RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	RAB15	P59190	212 aa		13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953	MC1R	Q01726	317 aa		13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953	KRT31	Q15323	416 aa		13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953	FILIP1L	Q4L180	1135 aa		13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953	DCAF12	Q5T6F0	453 aa		13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953	LEKR1	Q6ZMV7	388 aa		13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953	OR4D9	Q8NGE8	314 aa		13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953	HCAR2	Q8TDS4	363 aa		13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953	CASKIN2	Q8WXE0	1202 aa		13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953	FUBP1	Q96AE4	644 aa	Known RBP	13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953	HMCES	Q96FZ2	354 aa		13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953	TEFM	Q96QE5	360 aa	Known RBP	13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953	HSD3B7	Q9H2F3	369 aa		13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953	PCDH12	Q9NPG4	1184 aa		13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953	NDFIP2	Q9NV92	336 aa		13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953	CSMD1	Q96PZ7	3565 aa		13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953	KDELR3	O43731	214 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	DUX1	O43812	170 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	RAMP2	O60895	175 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	HOXC4	P09017	264 aa	Predicted RBP	13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	RHOQ	P17081	205 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	MAP4	P27816	1152 aa	Known RBP	13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	OAS2	P29728	719 aa	Known RBP	13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	KRT9	P35527	623 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	LIG3	P49916	1009 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	MLLT10	P55197	1068 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	MAZ	P56270	477 aa	Known RBP	13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	NRG1	Q02297	640 aa	Predicted RBP	13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	PTK2	Q05397	1052 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	UGP2	Q16851	508 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	TSR1	Q2NL82	804 aa	Known RBP	13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	DEFB109B	Q30KR1	87 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	VWA3B	Q502W6	1294 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	CRTC2	Q53ET0	693 aa	Predicted RBP	13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	FHL5	Q5TD97	284 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	SMYD5	Q6GMV2	418 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	ERAP2	Q6P179	960 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	BNIPL	Q7Z465	357 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	NLRP14	Q86W24	1093 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	FAM131B	Q86XD5	332 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	NLGN4X	Q8N0W4	816 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	TEX19	Q8NA77	164 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	PLA2G15	Q8NCC3	412 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	CCL4L1	Q8NHW4	92 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	SHC3	Q92529	594 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	DPYSL5	Q9BPU6	564 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	VPS16	Q9H269	839 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	CYP4F12	Q9HCS2	524 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	MRPL40	Q9NQ50	206 aa	Known RBP	13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	OR12D3	Q9UGF7	316 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	LIMA1	Q9UHB6	759 aa	Known RBP	13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	DNAI1	Q9UI46	699 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	TP53TG5	Q9Y2B4	290 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	CACNA1D	Q01668	2161 aa		13.22	□□□□□ -0.29
SNHG17-208	ENST00000456953	ANKRD36	A6QL64	1941 aa		13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	TSPAN11	A1L157	253 aa		13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	BUB1	O43683	1085 aa		13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	VPS4B	O75351	444 aa		13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	THRA	P10827	490 aa		13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	FLT3	P36888	993 aa		13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	MMP12	P39900	470 aa		13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	STAT1	P42224	750 aa		13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	COPB1	P53618	953 aa	Known RBP	13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	RHOA	P61586	193 aa		13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	SQSTM1	Q13501	440 aa		13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	INO80D	Q53TQ3	878 aa	Predicted RBP	13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	FKBP15	Q5T1M5	1219 aa		13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	FAM102A	Q5T9C2	384 aa	Predicted RBP	13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	MANEAL	Q5VSG8	457 aa		13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	CAPRIN2	Q6IMN6	1127 aa	Known RBP	13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	RWDD4	Q6NW29	188 aa	Known RBP	13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	GJB7	Q6PEY0	223 aa		13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	TRIM65	Q6PJ69	517 aa		13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	FAM129C	Q86XR2	697 aa		13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	GALNT11	Q8NCW6	608 aa		13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	SSC4D	Q8WTU2	575 aa		13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	ZDHHC1	Q8WTX9	485 aa		13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	NCAPG	Q9BPX3	1015 aa		13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	SPRY4	Q9C004	299 aa		13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	NDST4	Q9H3R1	872 aa		13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	SPATS2L	Q9NUQ6	558 aa	Known RBP	13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	TMEM248	Q9NWD8	314 aa		13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	VPS4A	Q9UN37	437 aa		13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	DAAM1	Q9Y4D1	1078 aa		13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	KCTD3	Q9Y597	815 aa		13.21	□□□□□ -0.29
SNHG17-208	ENST00000456953	CFAP69	A5D8W1	941 aa		13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	EFCAB7	A8K855	629 aa		13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	MKRN2OS	H3BPM6	223 aa		13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	PDE2A	O00408	941 aa	Predicted RBP	13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	FGF1	P05230	155 aa		13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	CCNB1	P14635	433 aa		13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	TRIM23	P36406	574 aa		13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	GABRB2	P47870	512 aa		13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	UQCRFS1	P47985	274 aa		13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	FANCC	Q00597	558 aa		13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	ABHD18	Q0P651	414 aa		13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	BIRC2	Q13490	618 aa		13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	GRM3	Q14832	879 aa		13.2	□□□□□ -0.3
SNHG17-208	ENST00000456953	ANKS6	Q68DC2	871 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms