RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 CELSR3Q9NYQ7 3312 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 FAM149AA5PLN7 773 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 MUSKO15146 869 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 MATN3O15232 486 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 RECQL5O94762 991 aaPredicted RBP10.04□□□□□ -0.8
HDLBP-228ENST00000459788 CPP00450 1065 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 TNFP01375 233 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 CTSEP14091 401 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 TCF4P15884 667 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 PNLIPP16233 465 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 TSHRP16473 764 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 ZNF30P17039 623 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 VIPR1P32241 457 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 GARSP41250 739 aaKnown RBP10.04□□□□□ -0.8
HDLBP-228ENST00000459788 LSSP48449 732 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 ADKP55263 362 aaKnown RBP10.04□□□□□ -0.8
HDLBP-228ENST00000459788 ERVPABLB-1P60509 514 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 SRP54P61011 504 aaKnown RBP10.04□□□□□ -0.8
HDLBP-228ENST00000459788 DPTQ07507 201 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 DPYSL3Q14195 570 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 INPP5AQ14642 412 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 ANKRD20A8PQ5CZ79 823 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 ZNF542PQ5EBM4 170 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 LRRC73Q5JTD7 316 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 LRRC38Q5VT99 294 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 USP45Q70EL2 814 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 CNGA4Q8IV77 575 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 VSTM4Q8IW00 320 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 PAF1Q8N7H5 531 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 ARL10Q8N8L6 244 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 KCTD6Q8NC69 237 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 IFI44Q8TCB0 444 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 MAPK15Q8TD08 544 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 FGF11Q92914 225 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 COQ10AQ96MF6 247 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 ZNF578Q96N58 590 aaPredicted RBP10.04□□□□□ -0.8
HDLBP-228ENST00000459788 RBM15Q96T37 977 aaKnown RBP eCLIP10.04□□□□□ -0.83e-8■□□□□ 10.2
HDLBP-228ENST00000459788 DEF6Q9H4E7 631 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 KLQ9UEF7 1012 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 LHX6Q9UPM6 363 aa10.04□□□□□ -0.8
HDLBP-228ENST00000459788 YY2O15391 372 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 RRP8O43159 456 aaKnown RBP10.03□□□□□ -0.8
HDLBP-228ENST00000459788 AKR1B10O60218 316 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 FZD6O60353 706 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 GCATO75600 419 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 NEBLO76041 1014 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 HEXIM1O94992 359 aaKnown RBP10.03□□□□□ -0.8
HDLBP-228ENST00000459788 PGLSO95336 258 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 MYCLP1P12525 358 aaPredicted RBP10.03□□□□□ -0.8
HDLBP-228ENST00000459788 ZFXP17010 805 aaPredicted RBP10.03□□□□□ -0.8
HDLBP-228ENST00000459788 ITIH2P19823 946 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 EIF2S3P41091 472 aaKnown RBP10.03□□□□□ -0.8
HDLBP-228ENST00000459788 SLC1A1P43005 524 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 SLC14A2Q15849 920 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 CLPPQ16740 277 aaPredicted RBP10.03□□□□□ -0.8
HDLBP-228ENST00000459788 ISXQ2M1V0 245 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 ALG11Q2TAA5 492 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 TBC1D25Q3MII6 688 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 ARMC12Q5T9G4 340 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 NCBP2-AS2Q69YL0 99 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 TXNRD3NBQ6F5E7 133 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 PNCKQ6P2M8 343 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 OGFOD3Q6PK18 319 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 ENPP7Q6UWV6 458 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 LRRC69Q6ZNQ3 347 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 RBM44Q6ZP01 1051 aaKnown RBP10.03□□□□□ -0.8
HDLBP-228ENST00000459788 ZNF765Q7L2R6 523 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 EFL1Q7Z2Z2 1120 aaKnown RBP10.03□□□□□ -0.8
HDLBP-228ENST00000459788 HID1Q8IV36 788 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 SLC35F3Q8IY50 421 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 RBFAQ8N0V3 343 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 PGBD5Q8N414 524 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 NETO2Q8NC67 525 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 OR56A4Q8NGH8 313 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 PCDH19Q8TAB3 1148 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 HDAC11Q96DB2 347 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 DTD2Q96FN9 168 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 CCDC42Q96M95 316 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 ZNF830Q96NB3 372 aaPredicted RBP10.03□□□□□ -0.8
HDLBP-228ENST00000459788 TEX101Q9BY14 249 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 CLPBQ9H078 707 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 BRD8Q9H0E9 1235 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 TSPY26PQ9H489 355 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 WDR26Q9H7D7 661 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 POLR1BQ9H9Y6 1135 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 NOD2Q9HC29 1040 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 PHPT1Q9NRX4 125 aaPredicted RBP10.03□□□□□ -0.8
HDLBP-228ENST00000459788 ABHD10Q9NUJ1 306 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 B4GALT6Q9UBX8 382 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 PADI4Q9UM07 663 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 DOLKQ9UPQ8 538 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 RAXQ9Y2V3 346 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 COQ6Q9Y2Z9 468 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 AK5Q9Y6K8 562 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 AHCTF1Q8WYP5 2266 aa10.03□□□□□ -0.8
HDLBP-228ENST00000459788 RGSL1A5PLK6 1076 aa10.02□□□□□ -0.81
HDLBP-228ENST00000459788 NTN3O00634 580 aaPredicted RBP10.02□□□□□ -0.81
HDLBP-228ENST00000459788 ZW10O43264 779 aa10.02□□□□□ -0.81
HDLBP-228ENST00000459788 MFAP3LO75121 409 aa10.02□□□□□ -0.81
HDLBP-228ENST00000459788 GM2AP17900 193 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms