RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 MIR1-1HGQ9H1L0 117 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 PCDH9Q9HC56 1237 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 CAPN10Q9HC96 672 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 VPS45Q9NRW7 570 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 SEMA4GQ9NTN9 838 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 UBP1Q9NZI7 540 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 FAM153AQ9UHL3 310 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 RPL26L1Q9UNX3 145 aaKnown RBP10.1□□□□□ -0.79
ATG4A-206ENST00000457035 DMTF1Q9Y222 760 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 ZKSCAN5Q9Y2L8 839 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.1□□□□□ -0.79
ATG4A-206ENST00000457035 ATXN2Q99700 1313 aaKnown RBP10.09□□□□□ -0.79
ATG4A-206ENST00000457035 A0A0J9YYE9 177 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 A0A1B0GTW7 788 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 A0A1W2PR77 199 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 A8MX80 341 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 PRR5-ARHGAP8B1AHC4 643 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 ZNF185O15231 689 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 OPHN1O60890 802 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 PMPCBO75439 489 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 CPP00450 1065 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 EPOP01588 193 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 TRBC1P01850 177 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 WNT1P04628 370 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 ITGAVP06756 1048 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 GNSP15586 552 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 GM2AP17900 193 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 HNF1BP35680 557 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 CSNK1EP49674 416 aaKnown RBP10.09□□□□□ -0.79
ATG4A-206ENST00000457035 LIG3P49916 1009 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 RACK1P63244 317 aaKnown RBP10.09□□□□□ -0.79
ATG4A-206ENST00000457035 ARHGAP8P85298 464 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 CDK18Q07002 472 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 SNX1Q13596 522 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 AGERQ15109 404 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 CDKN3Q16667 212 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 QPCTQ16769 361 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 SETMARQ53H47 684 aaPredicted RBP10.09□□□□□ -0.79
ATG4A-206ENST00000457035 TRIM61Q5EBN2 209 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 NYAP1Q6ZVC0 841 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 KDELC2Q7Z4H8 507 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 KLHDC8BQ8IXV7 354 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 ZCCHC9Q8N567 271 aaKnown RBP10.09□□□□□ -0.79
ATG4A-206ENST00000457035 TMEM145Q8NBT3 493 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 CENPTQ96BT3 561 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 SERAC1Q96JX3 654 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 MRGPRX2Q96LB1 330 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 LENG8Q96PV6 779 aaPredicted RBP10.09□□□□□ -0.79
ATG4A-206ENST00000457035 LYSMD1Q96S90 227 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 NAPGQ99747 312 aaPredicted RBP10.09□□□□□ -0.79
ATG4A-206ENST00000457035 WRAP53Q9BUR4 548 aaKnown RBP10.09□□□□□ -0.79
ATG4A-206ENST00000457035 GBA3Q9H227 469 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 TM9SF3Q9HD45 589 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 HOMER3Q9NSC5 361 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 SMARCAL1Q9NZC9 954 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 B4GALT6Q9UBX8 382 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 SUSD2Q9UGT4 822 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 RSPH14Q9UHP6 348 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 SLC6A14Q9UN76 642 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 ZNF148Q9UQR1 794 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 HS3ST3A1Q9Y663 406 aa10.09□□□□□ -0.79
ATG4A-206ENST00000457035 ARHGEF17Q96PE2 2063 aaPredicted RBP10.09□□□□□ -0.79
ATG4A-206ENST00000457035 A0A0U1RQS6 177 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 CTAGE9A4FU28 777 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 NPIPB15A6NHN6 443 aaPredicted RBP10.08□□□□□ -0.8
ATG4A-206ENST00000457035 F5H423 210 aaPredicted RBP10.08□□□□□ -0.8
ATG4A-206ENST00000457035 PRAMEF26H0Y7S4 382 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 KHNYNO15037 678 aaKnown RBP10.08□□□□□ -0.8
ATG4A-206ENST00000457035 RAD51BO15315 384 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 TM7SF2O76062 418 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 STK10O94804 968 aaKnown RBP10.08□□□□□ -0.8
ATG4A-206ENST00000457035 HEXIM1O94992 359 aaKnown RBP10.08□□□□□ -0.8
ATG4A-206ENST00000457035 METTL18O95568 372 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 ALPIP09923 528 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 CYP2A6P11509 494 aaPredicted RBP10.08□□□□□ -0.8
ATG4A-206ENST00000457035 C6P13671 934 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 CTPS1P17812 591 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 TCP1P17987 556 aaKnown RBP10.08□□□□□ -0.8
ATG4A-206ENST00000457035 SDHBP21912 280 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 CA4P22748 312 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 LHCGRP22888 699 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 PSMB4P28070 264 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 VIPR1P32241 457 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 KCNJ1P48048 391 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 WNT3AP56704 352 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 ETF1P62495 437 aaKnown RBP10.08□□□□□ -0.8
ATG4A-206ENST00000457035 BNC1Q01954 994 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 PTSQ03393 145 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 SGCGQ13326 291 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 MPP3Q13368 585 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 SF3A2Q15428 464 aaKnown RBP10.08□□□□□ -0.8
ATG4A-206ENST00000457035 CYP1B1Q16678 543 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 PARP6Q2NL67 630 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 P3H1Q32P28 736 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 ITPRIPL1Q6GPH6 555 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 TCEAL6Q6IPX3 200 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 NAPEPLDQ6IQ20 393 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 CRTC1Q6UUV9 634 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 RABEPKQ7Z6M1 372 aa10.08□□□□□ -0.8
ATG4A-206ENST00000457035 CREG2Q8IUH2 290 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms