RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 DENRO43583 198 aaKnown RBP16.98■□□□□ 0.31
ACTB-207ENST00000462494 LDB2O43679 373 aa16.98■□□□□ 0.31
ACTB-207ENST00000462494 RAMP2O60895 175 aa16.98■□□□□ 0.31
ACTB-207ENST00000462494 PGM3O95394 542 aa16.98■□□□□ 0.31
ACTB-207ENST00000462494 RPLP2P05387 115 aaKnown RBP16.98■□□□□ 0.31
ACTB-207ENST00000462494 CRHR2Q13324 411 aa16.98■□□□□ 0.31
ACTB-207ENST00000462494 GALNT3Q14435 633 aa16.98■□□□□ 0.31
ACTB-207ENST00000462494 C10orf120Q5SQS8 335 aa16.98■□□□□ 0.31
ACTB-207ENST00000462494 ZNF678Q5SXM1 525 aa16.98■□□□□ 0.31
ACTB-207ENST00000462494 IL23RQ5VWK5 629 aa16.98■□□□□ 0.31
ACTB-207ENST00000462494 CWF19L1Q69YN2 538 aaKnown RBP16.98■□□□□ 0.31
ACTB-207ENST00000462494 EP400NLQ6ZTU2 488 aa16.98■□□□□ 0.31
ACTB-207ENST00000462494 CATSPER1Q8NEC5 780 aa16.98■□□□□ 0.31
ACTB-207ENST00000462494 ARRDC2Q8TBH0 407 aa16.98■□□□□ 0.31
ACTB-207ENST00000462494 PIP4K2CQ8TBX8 421 aa16.98■□□□□ 0.31
ACTB-207ENST00000462494 FBXO32Q969P5 355 aa16.98■□□□□ 0.31
ACTB-207ENST00000462494 ASB9Q96DX5 294 aa16.98■□□□□ 0.31
ACTB-207ENST00000462494 BTN2A3PQ96KV6 586 aa16.98■□□□□ 0.31
ACTB-207ENST00000462494 UPF3AQ9H1J1 476 aaKnown RBP16.98■□□□□ 0.31
ACTB-207ENST00000462494 FBRSL1Q9HCM7 1045 aaKnown RBP16.98■□□□□ 0.31
ACTB-207ENST00000462494 UBAP1Q9NZ09 502 aa16.98■□□□□ 0.31
ACTB-207ENST00000462494 PCDHGB4Q9UN71 923 aa16.98■□□□□ 0.31
ACTB-207ENST00000462494 PCDHGB5Q9Y5G0 923 aa16.98■□□□□ 0.31
ACTB-207ENST00000462494 AK5Q9Y6K8 562 aa16.98■□□□□ 0.31
ACTB-207ENST00000462494 PRSS51A0A1B0GVH4 220 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 RNASEH2AO75792 299 aaKnown RBP16.97■□□□□ 0.31
ACTB-207ENST00000462494 GLP2RO95838 553 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 SNRPB2P08579 225 aaKnown RBP16.97■□□□□ 0.31
ACTB-207ENST00000462494 ATXN1LP0C7T5 689 aaKnown RBP16.97■□□□□ 0.31
ACTB-207ENST00000462494 PIM1P11309 404 aaPredicted RBP16.97■□□□□ 0.31
ACTB-207ENST00000462494 OR1E1P30953 314 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 ACVRL1P37023 503 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 LRP8Q14114 963 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 TRIM25Q14258 630 aaKnown RBP16.97■□□□□ 0.31
ACTB-207ENST00000462494 GEN1Q17RS7 908 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 C6orf52Q5T4I8 152 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 FAM45BPQ6NSW5 357 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 SATL1Q86VE3 508 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 MARVELD2Q8N4S9 558 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 ADCY4Q8NFM4 1077 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 FAM45AQ8TCE6 357 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 PTERQ96BW5 349 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 DNAJC1Q96KC8 554 aaKnown RBP16.97■□□□□ 0.31
ACTB-207ENST00000462494 UNC93B1Q9H1C4 597 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.97■□□□□ 0.31
ACTB-207ENST00000462494 SLC12A8A0AV02 714 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 ADAMTS4O75173 837 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 OAZ2O95190 189 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 GOT2P00505 430 aaKnown RBP16.97■□□□□ 0.31
ACTB-207ENST00000462494 ETS2P15036 469 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 NME5P56597 212 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 GK3PQ14409 553 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 NFE2Q16621 373 aaPredicted RBP16.97■□□□□ 0.31
ACTB-207ENST00000462494 TMEM126BQ8IUX1 230 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 TEX26Q8N6G2 289 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 C8orf48Q96LL4 319 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 SEMA6AQ9H2E6 1030 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 MARCH2Q9P0N8 246 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 RAB26Q9ULW5 256 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 SLC27A5Q9Y2P5 690 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 PCDHB5Q9Y5E4 795 aa16.97■□□□□ 0.31
ACTB-207ENST00000462494 MRASO14807 208 aa16.96■□□□□ 0.31
ACTB-207ENST00000462494 CD3EAPO15446 510 aaKnown RBP16.96■□□□□ 0.31
ACTB-207ENST00000462494 SEPT4O43236 478 aa16.96■□□□□ 0.31
ACTB-207ENST00000462494 UNC50Q53HI1 259 aa16.96■□□□□ 0.31
ACTB-207ENST00000462494 CLLU1OSQ5K130 101 aa16.96■□□□□ 0.31
ACTB-207ENST00000462494 MFN1Q8IWA4 741 aa16.96■□□□□ 0.31
ACTB-207ENST00000462494 OR13C4Q8NGS5 318 aa16.96■□□□□ 0.31
ACTB-207ENST00000462494 C19orf60Q96EN9 201 aa16.96■□□□□ 0.31
ACTB-207ENST00000462494 B3GALT6Q96L58 329 aa16.96■□□□□ 0.31
ACTB-207ENST00000462494 SPAG4Q9NPE6 437 aa16.96■□□□□ 0.31
ACTB-207ENST00000462494 MRGBPQ9NV56 204 aa16.96■□□□□ 0.31
ACTB-207ENST00000462494 SUCOQ9UBS9 1254 aaKnown RBP16.96■□□□□ 0.31
ACTB-207ENST00000462494 APPL1Q9UKG1 709 aa16.96■□□□□ 0.31
ACTB-207ENST00000462494 DOCK4Q8N1I0 1966 aa16.96■□□□□ 0.31
ACTB-207ENST00000462494 LOC285095A0A1B0GVY8 99 aa16.96■□□□□ 0.3
ACTB-207ENST00000462494 PRORSD1PA6NEY8 169 aa16.96■□□□□ 0.3
ACTB-207ENST00000462494 SIX3O95343 332 aaPredicted RBP16.96■□□□□ 0.3
ACTB-207ENST00000462494 INHBCP55103 352 aa16.96■□□□□ 0.3
ACTB-207ENST00000462494 IL10RBQ08334 325 aa16.96■□□□□ 0.3
ACTB-207ENST00000462494 GALNT1Q10472 559 aaPredicted RBP16.96■□□□□ 0.3
ACTB-207ENST00000462494 ZNF235Q14590 738 aa16.96■□□□□ 0.3
ACTB-207ENST00000462494 KIF19Q2TAC6 998 aa16.96■□□□□ 0.3
ACTB-207ENST00000462494 CTXN3Q4LDR2 81 aa16.96■□□□□ 0.3
ACTB-207ENST00000462494 VARS2Q5ST30 1063 aaKnown RBP16.96■□□□□ 0.3
ACTB-207ENST00000462494 ZNF549Q6P9A3 640 aa16.96■□□□□ 0.3
ACTB-207ENST00000462494 CYP2R1Q6VVX0 501 aa16.96■□□□□ 0.3
ACTB-207ENST00000462494 GALNT7Q86SF2 657 aa16.96■□□□□ 0.3
ACTB-207ENST00000462494 RTN4RL1Q86UN2 441 aaPredicted RBP16.96■□□□□ 0.3
ACTB-207ENST00000462494 TICAM1Q8IUC6 712 aa16.96■□□□□ 0.3
ACTB-207ENST00000462494 KLHDC9Q8NEP7 349 aa16.96■□□□□ 0.3
ACTB-207ENST00000462494 LPGAT1Q92604 370 aa16.96■□□□□ 0.3
ACTB-207ENST00000462494 FATE1Q969F0 183 aa16.96■□□□□ 0.3
ACTB-207ENST00000462494 MYEOVQ96EZ4 313 aa16.96■□□□□ 0.3
ACTB-207ENST00000462494 FUBP3Q96I24 572 aaKnown RBP eCLIP16.96■□□□□ 0.3
ACTB-207ENST00000462494 C3orf30Q96M34 536 aa16.96■□□□□ 0.3
ACTB-207ENST00000462494 SH3GL3Q99963 347 aa16.96■□□□□ 0.3
ACTB-207ENST00000462494 SLC39A3Q9BRY0 314 aa16.96■□□□□ 0.3
ACTB-207ENST00000462494 TRMOQ9BU70 441 aa16.96■□□□□ 0.3
ACTB-207ENST00000462494 POLR1EQ9GZS1 481 aaKnown RBP16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms