1P23141 567 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 VIPR1P32241 457 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 PTSQ03393 145 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 SGCGQ13326 291 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 IRF4Q15306 451 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 P3H1Q32P28 736 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 TMEM52BQ4KMG9 183 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 SETMARQ53H47 684 aaPredicted RBP11.9□□□□□ -0.5
APTX-213ENST00000465003 TPRG1LQ5T0D9 272 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 KIAA1161Q6NSJ0 714 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 DRICH1Q6PGQ1 229 aaPredicted RBP11.9□□□□□ -0.5
APTX-213ENST00000465003 Q6ZVL8 140 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 ALYREFQ86V81 257 aaKnown RBP11.9□□□□□ -0.5
APTX-213ENST00000465003 KIAA2013Q8IYS2 634 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 C12orf50Q8NA57 414 aaPredicted RBP11.9□□□□□ -0.5
APTX-213ENST00000465003 HCAR2Q8TDS4 363 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 RUBCNQ92622 972 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 SCAMP4Q969E2 229 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 MCCC1Q96RQ3 725 aaPredicted RBP11.9□□□□□ -0.5
APTX-213ENST00000465003 ADGRE3Q9BY15 652 aa11.9□□□□□ -0.5
APTX-213ENST00000465003 FAM186AA6NE01 2351 aa11.89□□□□□ -0.51
APTX-213ENST00000465003 ZNF292O60281 2723 aa11.89□□□□□ -0.51
APTX-213ENST00000465003 PTPRZ1P23471 2315 aaPredicted RBP11.89□□□□□ -0.51
APTX-213ENST00000465003 GOLGA6L10A0A0M3HER8 536 aa11.89□□□□□ -0.51
APTX-213ENST00000465003 LOC285095A0A1B0GVY8 99 aa11.89□□□□□ -0.51
APTX-213ENST00000465003 TCRBV7S3A2A0A539 114 aa11.89□□□□□ -0.51
APTX-213ENST00000465003 LNP1A1A4G5 178 aa11.89□□□□□ -0.51
APTX-213ENST00000465003 CES2O00748 559 aa11.89□□□□□ -0.51
APTX-213ENST00000465003 GPR39O43194 453 aa11.89□□□□□ -0.51
APTX-213ENST00000465003 NDST3O95803 873 aa11.89□□□□□ -0.51
APTX-213ENST00000465003 APRTP07741 180 aa11.89□□□□□ -0.51
APTX-213ENST00000465003 HNRNPA2B1P22626 353 aaKnown RBP11.89□□□□□ -0.51
APTX-213ENST00000465003 CA4P22748 312 aa11.89□□□□□ -0.51
APTX-213ENST00000465003 STIP1P31948 543 aaKnown RBP11.89□□□□□ -0.51
APTX-213ENST00000465003 ACTN2P35609 894 aa11.89□□□□□ -0.51
APTX-213ENST00000465003 IGFALSP35858 605 aa11.89□□□□□ -0.51
APTX-213ENST00000465003 GRIA4P48058 902 aa11.89□□□□□ -0.51
APTX-213ENST00000465003 CCR5P51681 352 aa11.89□□□□□ -0.51
APTX-213ENST00000465003 GEMP55040 296 aa11.89□□□□□ -0.51
APTX-213ENST00000465003 BNC1Q01954 994 aa11.89□□□□□ -0.51
APTX-213ENST00000465003 MPP3Q13368 585 aa11.89□□□□□ -0.51
APTX-213ENST00000465003 ARHGEF7Q14155 803 aa11.89□□□□□ -0.51
APTX-213ENST00000465003 WSCD2Q2TBF2 565 aa11.89□□□□□ -0.51
APTX-213ENST00000465003 PLA2G2CQ5R387 149 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms