RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 METTL2AQ96IZ6 378 aaKnown RBP6.02□□□□□ -1.45
PTCD3-205ENST00000464541 SLC41A2Q96JW4 573 aa6.02□□□□□ -1.45
PTCD3-205ENST00000464541 OR1F2PQ96R84 312 aa6.02□□□□□ -1.45
PTCD3-205ENST00000464541 POLR3GLQ9BT43 218 aa6.02□□□□□ -1.45
PTCD3-205ENST00000464541 C17orf75Q9HAS0 396 aa6.02□□□□□ -1.45
PTCD3-205ENST00000464541 BTBD18B2RXH4 712 aa6.01□□□□□ -1.45
PTCD3-205ENST00000464541 RTN3O95197 1032 aaPredicted RBP6.01□□□□□ -1.45
PTCD3-205ENST00000464541 MAOAP21397 527 aa6.01□□□□□ -1.45
PTCD3-205ENST00000464541 BSGP35613 385 aa6.01□□□□□ -1.45
PTCD3-205ENST00000464541 HARS2P49590 506 aaKnown RBP6.01□□□□□ -1.45
PTCD3-205ENST00000464541 MPP1Q00013 466 aa6.01□□□□□ -1.45
PTCD3-205ENST00000464541 OLIG2Q13516 323 aa6.01□□□□□ -1.45
PTCD3-205ENST00000464541 NFATC4Q14934 902 aa6.01□□□□□ -1.45
PTCD3-205ENST00000464541 EFNB3Q15768 340 aa6.01□□□□□ -1.45
PTCD3-205ENST00000464541 KIF19Q2TAC6 998 aa6.01□□□□□ -1.45
PTCD3-205ENST00000464541 RUSC1-AS1Q66K80 236 aa6.01□□□□□ -1.45
PTCD3-205ENST00000464541 WDR63Q8IWG1 891 aa6.01□□□□□ -1.45
PTCD3-205ENST00000464541 DIS3L2Q8IYB7 885 aaKnown RBP6.01□□□□□ -1.45
PTCD3-205ENST00000464541 ZNF114Q8NC26 417 aa6.01□□□□□ -1.45
PTCD3-205ENST00000464541 FAM149B1Q96BN6 582 aa6.01□□□□□ -1.45
PTCD3-205ENST00000464541 DUX5Q96PT3 197 aa6.01□□□□□ -1.45
PTCD3-205ENST00000464541 MAP7D2Q96T17 732 aa6.01□□□□□ -1.45
PTCD3-205ENST00000464541 STRA6Q9BX79 667 aa6.01□□□□□ -1.45
PTCD3-205ENST00000464541 ESRP2Q9H6T0 727 aaKnown RBP6.01□□□□□ -1.45
PTCD3-205ENST00000464541 WWOXQ9NZC7 414 aa6.01□□□□□ -1.45
PTCD3-205ENST00000464541 ERVK-11Q9UQG0 969 aa6.01□□□□□ -1.45
PTCD3-205ENST00000464541 NPIPB15A6NHN6 443 aaPredicted RBP6□□□□□ -1.45
PTCD3-205ENST00000464541 B4E171 279 aa6□□□□□ -1.45
PTCD3-205ENST00000464541 SEC31AO94979 1220 aaKnown RBP6□□□□□ -1.45
PTCD3-205ENST00000464541 TSPAN7P41732 249 aa6□□□□□ -1.45
PTCD3-205ENST00000464541 METAP2P50579 478 aaKnown RBP eCLIP6□□□□□ -1.45
PTCD3-205ENST00000464541 CCR9P51686 369 aa6□□□□□ -1.45
PTCD3-205ENST00000464541 RARSP54136 660 aaKnown RBP6□□□□□ -1.45
PTCD3-205ENST00000464541 DHX34Q14147 1143 aaKnown RBP6□□□□□ -1.45
PTCD3-205ENST00000464541 FGFBP1Q14512 234 aa6□□□□□ -1.45
PTCD3-205ENST00000464541 MMEL1Q495T6 779 aa6□□□□□ -1.45
PTCD3-205ENST00000464541 ANKRD54Q6NXT1 300 aa6□□□□□ -1.45
PTCD3-205ENST00000464541 C16orf82Q7Z2V1 217 aa6□□□□□ -1.45
PTCD3-205ENST00000464541 ETNPPLQ8TBG4 499 aa6□□□□□ -1.45
PTCD3-205ENST00000464541 GTF3C6Q969F1 213 aa6□□□□□ -1.45
PTCD3-205ENST00000464541 PABPC5Q96DU9 382 aaKnown RBP6□□□□□ -1.45
PTCD3-205ENST00000464541 ZNF385AQ96PM9 386 aaKnown RBP6□□□□□ -1.45
PTCD3-205ENST00000464541 NAP1L4Q99733 375 aaKnown RBP6□□□□□ -1.45
PTCD3-205ENST00000464541 KRTAP1-5Q9BYS1 174 aa6□□□□□ -1.45
PTCD3-205ENST00000464541 IFIH1Q9BYX4 1025 aaKnown RBP6□□□□□ -1.45
PTCD3-205ENST00000464541 USP44Q9H0E7 712 aa6□□□□□ -1.45
PTCD3-205ENST00000464541 SLCO5A1Q9H2Y9 848 aa6□□□□□ -1.45
PTCD3-205ENST00000464541 SLC6A13Q9NSD5 602 aa6□□□□□ -1.45
PTCD3-205ENST00000464541 IRAK4Q9NWZ3 460 aa6□□□□□ -1.45
PTCD3-205ENST00000464541 OCIAD1Q9NX40 245 aa6□□□□□ -1.45
PTCD3-205ENST00000464541 INTS6Q9UL03 887 aaKnown RBP6□□□□□ -1.45
PTCD3-205ENST00000464541 hDV102S1A0JD36 115 aa5.99□□□□□ -1.45
PTCD3-205ENST00000464541 EPB41L2O43491 1005 aaKnown RBP5.99□□□□□ -1.45
PTCD3-205ENST00000464541 CCNDBP1O95273 360 aa5.99□□□□□ -1.45
PTCD3-205ENST00000464541 PPP1R3DO95685 299 aa5.99□□□□□ -1.45
PTCD3-205ENST00000464541 CLEC3BP05452 202 aa5.99□□□□□ -1.45
PTCD3-205ENST00000464541 HSPA1AP0DMV8 641 aaKnown RBP5.99□□□□□ -1.45
PTCD3-205ENST00000464541 HSPA1BP0DMV9 641 aaKnown RBP5.99□□□□□ -1.45
PTCD3-205ENST00000464541 SRCP12931 536 aa5.99□□□□□ -1.45
PTCD3-205ENST00000464541 COMPP49747 757 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-205ENST00000464541 MYBPHQ13203 477 aa5.99□□□□□ -1.45
PTCD3-205ENST00000464541 DRAP1Q14919 205 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-205ENST00000464541 ATP13A5Q4VNC0 1218 aa5.99□□□□□ -1.45
PTCD3-205ENST00000464541 C9orf57Q5W0N0 161 aa5.99□□□□□ -1.45
PTCD3-205ENST00000464541 FBXO46Q6PJ61 603 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-205ENST00000464541 DSTYKQ6XUX3 929 aa5.99□□□□□ -1.45
PTCD3-205ENST00000464541 DSELQ8IZU8 1212 aa5.99□□□□□ -1.45
PTCD3-205ENST00000464541 PGBD5Q8N414 524 aa5.99□□□□□ -1.45
PTCD3-205ENST00000464541 WFIKKN2Q8TEU8 576 aa5.99□□□□□ -1.45
PTCD3-205ENST00000464541 SMARCE1Q969G3 411 aa5.99□□□□□ -1.45
PTCD3-205ENST00000464541 HAUS8Q9BT25 410 aa5.99□□□□□ -1.45
PTCD3-205ENST00000464541 TKTL2Q9H0I9 626 aa5.99□□□□□ -1.45
PTCD3-205ENST00000464541 SLC9A2Q9UBY0 812 aa5.99□□□□□ -1.45
PTCD3-205ENST00000464541 RCOR1Q9UKL0 485 aa5.99□□□□□ -1.45
PTCD3-205ENST00000464541 TRIP12Q14669 1992 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-205ENST00000464541 GOLGA6L9A6NEM1 432 aa5.98□□□□□ -1.45
PTCD3-205ENST00000464541 SRRM3A6NNA2 597 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-205ENST00000464541 KRTAP29-1A8MX34 341 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-205ENST00000464541 EIF3CLB5ME19 914 aaKnown RBP5.98□□□□□ -1.45
PTCD3-205ENST00000464541 SLC16A5O15375 505 aa5.98□□□□□ -1.45
PTCD3-205ENST00000464541 NDUFS7O75251 213 aa5.98□□□□□ -1.45
PTCD3-205ENST00000464541 TIPRLO75663 272 aa5.98□□□□□ -1.45
PTCD3-205ENST00000464541 RRM1P23921 792 aa5.98□□□□□ -1.45
PTCD3-205ENST00000464541 OLR1P78380 273 aa5.98□□□□□ -1.45
PTCD3-205ENST00000464541 NAE1Q13564 534 aa5.98□□□□□ -1.45
PTCD3-205ENST00000464541 OASLQ15646 514 aaKnown RBP5.98□□□□□ -1.45
PTCD3-205ENST00000464541 DPCR1Q3MIW9 517 aa5.98□□□□□ -1.45
PTCD3-205ENST00000464541 GGNBP1Q5YKI7 109 aa5.98□□□□□ -1.45
PTCD3-205ENST00000464541 B3GNT6Q6ZMB0 384 aa5.98□□□□□ -1.45
PTCD3-205ENST00000464541 QSOX2Q6ZRP7 698 aa5.98□□□□□ -1.45
PTCD3-205ENST00000464541 TAOK1Q7L7X3 1001 aa5.98□□□□□ -1.45
PTCD3-205ENST00000464541 TEX19Q8NA77 164 aa5.98□□□□□ -1.45
PTCD3-205ENST00000464541 CREB3L4Q8TEY5 395 aa5.98□□□□□ -1.45
PTCD3-205ENST00000464541 PSPC1Q8WXF1 523 aaKnown RBP5.98□□□□□ -1.45
PTCD3-205ENST00000464541 SCMH1Q96GD3 660 aa5.98□□□□□ -1.45
PTCD3-205ENST00000464541 MPP4Q96JB8 637 aa5.98□□□□□ -1.45
PTCD3-205ENST00000464541 ADGRG7Q96K78 797 aa5.98□□□□□ -1.45
PTCD3-205ENST00000464541 CTAGE1Q96RT6 745 aa5.98□□□□□ -1.45
PTCD3-205ENST00000464541 PIP5K1AQ99755 562 aa5.98□□□□□ -1.45
PTCD3-205ENST00000464541 KXD1Q9BQD3 176 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms