RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 RNF10Q8N5U6 811 aaKnown RBP23.24■■□□□ 1.31
CBX3-204ENST00000456948 SLC13A1Q9BZW2 595 aa23.24■■□□□ 1.31
CBX3-204ENST00000456948 PCDH9Q9HC56 1237 aa23.24■■□□□ 1.31
CBX3-204ENST00000456948 MIF4GDA9UHW6 222 aaKnown RBP23.23■■□□□ 1.31
CBX3-204ENST00000456948 HACD1B0YJ81 288 aa23.23■■□□□ 1.31
CBX3-204ENST00000456948 CACNB4O00305 520 aaPredicted RBP23.23■■□□□ 1.31
CBX3-204ENST00000456948 ARHGAP6O43182 974 aa23.23■■□□□ 1.31
CBX3-204ENST00000456948 PIAS2O75928 621 aa23.23■■□□□ 1.31
CBX3-204ENST00000456948 HEXIM1O94992 359 aaKnown RBP23.23■■□□□ 1.31
CBX3-204ENST00000456948 PCCBP05166 539 aa23.23■■□□□ 1.31
CBX3-204ENST00000456948 C1SP09871 688 aa23.23■■□□□ 1.31
CBX3-204ENST00000456948 ZNF30P17039 623 aa23.23■■□□□ 1.31
CBX3-204ENST00000456948 FAXCQ5TGI0 409 aa23.23■■□□□ 1.31
CBX3-204ENST00000456948 ARRDC2Q8TBH0 407 aa23.23■■□□□ 1.31
CBX3-204ENST00000456948 LRRN4Q8WUT4 740 aa23.23■■□□□ 1.31
CBX3-204ENST00000456948 PIH1D2Q8WWB5 315 aa23.23■■□□□ 1.31
CBX3-204ENST00000456948 KRT35Q92764 455 aa23.23■■□□□ 1.31
CBX3-204ENST00000456948 NSMCE3Q96MG7 304 aa23.23■■□□□ 1.31
CBX3-204ENST00000456948 AGAP3Q96P47 875 aa23.23■■□□□ 1.31
CBX3-204ENST00000456948 VAT1Q99536 393 aa23.23■■□□□ 1.31
CBX3-204ENST00000456948 DESI2Q9BSY9 194 aa23.23■■□□□ 1.31
CBX3-204ENST00000456948 APOOQ9BUR5 198 aa23.23■■□□□ 1.31
CBX3-204ENST00000456948 TDRD1Q9BXT4 1180 aaKnown RBP23.23■■□□□ 1.31
CBX3-204ENST00000456948 SPASTQ9UBP0 616 aa23.23■■□□□ 1.31
CBX3-204ENST00000456948 CSNK1G3Q9Y6M4 447 aa23.23■■□□□ 1.31
CBX3-204ENST00000456948 TDRD6O60522 2096 aaKnown RBP23.23■■□□□ 1.31
CBX3-204ENST00000456948 A0A0J9YYE9 177 aa23.22■■□□□ 1.31
CBX3-204ENST00000456948 GOLGA8CPA6NN73 597 aa23.22■■□□□ 1.31
CBX3-204ENST00000456948 ENC1O14682 589 aa23.22■■□□□ 1.31
CBX3-204ENST00000456948 KRT86O43790 486 aa23.22■■□□□ 1.31
CBX3-204ENST00000456948 FZD6O60353 706 aa23.22■■□□□ 1.31
CBX3-204ENST00000456948 ZNF189O75820 626 aaPredicted RBP23.22■■□□□ 1.31
CBX3-204ENST00000456948 TJP3O95049 919 aa23.22■■□□□ 1.31
CBX3-204ENST00000456948 TRBC1P01850 177 aa23.22■■□□□ 1.31
CBX3-204ENST00000456948 CD86P42081 329 aa23.22■■□□□ 1.31
CBX3-204ENST00000456948 PPARDQ03181 441 aa23.22■■□□□ 1.31
CBX3-204ENST00000456948 ZNF211Q13398 564 aaPredicted RBP23.22■■□□□ 1.31
CBX3-204ENST00000456948 LLGL1Q15334 1064 aa23.22■■□□□ 1.31
CBX3-204ENST00000456948 TEX44Q53QW1 395 aa23.22■■□□□ 1.31
CBX3-204ENST00000456948 ZNF542PQ5EBM4 170 aa23.22■■□□□ 1.31
CBX3-204ENST00000456948 DENND2CQ68D51 928 aa23.22■■□□□ 1.31
CBX3-204ENST00000456948 ADAMTS14Q8WXS8 1223 aa23.22■■□□□ 1.31
CBX3-204ENST00000456948 NUS1Q96E22 293 aa23.22■■□□□ 1.31
CBX3-204ENST00000456948 MCCC1Q96RQ3 725 aaPredicted RBP23.22■■□□□ 1.31
CBX3-204ENST00000456948 HEMGNQ9BXL5 484 aa23.22■■□□□ 1.31
CBX3-204ENST00000456948 SLC25A51Q9H1U9 297 aa23.22■■□□□ 1.31
CBX3-204ENST00000456948 CHKBQ9Y259 395 aa23.22■■□□□ 1.31
CBX3-204ENST00000456948 GRID2IPA4D2P6 1211 aa23.21■■□□□ 1.31
CBX3-204ENST00000456948 APOC4-APOC2K7ER74 178 aa23.21■■□□□ 1.31
CBX3-204ENST00000456948 SCAMP1O15126 338 aa23.21■■□□□ 1.31
CBX3-204ENST00000456948 APOC2P02655 101 aa23.21■■□□□ 1.31
CBX3-204ENST00000456948 CTPS1P17812 591 aa23.21■■□□□ 1.31
CBX3-204ENST00000456948 SPINK2P20155 84 aa23.21■■□□□ 1.31
CBX3-204ENST00000456948 MARCKSL1P49006 195 aa23.21■■□□□ 1.31
CBX3-204ENST00000456948 ZBTB17Q13105 803 aa23.21■■□□□ 1.31
CBX3-204ENST00000456948 XRCC4Q13426 336 aa23.21■■□□□ 1.31
CBX3-204ENST00000456948 NFATC4Q14934 902 aa23.21■■□□□ 1.31
CBX3-204ENST00000456948 CNGA3Q16281 694 aa23.21■■□□□ 1.31
CBX3-204ENST00000456948 BBS12Q6ZW61 710 aa23.21■■□□□ 1.31
CBX3-204ENST00000456948 ZC3H18Q86VM9 953 aaKnown RBP23.21■■□□□ 1.31
CBX3-204ENST00000456948 RAVER1Q8IY67 606 aaKnown RBP23.21■■□□□ 1.31
CBX3-204ENST00000456948 SLC25A45Q8N413 288 aa23.21■■□□□ 1.31
CBX3-204ENST00000456948 TBATAQ96M53 351 aa23.21■■□□□ 1.31
CBX3-204ENST00000456948 OSBPL8Q9BZF1 889 aa23.21■■□□□ 1.31
CBX3-204ENST00000456948 NLGN3Q9NZ94 848 aa23.21■■□□□ 1.31
CBX3-204ENST00000456948 NCKIPSDQ9NZQ3 722 aa23.21■■□□□ 1.31
CBX3-204ENST00000456948 SAE1Q9UBE0 346 aaPredicted RBP23.21■■□□□ 1.31
CBX3-204ENST00000456948 PCDHGA1Q9Y5H4 931 aa23.21■■□□□ 1.31
CBX3-204ENST00000456948 TPRP12270 2363 aaKnown RBP23.21■■□□□ 1.31
CBX3-204ENST00000456948 GOLGA6L9A6NEM1 432 aa23.2■■□□□ 1.3
CBX3-204ENST00000456948 TOP3BO95985 862 aaKnown RBP23.2■■□□□ 1.3
CBX3-204ENST00000456948 PYGLP06737 847 aa23.2■■□□□ 1.3
CBX3-204ENST00000456948 PDHA1P08559 390 aa23.2■■□□□ 1.3
CBX3-204ENST00000456948 HOXC4P09017 264 aaPredicted RBP23.2■■□□□ 1.3
CBX3-204ENST00000456948 ATXN1LP0C7T5 689 aaKnown RBP23.2■■□□□ 1.3
CBX3-204ENST00000456948 CTSEP14091 401 aa23.2■■□□□ 1.3
CBX3-204ENST00000456948 HNF1BP35680 557 aa23.2■■□□□ 1.3
CBX3-204ENST00000456948 NIPAL4Q0D2K0 466 aa23.2■■□□□ 1.3
CBX3-204ENST00000456948 PRKD1Q15139 912 aaPredicted RBP23.2■■□□□ 1.3
CBX3-204ENST00000456948 SLC14A2Q15849 920 aa23.2■■□□□ 1.3
CBX3-204ENST00000456948 ESRP1Q6NXG1 681 aaKnown RBP23.2■■□□□ 1.3
CBX3-204ENST00000456948 ENPP7Q6UWV6 458 aa23.2■■□□□ 1.3
CBX3-204ENST00000456948 KANSL1Q7Z3B3 1105 aa23.2■■□□□ 1.3
CBX3-204ENST00000456948 CNTD1Q8N815 330 aa23.2■■□□□ 1.3
CBX3-204ENST00000456948 LRRC57Q8N9N7 239 aa23.2■■□□□ 1.3
CBX3-204ENST00000456948 OR4C6Q8NH72 309 aa23.2■■□□□ 1.3
CBX3-204ENST00000456948 CCHCR1Q8TD31 782 aa23.2■■□□□ 1.3
CBX3-204ENST00000456948 SCG3Q8WXD2 468 aaKnown RBP23.2■■□□□ 1.3
CBX3-204ENST00000456948 HAUS1Q96CS2 278 aa23.2■■□□□ 1.3
CBX3-204ENST00000456948 TEKT5Q96M29 485 aa23.2■■□□□ 1.3
CBX3-204ENST00000456948 COQ10AQ96MF6 247 aa23.2■■□□□ 1.3
CBX3-204ENST00000456948 WDR92Q96MX6 357 aa23.2■■□□□ 1.3
CBX3-204ENST00000456948 MLPHQ9BV36 600 aaPredicted RBP23.2■■□□□ 1.3
CBX3-204ENST00000456948 APOBEC3BQ9UH17 382 aaKnown RBP23.2■■□□□ 1.3
CBX3-204ENST00000456948 LRRK1Q38SD2 2015 aa23.2■■□□□ 1.3
CBX3-204ENST00000456948 NPIPB15A6NHN6 443 aaPredicted RBP23.19■■□□□ 1.3
CBX3-204ENST00000456948 ANKRD66B4E2M5 251 aa23.19■■□□□ 1.3
CBX3-204ENST00000456948 FFAR2O15552 330 aa23.19■■□□□ 1.3
CBX3-204ENST00000456948 AQP9O43315 295 aa23.19■■□□□ 1.3
CBX3-204ENST00000456948 RASGRP1O95267 797 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms