RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 EPC2Q52LR7 807 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 RABL3Q5HYI8 236 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 NOMO2Q5JPE7 1267 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 C1orf220Q5T0J3 134 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 SPOUT1Q5T280 376 aaKnown RBP5□□□□□ -1.61
ATPAF1-203ENST00000460928 ZNF658Q5TYW1 1059 aaPredicted RBP5□□□□□ -1.61
ATPAF1-203ENST00000460928 AFMIDQ63HM1 303 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 JADE1Q6IE81 842 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 CCDC70Q6NSX1 233 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 ARMCX5Q6P1M9 558 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 CD300LGQ6UXG3 332 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 ZNF783Q6ZMS7 281 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 FAM114A1Q8IWE2 563 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 ADSSL1Q8N142 457 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 CEP112Q8N8E3 955 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 OR5B17Q8NGF7 314 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 OR8K1Q8NGG5 319 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 OR5M3Q8NGP4 307 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 SLC25A43Q8WUT9 341 aaPredicted RBP5□□□□□ -1.61
ATPAF1-203ENST00000460928 NELFBQ8WX92 580 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 MAML1Q92585 1016 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 CCDC127Q96BQ5 260 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 SNX22Q96L94 193 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 TMEM117Q9H0C3 514 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 ST6GALNAC4Q9H4F1 302 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 RETREG1Q9H6L5 497 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 C17orf75Q9HAS0 396 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 SMURF2Q9HAU4 748 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 MARCH5Q9NX47 278 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 MYO1AQ9UBC5 1043 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 SEL1LQ9UBV2 794 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 CPSF3Q9UKF6 684 aaKnown RBP5□□□□□ -1.61
ATPAF1-203ENST00000460928 MED16Q9Y2X0 877 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 TMEM98Q9Y2Y6 226 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 STYXL1Q9Y6J8 313 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 DOCK6Q96HP0 2047 aa5□□□□□ -1.61
ATPAF1-203ENST00000460928 VWA8A3KMH1 1905 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 TTC26A0AVF1 554 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 SYCE3A1L190 88 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 PRSS29PA6NIE9 313 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 PI4K2BG5E9Z4 385 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 NRP1O14786 923 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 EIF3DO15371 548 aaKnown RBP eCLIP4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 EXOC3O60645 756 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 MFAP3LO75121 409 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 SKAP2O75563 359 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 AKAP3O75969 853 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 KRT38O76015 456 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 ABHD16AO95870 558 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 ANXA2P07355 339 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 GALTP07902 379 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 CLTAP09496 248 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 DLATP10515 647 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 MTHFD1P11586 935 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 HSD3B1P14060 373 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 ZNF24P17028 368 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 AXLP30530 894 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 BMPR1AP36894 532 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 OR1G1P47890 313 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 ALDH9A1P49189 494 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 CLCNKBP51801 687 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 CCNHP51946 323 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 SH3BGRP55822 239 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 NOMO3P69849 1222 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 TFAMQ00059 246 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 ROR2Q01974 943 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 RNASELQ05823 741 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 SLC13A2Q13183 592 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 CTBP1Q13363 440 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 LAMB3Q13751 1172 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 HABP2Q14520 560 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 CCDC142Q17RM4 750 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 DCAF4L1Q3SXM0 396 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 ZCWPW2Q504Y3 356 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 DCAF17Q5H9S7 520 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 LAIR1Q6GTX8 287 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 C16orf87Q6PH81 154 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 ALKAL1Q6UXT8 129 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 BEND5Q7L4P6 421 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 ELOA2Q8IYF1 753 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 COLGALT2Q8IYK4 626 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 RNF168Q8IYW5 571 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 GUF1Q8N442 669 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 COLGALT1Q8NBJ5 622 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 PHOSPHO2Q8TCD6 241 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 P2RX5Q93086 422 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 TBC1D20Q96BZ9 403 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 IQCDQ96DY2 449 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 CCDC51Q96ER9 411 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 ZNF512Q96ME7 567 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 PPP1R10Q96QC0 940 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 MNTQ99583 582 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 MYOCQ99972 504 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 PYM1Q9BRP8 204 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 ADPGKQ9BRR6 497 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 MTMR12Q9C0I1 747 aa4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 MTIF3Q9H2K0 278 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 ELAC1Q9H777 363 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 RPF1Q9H9Y2 349 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-203ENST00000460928 SLC28A3Q9HAS3 691 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms