RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 FAM46DQ8NEK8 389 aa13.26□□□□□ -0.29
SRRT-206ENST00000460194 ATL2Q8NHH9 583 aa13.26□□□□□ -0.29
SRRT-206ENST00000460194 GPBAR1Q8TDU6 330 aa13.26□□□□□ -0.29
SRRT-206ENST00000460194 SLC12A9Q9BXP2 914 aa13.26□□□□□ -0.29
SRRT-206ENST00000460194 SLC39A8Q9C0K1 460 aa13.26□□□□□ -0.29
SRRT-206ENST00000460194 CLSTN2Q9H4D0 955 aa13.26□□□□□ -0.29
SRRT-206ENST00000460194 SPATS2LQ9NUQ6 558 aaKnown RBP13.26□□□□□ -0.29
SRRT-206ENST00000460194 ADAM22Q9P0K1 906 aa13.26□□□□□ -0.29
SRRT-206ENST00000460194 UBA2Q9UBT2 640 aaPredicted RBP13.26□□□□□ -0.29
SRRT-206ENST00000460194 FGF10O15520 208 aaPredicted RBP13.25□□□□□ -0.29
SRRT-206ENST00000460194 CREB3O43889 395 aa13.25□□□□□ -0.29
SRRT-206ENST00000460194 FGF1P05230 155 aa13.25□□□□□ -0.29
SRRT-206ENST00000460194 CCL4P13236 92 aa13.25□□□□□ -0.29
SRRT-206ENST00000460194 NDST2P52849 883 aa13.25□□□□□ -0.29
SRRT-206ENST00000460194 NSUN2Q08J23 767 aaKnown RBP eCLIP13.25□□□□□ -0.29
SRRT-206ENST00000460194 EFHC2Q5JST6 749 aa13.25□□□□□ -0.29
SRRT-206ENST00000460194 ERAP2Q6P179 960 aa13.25□□□□□ -0.29
SRRT-206ENST00000460194 PNCKQ6P2M8 343 aa13.25□□□□□ -0.29
SRRT-206ENST00000460194 CYP4V2Q6ZWL3 525 aaPredicted RBP13.25□□□□□ -0.29
SRRT-206ENST00000460194 DPPA4Q7L190 304 aa13.25□□□□□ -0.29
SRRT-206ENST00000460194 SRLQ86TD4 932 aa13.25□□□□□ -0.29
SRRT-206ENST00000460194 PTCD2Q8WV60 388 aaKnown RBP13.25□□□□□ -0.29
SRRT-206ENST00000460194 PMEPA1Q969W9 287 aa13.25□□□□□ -0.29
SRRT-206ENST00000460194 COQ10AQ96MF6 247 aa13.25□□□□□ -0.29
SRRT-206ENST00000460194 CMKLR1Q99788 373 aa13.25□□□□□ -0.29
SRRT-206ENST00000460194 CATSPERBQ9H7T0 1116 aa13.25□□□□□ -0.29
SRRT-206ENST00000460194 NLRC4Q9NPP4 1024 aa13.25□□□□□ -0.29
SRRT-206ENST00000460194 TAB2Q9NYJ8 693 aa13.25□□□□□ -0.29
SRRT-206ENST00000460194 NBASA2RRP1 2371 aa13.24□□□□□ -0.29
SRRT-206ENST00000460194 PRSS38A1L453 326 aa13.24□□□□□ -0.29
SRRT-206ENST00000460194 CALB1P05937 261 aa13.24□□□□□ -0.29
SRRT-206ENST00000460194 CEACAM5P06731 702 aa13.24□□□□□ -0.29
SRRT-206ENST00000460194 XPAP23025 273 aaPredicted RBP13.24□□□□□ -0.29
SRRT-206ENST00000460194 CD82P27701 267 aa13.24□□□□□ -0.29
SRRT-206ENST00000460194 CD1CP29017 333 aa13.24□□□□□ -0.29
SRRT-206ENST00000460194 HTR7P34969 479 aa13.24□□□□□ -0.29
SRRT-206ENST00000460194 STAT1P42224 750 aa13.24□□□□□ -0.29
SRRT-206ENST00000460194 NSFP46459 744 aaKnown RBP13.24□□□□□ -0.29
SRRT-206ENST00000460194 PAPOLAP51003 745 aaKnown RBP13.24□□□□□ -0.29
SRRT-206ENST00000460194 SQSTM1Q13501 440 aa13.24□□□□□ -0.29
SRRT-206ENST00000460194 CA9Q16790 459 aa13.24□□□□□ -0.29
SRRT-206ENST00000460194 CT47A1Q5JQC4 288 aaPredicted RBP13.24□□□□□ -0.29
SRRT-206ENST00000460194 MANEAQ5SRI9 462 aa13.24□□□□□ -0.29
SRRT-206ENST00000460194 ATG14Q6ZNE5 492 aa13.24□□□□□ -0.29
SRRT-206ENST00000460194 ARHGAP36Q6ZRI8 547 aa13.24□□□□□ -0.29
SRRT-206ENST00000460194 TAF8Q7Z7C8 310 aa13.24□□□□□ -0.29
SRRT-206ENST00000460194 ZNF354CQ86Y25 554 aa13.24□□□□□ -0.29
SRRT-206ENST00000460194 NPWQ8N729 165 aa13.24□□□□□ -0.29
SRRT-206ENST00000460194 CELF6Q96J87 481 aaKnown RBP13.24□□□□□ -0.29
SRRT-206ENST00000460194 NCAPGQ9BPX3 1015 aa13.24□□□□□ -0.29
SRRT-206ENST00000460194 NUDT22Q9BRQ3 303 aa13.24□□□□□ -0.29
SRRT-206ENST00000460194 CNPY3Q9BT09 278 aa13.24□□□□□ -0.29
SRRT-206ENST00000460194 SYT11Q9BT88 431 aa13.24□□□□□ -0.29
SRRT-206ENST00000460194 SELENOOQ9BVL4 669 aa13.24□□□□□ -0.29
SRRT-206ENST00000460194 FAM117AQ9C073 453 aa13.24□□□□□ -0.29
SRRT-206ENST00000460194 RDH14Q9HBH5 336 aa13.24□□□□□ -0.29
SRRT-206ENST00000460194 FAM207AQ9NSI2 230 aaPredicted RBP13.24□□□□□ -0.29
SRRT-206ENST00000460194 GEMIN8Q9NWZ8 242 aaKnown RBP13.24□□□□□ -0.29
SRRT-206ENST00000460194 SEPT10Q9P0V9 454 aa13.24□□□□□ -0.29
SRRT-206ENST00000460194 PCDHGA3Q9Y5H0 932 aa13.24□□□□□ -0.29
SRRT-206ENST00000460194 SPENQ96T58 3664 aaKnown RBP13.23□□□□□ -0.29
SRRT-206ENST00000460194 IGHV5-10-1A0A0J9YXX1 117 aa13.23□□□□□ -0.29
SRRT-206ENST00000460194 B4DGG1 531 aa13.23□□□□□ -0.29
SRRT-206ENST00000460194 AGRPO00253 132 aa13.23□□□□□ -0.29
SRRT-206ENST00000460194 CACNB4O00305 520 aaPredicted RBP13.23□□□□□ -0.29
SRRT-206ENST00000460194 CPNE6O95741 557 aa13.23□□□□□ -0.29
SRRT-206ENST00000460194 PEX11BO96011 259 aa13.23□□□□□ -0.29
SRRT-206ENST00000460194 FGF3P11487 239 aaPredicted RBP13.23□□□□□ -0.29
SRRT-206ENST00000460194 SFTPCP11686 197 aa13.23□□□□□ -0.29
SRRT-206ENST00000460194 CCNB1P14635 433 aa13.23□□□□□ -0.29
SRRT-206ENST00000460194 MAPK10P53779 464 aa13.23□□□□□ -0.29
SRRT-206ENST00000460194 MAZP56270 477 aaKnown RBP13.23□□□□□ -0.29
SRRT-206ENST00000460194 KRT31Q15323 416 aa13.23□□□□□ -0.29
SRRT-206ENST00000460194 CLPPQ16740 277 aaPredicted RBP13.23□□□□□ -0.29
SRRT-206ENST00000460194 COLEC12Q5KU26 742 aa13.23□□□□□ -0.29
SRRT-206ENST00000460194 SCYL2Q6P3W7 929 aa13.23□□□□□ -0.29
SRRT-206ENST00000460194 TP53INP2Q8IXH6 220 aa13.23□□□□□ -0.29
SRRT-206ENST00000460194 NKD1Q969G9 470 aa13.23□□□□□ -0.29
SRRT-206ENST00000460194 MCEEQ96PE7 176 aa13.23□□□□□ -0.29
SRRT-206ENST00000460194 PEBP4Q96S96 227 aa13.23□□□□□ -0.29
SRRT-206ENST00000460194 TEX101Q9BY14 249 aa13.23□□□□□ -0.29
SRRT-206ENST00000460194 FRMD8Q9BZ67 464 aaPredicted RBP13.23□□□□□ -0.29
SRRT-206ENST00000460194 SPRY4Q9C004 299 aa13.23□□□□□ -0.29
SRRT-206ENST00000460194 VPS16Q9H269 839 aa13.23□□□□□ -0.29
SRRT-206ENST00000460194 DPEP2Q9H4A9 486 aa13.23□□□□□ -0.29
SRRT-206ENST00000460194 CYP4F12Q9HCS2 524 aa13.23□□□□□ -0.29
SRRT-206ENST00000460194 HEMK1Q9Y5R4 338 aaPredicted RBP13.23□□□□□ -0.29
SRRT-206ENST00000460194 LRRK2Q5S007 2527 aa13.23□□□□□ -0.29
SRRT-206ENST00000460194 PES1O00541 588 aaKnown RBP13.22□□□□□ -0.29
SRRT-206ENST00000460194 HGSO14964 777 aaPredicted RBP13.22□□□□□ -0.29
SRRT-206ENST00000460194 HTRA2O43464 458 aaPredicted RBP13.22□□□□□ -0.29
SRRT-206ENST00000460194 ELFN1P0C7U0 828 aa13.22□□□□□ -0.29
SRRT-206ENST00000460194 MYCLP1P12525 358 aaPredicted RBP13.22□□□□□ -0.29
SRRT-206ENST00000460194 CR2P20023 1033 aa13.22□□□□□ -0.29
SRRT-206ENST00000460194 KELP23276 732 aa13.22□□□□□ -0.29
SRRT-206ENST00000460194 SERPINA4P29622 427 aa13.22□□□□□ -0.29
SRRT-206ENST00000460194 OR1D5P58170 312 aa13.22□□□□□ -0.29
SRRT-206ENST00000460194 PIM3Q86V86 326 aa13.22□□□□□ -0.29
SRRT-206ENST00000460194 NAGSQ8N159 534 aa13.22□□□□□ -0.29
SRRT-206ENST00000460194 RCBTB1Q8NDN9 531 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms