RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 KIAA1524Q8TCG1 905 aa13.48□□□□□ -0.25
COMMD3-205ENST00000463688 LRRC45Q96CN5 670 aa13.48□□□□□ -0.25
COMMD3-205ENST00000463688 APOLD1Q96LR9 279 aa13.48□□□□□ -0.25
COMMD3-205ENST00000463688 SEMA3CQ99985 751 aa13.48□□□□□ -0.25
COMMD3-205ENST00000463688 NT5MQ9NPB1 228 aa13.48□□□□□ -0.25
COMMD3-205ENST00000463688 ZMIZ1Q9ULJ6 1067 aa13.48□□□□□ -0.25
COMMD3-205ENST00000463688 RAI2Q9Y5P3 530 aa13.48□□□□□ -0.25
COMMD3-205ENST00000463688 CHD5Q8TDI0 1954 aa13.48□□□□□ -0.25
COMMD3-205ENST00000463688 COL5A1P20908 1838 aaPredicted RBP13.48□□□□□ -0.25
COMMD3-205ENST00000463688 RNF103O00237 685 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 TRIM38O00635 465 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 SPINT1O43278 529 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 HEXIM1O94992 359 aaKnown RBP13.47□□□□□ -0.25
COMMD3-205ENST00000463688 PEX11BO96011 259 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 PCCBP05166 539 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 TRIM23P36406 574 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 SRP54P61011 504 aaKnown RBP13.47□□□□□ -0.25
COMMD3-205ENST00000463688 DPTQ07507 201 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 SLC14A2Q15849 920 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 NCBP2-AS2Q69YL0 99 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 PNCKQ6P2M8 343 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 ZNF765Q7L2R6 523 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 RCOR2Q8IZ40 523 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 ARL10Q8N8L6 244 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 OR56A4Q8NGH8 313 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 MAPK15Q8TD08 544 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 NUS1Q96E22 293 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 RBM41Q96IZ5 413 aaKnown RBP13.47□□□□□ -0.25
COMMD3-205ENST00000463688 PPP1R2P1Q96PQ5 205 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 MCCC1Q96RQ3 725 aaPredicted RBP13.47□□□□□ -0.25
COMMD3-205ENST00000463688 CHP1Q99653 195 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 ETNK2Q9NVF9 386 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 PCDHGC4Q9Y5F7 938 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 ADAMTS9Q9P2N4 1935 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 EME2A4GXA9 379 aaPredicted RBP13.47□□□□□ -0.25
COMMD3-205ENST00000463688 TRABD2BA6NFA1 517 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 RRP8O43159 456 aaKnown RBP13.47□□□□□ -0.25
COMMD3-205ENST00000463688 ZRANB2O95218 330 aaKnown RBP eCLIP13.47□□□□□ -0.25
COMMD3-205ENST00000463688 LCA5LO95447 670 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 MLLT3P42568 568 aaPredicted RBP13.47□□□□□ -0.25
COMMD3-205ENST00000463688 PPIDQ08752 370 aaKnown RBP13.47□□□□□ -0.25
COMMD3-205ENST00000463688 EIF2B5Q13144 721 aaKnown RBP13.47□□□□□ -0.25
COMMD3-205ENST00000463688 C6orf132Q5T0Z8 1188 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 HES3Q5TGS1 186 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 TXNRD3NBQ6F5E7 133 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 ARHGAP36Q6ZRI8 547 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 PROSER1Q86XN7 944 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 HID1Q8IV36 788 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 DCBLD1Q8N8Z6 715 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 VAT1Q99536 393 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 TMEM121BQ9BXQ6 578 aaPredicted RBP13.47□□□□□ -0.25
COMMD3-205ENST00000463688 SPTLC3Q9NUV7 552 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 B4GALT6Q9UBX8 382 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 GGT7Q9UJ14 662 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 TTLL3Q9Y4R7 772 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 AK5Q9Y6K8 562 aa13.47□□□□□ -0.25
COMMD3-205ENST00000463688 MFSD11O43934 449 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 OPA1O60313 960 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 TOP3BO95985 862 aaKnown RBP13.46□□□□□ -0.26
COMMD3-205ENST00000463688 MT-CO3P00414 261 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 KRT1P04264 644 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 MYCLP1P12525 358 aaPredicted RBP13.46□□□□□ -0.26
COMMD3-205ENST00000463688 TCF4P15884 667 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 PNLIPP16233 465 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 TGM2P21980 687 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 ACTN2P35609 894 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 RGRP47804 291 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 COPS2P61201 443 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 IFI35P80217 286 aaPredicted RBP13.46□□□□□ -0.26
COMMD3-205ENST00000463688 ILF3Q12906 894 aaKnown RBP eCLIP13.46□□□□□ -0.26
COMMD3-205ENST00000463688 MMRN1Q13201 1228 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 DNAJC3Q13217 504 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 CLPPQ16740 277 aaPredicted RBP13.46□□□□□ -0.26
COMMD3-205ENST00000463688 TFDP3Q5H9I0 405 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 LRRC73Q5JTD7 316 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 SLC9A4Q6AI14 798 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 LRRC69Q6ZNQ3 347 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 RFX6Q8HWS3 928 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 AVL9Q8NBF6 648 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 IFI44Q8TCB0 444 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 VOPP1Q96AW1 172 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 HAUS1Q96CS2 278 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 DTD2Q96FN9 168 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 COQ10AQ96MF6 247 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 LYSMD1Q96S90 227 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 RBM15Q96T37 977 aaKnown RBP eCLIP13.46□□□□□ -0.26
COMMD3-205ENST00000463688 BOCQ9BWV1 1114 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 PACSIN1Q9BY11 444 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 GSDMCQ9BYG8 508 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 MBNL1Q9NR56 388 aaKnown RBP13.46□□□□□ -0.26
COMMD3-205ENST00000463688 UCKL1Q9NWZ5 548 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 TRNAU1APQ9NX07 287 aaKnown RBP13.46□□□□□ -0.26
COMMD3-205ENST00000463688 DTLQ9NZJ0 730 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 IMPACTQ9P2X3 320 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 HEY1Q9Y5J3 304 aa13.46□□□□□ -0.26
COMMD3-205ENST00000463688 A0A0J9YYE9 177 aa13.45□□□□□ -0.26
COMMD3-205ENST00000463688 MUSKO15146 869 aa13.45□□□□□ -0.26
COMMD3-205ENST00000463688 TRBC1P01850 177 aa13.45□□□□□ -0.26
COMMD3-205ENST00000463688 CD48P09326 243 aa13.45□□□□□ -0.26
COMMD3-205ENST00000463688 NAP1L1P55209 391 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms