RNA–Protein interactions for RNA: ENST00000463591.1

PRDM16-204, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 384 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-204ENST00000463591 GKN2Q86XP6 184 aa20.46■□□□□ 0.87
PRDM16-204ENST00000463591 VSTM4Q8IW00 320 aa20.46■□□□□ 0.87
PRDM16-204ENST00000463591 CBARPQ8N350 705 aaPredicted RBP20.46■□□□□ 0.87
PRDM16-204ENST00000463591 PLA2G15Q8NCC3 412 aa20.46■□□□□ 0.87
PRDM16-204ENST00000463591 PCDH19Q8TAB3 1148 aa20.46■□□□□ 0.87
PRDM16-204ENST00000463591 WDR48Q8TAF3 677 aa20.46■□□□□ 0.87
PRDM16-204ENST00000463591 NAT6Q93015 286 aa20.46■□□□□ 0.87
PRDM16-204ENST00000463591 GRAMD1AQ96CP6 724 aa20.46■□□□□ 0.87
PRDM16-204ENST00000463591 COQ10AQ96MF6 247 aa20.46■□□□□ 0.87
PRDM16-204ENST00000463591 TSGA13Q96PP4 275 aa20.46■□□□□ 0.87
PRDM16-204ENST00000463591 PACSIN1Q9BY11 444 aa20.46■□□□□ 0.87
PRDM16-204ENST00000463591 ABHD10Q9NUJ1 306 aa20.46■□□□□ 0.87
PRDM16-204ENST00000463591 LRRK1Q38SD2 2015 aa20.46■□□□□ 0.87
PRDM16-204ENST00000463591 PSMD11O00231 422 aa20.45■□□□□ 0.86
PRDM16-204ENST00000463591 TNFRSF10CO14798 259 aa20.45■□□□□ 0.86
PRDM16-204ENST00000463591 MATN3O15232 486 aa20.45■□□□□ 0.86
PRDM16-204ENST00000463591 KRT10P13645 584 aa20.45■□□□□ 0.86
PRDM16-204ENST00000463591 MX2P20592 715 aa20.45■□□□□ 0.86
PRDM16-204ENST00000463591 ARHGAP25P42331 645 aa20.45■□□□□ 0.86
PRDM16-204ENST00000463591 MAXP61244 160 aa20.45■□□□□ 0.86
PRDM16-204ENST00000463591 TRAF2Q12933 501 aa20.45■□□□□ 0.86
PRDM16-204ENST00000463591 PNCKQ6P2M8 343 aa20.45■□□□□ 0.86
PRDM16-204ENST00000463591 SLC35F3Q8IY50 421 aa20.45■□□□□ 0.86
PRDM16-204ENST00000463591 OR56A4Q8NGH8 313 aa20.45■□□□□ 0.86
PRDM16-204ENST00000463591 MAML1Q92585 1016 aa20.45■□□□□ 0.86
PRDM16-204ENST00000463591 FUBP1Q96AE4 644 aaKnown RBP20.45■□□□□ 0.86
PRDM16-204ENST00000463591 FAF2Q96CS3 445 aa20.45■□□□□ 0.86
PRDM16-204ENST00000463591 SCRN2Q96FV2 425 aa20.45■□□□□ 0.86
PRDM16-204ENST00000463591 CCDC42Q96M95 316 aa20.45■□□□□ 0.86
PRDM16-204ENST00000463591 POLR1EQ9GZS1 481 aaKnown RBP20.45■□□□□ 0.86
PRDM16-204ENST00000463591 NT5MQ9NPB1 228 aa20.45■□□□□ 0.86
PRDM16-204ENST00000463591 PADI4Q9UM07 663 aa20.45■□□□□ 0.86
PRDM16-204ENST00000463591 ANKRD36A6QL64 1941 aa20.45■□□□□ 0.86
PRDM16-204ENST00000463591 ZFHX4Q86UP3 3567 aa20.45■□□□□ 0.86
PRDM16-204ENST00000463591 A8MX80 341 aa20.44■□□□□ 0.86
PRDM16-204ENST00000463591 MFSD11O43934 449 aa20.44■□□□□ 0.86
PRDM16-204ENST00000463591 HEXIM1O94992 359 aaKnown RBP20.44■□□□□ 0.86
PRDM16-204ENST00000463591 PGLSO95336 258 aa20.44■□□□□ 0.86
PRDM16-204ENST00000463591 GM2AP17900 193 aa20.44■□□□□ 0.86
PRDM16-204ENST00000463591 GJC1P36383 396 aa20.44■□□□□ 0.86
PRDM16-204ENST00000463591 TAS2R40P59535 323 aa20.44■□□□□ 0.86
PRDM16-204ENST00000463591 C19orf48Q6RUI8 117 aa20.44■□□□□ 0.86
PRDM16-204ENST00000463591 RD3Q7Z3Z2 195 aa20.44■□□□□ 0.86
PRDM16-204ENST00000463591 RHOT2Q8IXI1 618 aa20.44■□□□□ 0.86
PRDM16-204ENST00000463591 SLC35G2Q8TBE7 412 aa20.44■□□□□ 0.86
PRDM16-204ENST00000463591 RBM15Q96T37 977 aaKnown RBP eCLIP20.44■□□□□ 0.866e-8■■■□□ 19
PRDM16-204ENST00000463591 MYLKQ15746 1914 aa20.44■□□□□ 0.86
PRDM16-204ENST00000463591 MFAP3LO75121 409 aa20.43■□□□□ 0.86
PRDM16-204ENST00000463591 TCEA3O75764 348 aa20.43■□□□□ 0.86
PRDM16-204ENST00000463591 TGM2P21980 687 aa20.43■□□□□ 0.86
PRDM16-204ENST00000463591 KDELR1P24390 212 aa20.43■□□□□ 0.86
PRDM16-204ENST00000463591 ACTN2P35609 894 aa20.43■□□□□ 0.86
PRDM16-204ENST00000463591 ITKQ08881 620 aa20.43■□□□□ 0.86
PRDM16-204ENST00000463591 MESDQ14696 234 aa20.43■□□□□ 0.86
PRDM16-204ENST00000463591 CNGA3Q16281 694 aa20.43■□□□□ 0.86
PRDM16-204ENST00000463591 COL28A1Q2UY09 1125 aa20.43■□□□□ 0.86
PRDM16-204ENST00000463591 ZFYVE27Q5T4F4 411 aa20.43■□□□□ 0.86
PRDM16-204ENST00000463591 ALG1LQ6GMV1 187 aa20.43■□□□□ 0.86
PRDM16-204ENST00000463591 USP45Q70EL2 814 aa20.43■□□□□ 0.86
PRDM16-204ENST00000463591 CPNE8Q86YQ8 564 aa20.43■□□□□ 0.86
PRDM16-204ENST00000463591 LSMEM2Q8N112 164 aa20.43■□□□□ 0.86
PRDM16-204ENST00000463591 ARL10Q8N8L6 244 aa20.43■□□□□ 0.86
PRDM16-204ENST00000463591 OR6C4Q8NGE1 309 aa20.43■□□□□ 0.86
PRDM16-204ENST00000463591 HNRNPLLQ8WVV9 542 aaKnown RBP20.43■□□□□ 0.86
PRDM16-204ENST00000463591 NUS1Q96E22 293 aa20.43■□□□□ 0.86
PRDM16-204ENST00000463591 MCCC1Q96RQ3 725 aaPredicted RBP20.43■□□□□ 0.86
PRDM16-204ENST00000463591 CHP1Q99653 195 aa20.43■□□□□ 0.86
PRDM16-204ENST00000463591 SEMA3CQ99985 751 aa20.43■□□□□ 0.86
PRDM16-204ENST00000463591 WDR26Q9H7D7 661 aa20.43■□□□□ 0.86
PRDM16-204ENST00000463591 NHEJ1Q9H9Q4 299 aaPredicted RBP20.43■□□□□ 0.86
PRDM16-204ENST00000463591 TMEM202A6NGA9 273 aa20.42■□□□□ 0.86
PRDM16-204ENST00000463591 ZNF487B1APH4 448 aa20.42■□□□□ 0.86
PRDM16-204ENST00000463591 RRP8O43159 456 aaKnown RBP20.42■□□□□ 0.86
PRDM16-204ENST00000463591 FZD6O60353 706 aa20.42■□□□□ 0.86
PRDM16-204ENST00000463591 CSO75390 466 aaKnown RBP20.42■□□□□ 0.86
PRDM16-204ENST00000463591 MTA2O94776 668 aa20.42■□□□□ 0.86
PRDM16-204ENST00000463591 TEAD1P28347 426 aa20.42■□□□□ 0.86
PRDM16-204ENST00000463591 EIF2S3P41091 472 aaKnown RBP20.42■□□□□ 0.86
PRDM16-204ENST00000463591 ARHGEF7Q14155 803 aa20.42■□□□□ 0.86
PRDM16-204ENST00000463591 LRRC69Q6ZNQ3 347 aa20.42■□□□□ 0.86
PRDM16-204ENST00000463591 VSIG1Q86XK7 387 aa20.42■□□□□ 0.86
PRDM16-204ENST00000463591 CNGA4Q8IV77 575 aa20.42■□□□□ 0.86
PRDM16-204ENST00000463591 SNIP1Q8TAD8 396 aaKnown RBP20.42■□□□□ 0.86
PRDM16-204ENST00000463591 OR1E3Q8WZA6 343 aa20.42■□□□□ 0.86
PRDM16-204ENST00000463591 FGF11Q92914 225 aa20.42■□□□□ 0.86
PRDM16-204ENST00000463591 DTD2Q96FN9 168 aa20.42■□□□□ 0.86
PRDM16-204ENST00000463591 RNF157Q96PX1 679 aa20.42■□□□□ 0.86
PRDM16-204ENST00000463591 RBM22Q9NW64 420 aaKnown RBP eCLIP20.42■□□□□ 0.865e-6■■■■□ 20.7
PRDM16-204ENST00000463591 GULP1Q9UBP9 304 aa20.42■□□□□ 0.86
PRDM16-204ENST00000463591 GPR34Q9UPC5 381 aa20.42■□□□□ 0.86
PRDM16-204ENST00000463591 RAI2Q9Y5P3 530 aa20.42■□□□□ 0.86
PRDM16-204ENST00000463591 URB1O60287 2271 aaKnown RBP20.41■□□□□ 0.86
PRDM16-204ENST00000463591 BRINP1O60477 761 aa20.41■□□□□ 0.86
PRDM16-204ENST00000463591 CELA2BP08218 269 aaPredicted RBP20.41■□□□□ 0.86
PRDM16-204ENST00000463591 ISXQ2M1V0 245 aa20.41■□□□□ 0.86
PRDM16-204ENST00000463591 PERM1Q5SV97 790 aa20.41■□□□□ 0.86
PRDM16-204ENST00000463591 PQLC3Q8N755 202 aa20.41■□□□□ 0.86
PRDM16-204ENST00000463591 PIH1D2Q8WWB5 315 aa20.41■□□□□ 0.86
PRDM16-204ENST00000463591 HDAC11Q96DB2 347 aa20.41■□□□□ 0.86
PRDM16-204ENST00000463591 PDXPQ96GD0 296 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms