RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 PRSS50Q9UI38 385 aa4.17□□□□□ -1.74
ECHDC1-211ENST00000460558 LSM7Q9UK45 103 aaKnown RBP4.17□□□□□ -1.74
ECHDC1-211ENST00000460558 DNM3Q9UQ16 869 aa4.17□□□□□ -1.74
ECHDC1-211ENST00000460558 COMMD10Q9Y6G5 202 aa4.17□□□□□ -1.74
ECHDC1-211ENST00000460558 AKAP9Q99996 3911 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 A0A0A6YYJ9 748 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 ARHGEF35A5YM69 484 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 CCDC169A6NNP5 214 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 A6NNZ2 444 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 PRSS44E7EML9 344 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 H3BML4 177 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 PIRO00625 290 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 CLDN3O15551 220 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 COCHO43405 550 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 LATO43561 262 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 TIMM44O43615 452 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 AP1G1O43747 822 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 RNASEH1O60930 286 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 TOM1L1O75674 476 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 LPLP06858 475 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 CELA3BP08861 270 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 PRKAR1AP10644 381 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 LIFP15018 202 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 CYP11B2P19099 503 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 ITGA3P26006 1051 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 PCSK1P29120 753 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 MATR3P43243 847 aaKnown RBP eCLIP4.16□□□□□ -1.748e-7■■■■■ 31.9
ECHDC1-211ENST00000460558 HTR3AP46098 478 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 RCAN1P53805 252 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 PER3P56645 1201 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 NOP14P78316 857 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 CDC20Q12834 499 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 TAF10Q12962 218 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 ZNF267Q14586 743 aaPredicted RBP4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 PLCL1Q15111 1095 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 KYAT1Q16773 422 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 C14orf28Q4W4Y0 310 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 ZRANB3Q5FWF4 1079 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 HECTD3Q5T447 861 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 KANK2Q63ZY3 851 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 USP45Q70EL2 814 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 HTR3DQ70Z44 454 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 CXXC5Q7LFL8 322 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 TMPRSS9Q7Z410 1059 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 B3GNT8Q7Z7M8 397 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 PRPF39Q86UA1 669 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 MIER2Q8N344 545 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 HIPK4Q8NE63 616 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 OR14C36Q8NHC7 312 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 PPP1R14CQ8TAE6 165 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 HAS1Q92839 578 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 TMEM159Q96B96 161 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 INTS4Q96HW7 963 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 TUBGCP5Q96RT8 1024 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 HAPLN3Q96S86 360 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 NAP1L4Q99733 375 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 B3GNT4Q9C0J1 378 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 INTS2Q9H0H0 1204 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 IL25Q9H293 177 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 PABPC3Q9H361 631 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 SH3GLB2Q9NR46 395 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 KLHL11Q9NVR0 708 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 DDX43Q9NXZ2 648 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 GALNT8Q9NY28 637 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 PLK2Q9NYY3 685 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 FOXJ2Q9P0K8 574 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 VPS54Q9P1Q0 977 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 FBXO10Q9UK96 956 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 GTF3C4Q9UKN8 822 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 FZD4Q9ULV1 537 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 EDARQ9UNE0 448 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 PLA2G4CQ9UP65 541 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 DMTF1Q9Y222 760 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 LOXL2Q9Y4K0 774 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 MN1Q10571 1320 aaPredicted RBP4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 MXRA5Q9NR99 2828 aa4.16□□□□□ -1.74
ECHDC1-211ENST00000460558 A0A087WWV3 80 aa4.15□□□□□ -1.75
ECHDC1-211ENST00000460558 A0A0B4J269 797 aa4.15□□□□□ -1.75
ECHDC1-211ENST00000460558 LACTBL1A8MY62 500 aa4.15□□□□□ -1.75
ECHDC1-211ENST00000460558 KPNA7A9QM74 516 aa4.15□□□□□ -1.75
ECHDC1-211ENST00000460558 D6RAR5 112 aa4.15□□□□□ -1.75
ECHDC1-211ENST00000460558 MUSKO15146 869 aa4.15□□□□□ -1.75
ECHDC1-211ENST00000460558 CCNT1O60563 726 aaKnown RBP4.15□□□□□ -1.75
ECHDC1-211ENST00000460558 HUS1O60921 280 aa4.15□□□□□ -1.75
ECHDC1-211ENST00000460558 RNASEH2AO75792 299 aaKnown RBP4.15□□□□□ -1.75
ECHDC1-211ENST00000460558 NEBLO76041 1014 aa4.15□□□□□ -1.75
ECHDC1-211ENST00000460558 SEC24DO94855 1032 aaPredicted RBP4.15□□□□□ -1.75
ECHDC1-211ENST00000460558 ZBED1O96006 694 aa4.15□□□□□ -1.75
ECHDC1-211ENST00000460558 ENO2P09104 434 aaPredicted RBP4.15□□□□□ -1.75
ECHDC1-211ENST00000460558 RHCEP18577 417 aa4.15□□□□□ -1.75
ECHDC1-211ENST00000460558 ITIH1P19827 911 aa4.15□□□□□ -1.75
ECHDC1-211ENST00000460558 CAPN3P20807 821 aa4.15□□□□□ -1.75
ECHDC1-211ENST00000460558 PDCP20941 246 aa4.15□□□□□ -1.75
ECHDC1-211ENST00000460558 ACAT1P24752 427 aaKnown RBP4.15□□□□□ -1.75
ECHDC1-211ENST00000460558 SSTR4P31391 388 aa4.15□□□□□ -1.75
ECHDC1-211ENST00000460558 CCKBRP32239 447 aa4.15□□□□□ -1.75
ECHDC1-211ENST00000460558 TUBP50607 506 aa4.15□□□□□ -1.75
ECHDC1-211ENST00000460558 MAPK10P53779 464 aa4.15□□□□□ -1.75
ECHDC1-211ENST00000460558 LGALS4P56470 323 aa4.15□□□□□ -1.75
ECHDC1-211ENST00000460558 PEX3P56589 373 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms