RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 CHATP28329 748 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 CXCR3P49682 368 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 CLCN3P51790 818 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 STAT2P52630 851 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 PSMC6P62333 389 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 ZBED6P86452 979 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 POU5F1Q01860 360 aaKnown RBP3.25□□□□□ -1.89
VCL-203ENST00000461383 FAM27E3Q08E93 113 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 PKP1Q13835 747 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 SHBQ15464 509 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 ADIPOQQ15848 244 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 CCDC96Q2M329 555 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 ASTE1Q2TB18 679 aaPredicted RBP3.25□□□□□ -1.89
VCL-203ENST00000461383 KRTAP15-1Q3LI76 137 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 SUPT20HL1Q3ZLR7 823 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 SPECC1Q5M775 1068 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 PAPD7Q5XG87 772 aaKnown RBP3.25□□□□□ -1.89
VCL-203ENST00000461383 JADE1Q6IE81 842 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 SLC2A7Q6PXP3 512 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 QSOX2Q6ZRP7 698 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 SEPT14Q6ZU15 432 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 DNAAF5Q86Y56 855 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 MB21D2Q8IYB1 491 aaPredicted RBP3.25□□□□□ -1.89
VCL-203ENST00000461383 RBFAQ8N0V3 343 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 POMGNT2Q8NAT1 580 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 KDM1BQ8NB78 822 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 SCCPDHQ8NBX0 429 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 FAM98AQ8NCA5 519 aaKnown RBP3.25□□□□□ -1.89
VCL-203ENST00000461383 OR14L1PQ8NHC6 308 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 PRPF31Q8WWY3 499 aaKnown RBP3.25□□□□□ -1.89
VCL-203ENST00000461383 DDB2Q92466 427 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 DPF1Q92782 380 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 RRNAD1Q96FB5 475 aaKnown RBP3.25□□□□□ -1.89
VCL-203ENST00000461383 RADILQ96JH8 1075 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 NUDCD1Q96RS6 583 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 SRSF8Q9BRL6 282 aaKnown RBP3.25□□□□□ -1.89
VCL-203ENST00000461383 C1QTNF5Q9BXJ0 243 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 C1QTNF1Q9BXJ1 281 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 POLDIP3Q9BY77 421 aaKnown RBP3.25□□□□□ -1.89
VCL-203ENST00000461383 KLHL4Q9C0H6 718 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 SIL1Q9H173 461 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 HRH4Q9H3N8 390 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 NDST4Q9H3R1 872 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 PDZD7Q9H5P4 517 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 SETD4Q9NVD3 440 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 ARHGEF38Q9NXL2 777 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 FLRT1Q9NZU1 646 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 CWC15Q9P013 229 aaKnown RBP3.25□□□□□ -1.89
VCL-203ENST00000461383 RCOR1Q9UKL0 485 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 PAM16Q9Y3D7 125 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 PTRH2Q9Y3E5 179 aaKnown RBP3.25□□□□□ -1.89
VCL-203ENST00000461383 CEPT1Q9Y6K0 416 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 FAM169AQ9Y6X4 670 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 C1orf226A1L170 272 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 GAGE12JA6NER3 117 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 TMEM202A6NGA9 273 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 FAM90A8PA6NJQ4 464 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 CDRT15L2A8MXV6 281 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 E5RJQ4 531 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 SH2B2O14492 632 aaPredicted RBP3.24□□□□□ -1.89
VCL-203ENST00000461383 MDM4O15151 490 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 KLK8O60259 260 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 TLR2O60603 784 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 PGM3O95394 542 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 LATS1O95835 1130 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 SYF2O95926 243 aaKnown RBP3.24□□□□□ -1.89
VCL-203ENST00000461383 KLKB1P03952 638 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 FAM90A13PP0C7W8 464 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 FAM90A24PP0C7X0 464 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 ACTN1P12814 892 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 IL11P20809 199 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 PON1P27169 355 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 HOXD9P28356 352 aaPredicted RBP3.24□□□□□ -1.89
VCL-203ENST00000461383 DCTDP32321 178 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 PRCPP42785 496 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 MMP13P45452 471 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 ALDH7A1P49419 539 aaKnown RBP3.24□□□□□ -1.89
VCL-203ENST00000461383 ENTPD1P49961 510 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 PMS2P54278 862 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 NHLH1Q02575 133 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 COL10A1Q03692 680 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 AIMP1Q12904 312 aaKnown RBP3.24□□□□□ -1.89
VCL-203ENST00000461383 CDC16Q13042 620 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 DAZAP2Q15038 168 aaPredicted RBP3.24□□□□□ -1.89
VCL-203ENST00000461383 SRSF7Q16629 238 aaKnown RBP eCLIP3.24□□□□□ -1.89
VCL-203ENST00000461383 KRT24Q2M2I5 525 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 C15orf59Q2T9L4 293 aaPredicted RBP3.24□□□□□ -1.89
VCL-203ENST00000461383 MANEAQ5SRI9 462 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 PDXDC1Q6P996 788 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 PARM1Q6UWI2 310 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 DEF8Q6ZN54 512 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 SLC16A12Q6ZSM3 486 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 TRILQ7L0X0 811 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 LINGO2Q7L985 606 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 PATL1Q86TB9 770 aaKnown RBP3.24□□□□□ -1.89
VCL-203ENST00000461383 GPSM1Q86YR5 675 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 WDR63Q8IWG1 891 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 HACE1Q8IYU2 909 aa3.24□□□□□ -1.89
VCL-203ENST00000461383 RNF168Q8IYW5 571 aaPredicted RBP3.24□□□□□ -1.89
VCL-203ENST00000461383 SCML4Q8N228 414 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms