RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 DUSP16Q9BY84 665 aa15.86■□□□□ 0.13
CMTM3-203ENST00000460097 NUF2Q9BZD4 464 aa15.86■□□□□ 0.13
CMTM3-203ENST00000460097 OSBPL6Q9BZF3 934 aa15.86■□□□□ 0.13
CMTM3-203ENST00000460097 CSNK1G1Q9HCP0 422 aa15.86■□□□□ 0.13
CMTM3-203ENST00000460097 PNPLA3Q9NST1 481 aa15.86■□□□□ 0.13
CMTM3-203ENST00000460097 VTI1BQ9UEU0 232 aa15.86■□□□□ 0.13
CMTM3-203ENST00000460097 H3BNH8 94 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 H3BSA7 217 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 MATN2O00339 956 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 ATP6V1G1O75348 118 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 BEST1O76090 585 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 MPOP05164 745 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 HNRNPCP07910 306 aaKnown RBP eCLIP15.85■□□□□ 0.13
CMTM3-203ENST00000460097 ATP6V1B1P15313 513 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 GPD2P43304 727 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 NUDT2P50583 147 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 THOP1P52888 689 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 EPHA5P54756 1037 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 STILQ15468 1287 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 TJAP1Q5JTD0 557 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 ANKRD52Q8NB46 1076 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 SGF29Q96ES7 293 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 LRRC3Q9BY71 257 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 EPS15L1Q9UBC2 864 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 HESX1Q9UBX0 185 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 TJP2Q9UDY2 1190 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 IPO11Q9UI26 975 aaKnown RBP15.85■□□□□ 0.13
CMTM3-203ENST00000460097 TSPAN16Q9UKR8 245 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 MAGED2Q9UNF1 606 aaPredicted RBP15.85■□□□□ 0.13
CMTM3-203ENST00000460097 MRPS23Q9Y3D9 190 aaKnown RBP15.85■□□□□ 0.13
CMTM3-203ENST00000460097 A0A0C4DFX4 3053 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 C2orf16Q68DN1 1984 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 KANSL1LA0AUZ9 987 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 METTL18O95568 372 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 FGF19O95750 216 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 HSPA4LO95757 839 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 HMGA1P17096 107 aaKnown RBP15.85■□□□□ 0.13
CMTM3-203ENST00000460097 NPR3P17342 541 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 PPARGP37231 505 aaPredicted RBP15.85■□□□□ 0.13
CMTM3-203ENST00000460097 GALK1P51570 392 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 CDKL1Q00532 357 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 PDAP1Q13442 181 aaKnown RBP15.85■□□□□ 0.13
CMTM3-203ENST00000460097 KCTD21Q4G0X4 260 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 LCLAT1Q6UWP7 414 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 CLEC20AQ6ZU45 233 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 CLEC14AQ86T13 490 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 TMC8Q8IU68 726 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 MPP5Q8N3R9 675 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 TERB1Q8NA31 727 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 ZMIZ2Q8NF64 920 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 RXFP2Q8WXD0 754 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 CCT7Q99832 543 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 PKP2Q99959 881 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 EFCAB1Q9HAE3 211 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 TMEM216Q9P0N5 145 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 SUCOQ9UBS9 1254 aaKnown RBP15.85■□□□□ 0.13
CMTM3-203ENST00000460097 APPL1Q9UKG1 709 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 PAIP2BQ9ULR5 123 aaKnown RBP15.85■□□□□ 0.13
CMTM3-203ENST00000460097 MYRFQ9Y2G1 1151 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 RAP2CQ9Y3L5 183 aa15.85■□□□□ 0.13
CMTM3-203ENST00000460097 DOCK6Q96HP0 2047 aa15.84■□□□□ 0.13
CMTM3-203ENST00000460097 PTPRDP23468 1912 aa15.84■□□□□ 0.13
CMTM3-203ENST00000460097 VCANP13611 3396 aa15.84■□□□□ 0.13
CMTM3-203ENST00000460097 HDAC3O15379 428 aa15.84■□□□□ 0.13
CMTM3-203ENST00000460097 MICAL2O94851 1124 aa15.84■□□□□ 0.13
CMTM3-203ENST00000460097 XRCC1P18887 633 aaPredicted RBP15.84■□□□□ 0.13
CMTM3-203ENST00000460097 HADHAP40939 763 aa15.84■□□□□ 0.13
CMTM3-203ENST00000460097 MRPS22P82650 360 aaKnown RBP15.84■□□□□ 0.13
CMTM3-203ENST00000460097 TRAP1Q12931 704 aaKnown RBP15.84■□□□□ 0.13
CMTM3-203ENST00000460097 GOLGA7BQ2TAP0 167 aa15.84■□□□□ 0.13
CMTM3-203ENST00000460097 SLC9B1Q4ZJI4 515 aa15.84■□□□□ 0.13
CMTM3-203ENST00000460097 SPANXN3Q5MJ09 141 aa15.84■□□□□ 0.13
CMTM3-203ENST00000460097 C6orf52Q5T4I8 152 aa15.84■□□□□ 0.13
CMTM3-203ENST00000460097 SYCP2LQ5T4T6 812 aa15.84■□□□□ 0.13
CMTM3-203ENST00000460097 FAM102AQ5T9C2 384 aaPredicted RBP15.84■□□□□ 0.13
CMTM3-203ENST00000460097 IYDQ6PHW0 289 aa15.84■□□□□ 0.13
CMTM3-203ENST00000460097 PATL1Q86TB9 770 aaKnown RBP15.84■□□□□ 0.13
CMTM3-203ENST00000460097 CEP70Q8NHQ1 597 aa15.84■□□□□ 0.13
CMTM3-203ENST00000460097 ITFG1Q8TB96 612 aa15.84■□□□□ 0.13
CMTM3-203ENST00000460097 MYRFLQ96LU7 910 aa15.84■□□□□ 0.13
CMTM3-203ENST00000460097 CDRT15Q96T59 188 aa15.84■□□□□ 0.13
CMTM3-203ENST00000460097 ILKAPQ9H0C8 392 aaPredicted RBP15.84■□□□□ 0.13
CMTM3-203ENST00000460097 ZNF334Q9HCZ1 680 aaPredicted RBP15.84■□□□□ 0.13
CMTM3-203ENST00000460097 UXTQ9UBK9 157 aaPredicted RBP15.84■□□□□ 0.13
CMTM3-203ENST00000460097 SLC8A2Q9UPR5 921 aa15.84■□□□□ 0.13
CMTM3-203ENST00000460097 DYTNA2CJ06 578 aa15.83■□□□□ 0.12
CMTM3-203ENST00000460097 TRIM64A6NGJ6 449 aa15.83■□□□□ 0.12
CMTM3-203ENST00000460097 TRIM38O00635 465 aa15.83■□□□□ 0.12
CMTM3-203ENST00000460097 TRIM13O60858 407 aa15.83■□□□□ 0.12
CMTM3-203ENST00000460097 TOP3BO95985 862 aaKnown RBP15.83■□□□□ 0.12
CMTM3-203ENST00000460097 PDGFRAP16234 1089 aa15.83■□□□□ 0.12
CMTM3-203ENST00000460097 PORP16435 677 aaPredicted RBP15.83■□□□□ 0.12
CMTM3-203ENST00000460097 GABRR2P28476 465 aa15.83■□□□□ 0.12
CMTM3-203ENST00000460097 TTKP33981 857 aa15.83■□□□□ 0.12
CMTM3-203ENST00000460097 CCR2P41597 374 aa15.83■□□□□ 0.12
CMTM3-203ENST00000460097 CBX3Q13185 183 aa15.83■□□□□ 0.12
CMTM3-203ENST00000460097 CEACAM7Q14002 265 aa15.83■□□□□ 0.12
CMTM3-203ENST00000460097 PRSS36Q5K4E3 855 aa15.83■□□□□ 0.12
CMTM3-203ENST00000460097 VWA5B1Q5TIE3 1220 aa15.83■□□□□ 0.12
CMTM3-203ENST00000460097 TRIM67Q6ZTA4 783 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms