RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 TRA2AQ13595 282 aaKnown RBP eCLIP23.3■■□□□ 1.32
PTPRA-208ENST00000455631 NR1D2Q14995 579 aa23.3■■□□□ 1.32
PTPRA-208ENST00000455631 CYTH1Q15438 398 aa23.3■■□□□ 1.32
PTPRA-208ENST00000455631 CCDC14Q49A88 953 aa23.3■■□□□ 1.32
PTPRA-208ENST00000455631 NAA35Q5VZE5 725 aa23.3■■□□□ 1.32
PTPRA-208ENST00000455631 PHLDB2Q86SQ0 1253 aa23.3■■□□□ 1.32
PTPRA-208ENST00000455631 FAM129CQ86XR2 697 aa23.3■■□□□ 1.32
PTPRA-208ENST00000455631 RTL3Q8N8U3 475 aaKnown RBP23.3■■□□□ 1.32
PTPRA-208ENST00000455631 RXFP2Q8WXD0 754 aa23.3■■□□□ 1.32
PTPRA-208ENST00000455631 ZNF641Q96N77 438 aaPredicted RBP23.3■■□□□ 1.32
PTPRA-208ENST00000455631 ZMYND15Q9H091 742 aa23.3■■□□□ 1.32
PTPRA-208ENST00000455631 GPN2Q9H9Y4 310 aaPredicted RBP23.3■■□□□ 1.32
PTPRA-208ENST00000455631 CARS2Q9HA77 564 aaKnown RBP23.3■■□□□ 1.32
PTPRA-208ENST00000455631 USP9YO00507 2555 aaPredicted RBP23.3■■□□□ 1.32
PTPRA-208ENST00000455631 RASA4BC9J798 803 aa23.29■■□□□ 1.32
PTPRA-208ENST00000455631 CAPN5O15484 640 aaPredicted RBP23.29■■□□□ 1.32
PTPRA-208ENST00000455631 TEX33O43247 280 aa23.29■■□□□ 1.32
PTPRA-208ENST00000455631 RASA4O43374 803 aa23.29■■□□□ 1.32
PTPRA-208ENST00000455631 DUX1O43812 170 aa23.29■■□□□ 1.32
PTPRA-208ENST00000455631 ECEL1O95672 775 aa23.29■■□□□ 1.32
PTPRA-208ENST00000455631 ELFN1P0C7U0 828 aa23.29■■□□□ 1.32
PTPRA-208ENST00000455631 CCNB1P14635 433 aa23.29■■□□□ 1.32
PTPRA-208ENST00000455631 MPSTP25325 297 aa23.29■■□□□ 1.32
PTPRA-208ENST00000455631 EPHB2P29323 1055 aa23.29■■□□□ 1.32
PTPRA-208ENST00000455631 STAT1P42224 750 aa23.29■■□□□ 1.32
PTPRA-208ENST00000455631 CDC20Q12834 499 aa23.29■■□□□ 1.32
PTPRA-208ENST00000455631 RALGDSQ12967 914 aa23.29■■□□□ 1.32
PTPRA-208ENST00000455631 NKAIN2Q5VXU1 208 aa23.29■■□□□ 1.32
PTPRA-208ENST00000455631 C17orf82Q86X59 251 aaPredicted RBP23.29■■□□□ 1.32
PTPRA-208ENST00000455631 CAMK1DQ8IU85 385 aa23.29■■□□□ 1.32
PTPRA-208ENST00000455631 NRSN1Q8IZ57 195 aa23.29■■□□□ 1.32
PTPRA-208ENST00000455631 OR4D9Q8NGE8 314 aa23.29■■□□□ 1.32
PTPRA-208ENST00000455631 GPT2Q8TD30 523 aa23.29■■□□□ 1.32
PTPRA-208ENST00000455631 SLC45A3Q96JT2 553 aa23.29■■□□□ 1.32
PTPRA-208ENST00000455631 GSDMCQ9BYG8 508 aa23.29■■□□□ 1.32
PTPRA-208ENST00000455631 ASPSCR1Q9BZE9 553 aa23.29■■□□□ 1.32
PTPRA-208ENST00000455631 UBA2Q9UBT2 640 aaPredicted RBP23.29■■□□□ 1.32
PTPRA-208ENST00000455631 BUB1BO60566 1050 aaPredicted RBP23.28■■□□□ 1.32
PTPRA-208ENST00000455631 FGF1P05230 155 aa23.28■■□□□ 1.32
PTPRA-208ENST00000455631 HOXC4P09017 264 aaPredicted RBP23.28■■□□□ 1.32
PTPRA-208ENST00000455631 THRAP10827 490 aa23.28■■□□□ 1.32
PTPRA-208ENST00000455631 MTIF2P46199 727 aaKnown RBP23.28■■□□□ 1.32
PTPRA-208ENST00000455631 NOMO3P69849 1222 aa23.28■■□□□ 1.32
PTPRA-208ENST00000455631 ILF3Q12906 894 aaKnown RBP eCLIP23.28■■□□□ 1.323e-10■■■□□ 15.1
PTPRA-208ENST00000455631 LACTB2Q53H82 288 aaPredicted RBP23.28■■□□□ 1.32
PTPRA-208ENST00000455631 DCAF12Q5T6F0 453 aa23.28■■□□□ 1.32
PTPRA-208ENST00000455631 HIST2H2BCQ6DN03 193 aa23.28■■□□□ 1.32
PTPRA-208ENST00000455631 NOP9Q86U38 636 aaKnown RBP23.28■■□□□ 1.32
PTPRA-208ENST00000455631 PAF1Q8N7H5 531 aa23.28■■□□□ 1.32
PTPRA-208ENST00000455631 KIAA1143Q96AT1 154 aaPredicted RBP23.28■■□□□ 1.32
PTPRA-208ENST00000455631 ABHD17AQ96GS6 310 aa23.28■■□□□ 1.32
PTPRA-208ENST00000455631 OCIAD1Q9NX40 245 aa23.28■■□□□ 1.32
PTPRA-208ENST00000455631 TAAR2Q9P1P5 351 aa23.28■■□□□ 1.32
PTPRA-208ENST00000455631 CFAP69A5D8W1 941 aa23.27■■□□□ 1.32
PTPRA-208ENST00000455631 EFCAB7A8K855 629 aa23.27■■□□□ 1.32
PTPRA-208ENST00000455631 MMEP08473 750 aa23.27■■□□□ 1.32
PTPRA-208ENST00000455631 CSF2RBP32927 897 aa23.27■■□□□ 1.32
PTPRA-208ENST00000455631 TRIM23P36406 574 aa23.27■■□□□ 1.32
PTPRA-208ENST00000455631 YBEYP58557 167 aaPredicted RBP23.27■■□□□ 1.32
PTPRA-208ENST00000455631 PARP15Q460N3 678 aa23.27■■□□□ 1.32
PTPRA-208ENST00000455631 ANKS6Q68DC2 871 aa23.27■■□□□ 1.32
PTPRA-208ENST00000455631 LIPIQ6XZB0 460 aa23.27■■□□□ 1.32
PTPRA-208ENST00000455631 STRADAQ7RTN6 431 aa23.27■■□□□ 1.32
PTPRA-208ENST00000455631 ATCAYQ86WG3 371 aa23.27■■□□□ 1.32
PTPRA-208ENST00000455631 NRROSQ86YC3 692 aa23.27■■□□□ 1.32
PTPRA-208ENST00000455631 PYROXD2Q8N2H3 581 aa23.27■■□□□ 1.32
PTPRA-208ENST00000455631 JOSD2Q8TAC2 188 aa23.27■■□□□ 1.32
PTPRA-208ENST00000455631 FAM172AQ8WUF8 416 aa23.27■■□□□ 1.32
PTPRA-208ENST00000455631 PATE1Q8WXA2 126 aa23.27■■□□□ 1.32
PTPRA-208ENST00000455631 MIB2Q96AX9 1013 aa23.27■■□□□ 1.32
PTPRA-208ENST00000455631 TUBGCP5Q96RT8 1024 aa23.27■■□□□ 1.32
PTPRA-208ENST00000455631 TMEM9Q9P0T7 183 aa23.27■■□□□ 1.32
PTPRA-208ENST00000455631 RWDD2AQ9UIY3 292 aa23.27■■□□□ 1.32
PTPRA-208ENST00000455631 SPTAN1Q13813 2472 aaKnown RBP23.27■■□□□ 1.32
PTPRA-208ENST00000455631 PDE2AO00408 941 aaPredicted RBP23.26■■□□□ 1.31
PTPRA-208ENST00000455631 MYCLP1P12525 358 aaPredicted RBP23.26■■□□□ 1.31
PTPRA-208ENST00000455631 AK4P27144 223 aaPredicted RBP23.26■■□□□ 1.31
PTPRA-208ENST00000455631 GPR3P46089 330 aa23.26■■□□□ 1.31
PTPRA-208ENST00000455631 HDAC4P56524 1084 aa23.26■■□□□ 1.31
PTPRA-208ENST00000455631 RAB15P59190 212 aa23.26■■□□□ 1.31
PTPRA-208ENST00000455631 PNCKQ6P2M8 343 aa23.26■■□□□ 1.31
PTPRA-208ENST00000455631 SLC30A9Q6PML9 568 aa23.26■■□□□ 1.31
PTPRA-208ENST00000455631 NLGN4XQ8N0W4 816 aa23.26■■□□□ 1.31
PTPRA-208ENST00000455631 PELI3Q8N2H9 469 aa23.26■■□□□ 1.31
PTPRA-208ENST00000455631 NLGN4YQ8NFZ3 816 aaPredicted RBP23.26■■□□□ 1.31
PTPRA-208ENST00000455631 APOBEC4Q8WW27 367 aaKnown RBP23.26■■□□□ 1.31
PTPRA-208ENST00000455631 PILRAQ9UKJ1 303 aa23.26■■□□□ 1.31
PTPRA-208ENST00000455631 FHOD1Q9Y613 1164 aa23.26■■□□□ 1.31
PTPRA-208ENST00000455631 NBPF19A0A087WUL8 3843 aa23.26■■□□□ 1.31
PTPRA-208ENST00000455631 PRR19A6NJB7 356 aa23.25■■□□□ 1.31
PTPRA-208ENST00000455631 C2CD4BA6NLJ0 364 aa23.25■■□□□ 1.31
PTPRA-208ENST00000455631 B4E171 279 aa23.25■■□□□ 1.31
PTPRA-208ENST00000455631 MTSS1O43312 755 aa23.25■■□□□ 1.31
PTPRA-208ENST00000455631 SERPINA4P29622 427 aa23.25■■□□□ 1.31
PTPRA-208ENST00000455631 OAS2P29728 719 aaKnown RBP23.25■■□□□ 1.31
PTPRA-208ENST00000455631 TSPAN7P41732 249 aa23.25■■□□□ 1.31
PTPRA-208ENST00000455631 PTPN9P43378 593 aa23.25■■□□□ 1.31
PTPRA-208ENST00000455631 GNPDA1P46926 289 aa23.25■■□□□ 1.31
PTPRA-208ENST00000455631 PPM1FP49593 454 aaPredicted RBP23.25■■□□□ 1.31
PTPRA-208ENST00000455631 SEPT6Q14141 434 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms