RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 RWDD4Q6NW29 188 aaKnown RBP4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 C22orf39Q6P5X5 142 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 VHLLQ6RSH7 139 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 BEND4Q6ZU67 534 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 ERN2Q76MJ5 926 aaKnown RBP4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 BNIPLQ7Z465 357 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 SETD3Q86TU7 594 aaPredicted RBP4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 HORMAD1Q86X24 394 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 ZDHHC17Q8IUH5 632 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 FAM114A1Q8IWE2 563 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 SHISA5Q8N114 240 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 SLC22A18ASQ8N1D0 253 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 PYROXD2Q8N2H3 581 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 RYBPQ8N488 228 aaPredicted RBP4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 C19orf47Q8N9M1 422 aaKnown RBP4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 TMEM145Q8NBT3 493 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 JOSD2Q8TAC2 188 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 RXFP2Q8WXD0 754 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 TP53INP1Q96A56 240 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 PGAP3Q96FM1 320 aaPredicted RBP4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 NAF1Q96HR8 494 aaKnown RBP4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 MRFAP1L1Q96HT8 127 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 CCDC74BQ96LY2 380 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 HAPLN3Q96S86 360 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 PCDHB18PQ96TA0 734 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 HEPHQ9BQS7 1158 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 C11orf70Q9BRQ4 267 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 CALN1Q9BXU9 219 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 SLC17A9Q9BYT1 436 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 STK33Q9BYT3 514 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 TM6SF2Q9BZW4 377 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 ZYG11BQ9C0D3 744 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 ZDHHC6Q9H6R6 413 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 ATP13A1Q9HD20 1204 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 DYRK4Q9NR20 520 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 FAM207AQ9NSI2 230 aaPredicted RBP4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 DNAJC28Q9NX36 388 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 CHMP5Q9NZZ3 219 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 SIRPGQ9P1W8 387 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 HECAQ9UBI9 543 aaPredicted RBP4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 ZNF212Q9UDV6 495 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 OR12D3Q9UGF7 316 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 PFDN2Q9UHV9 154 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 DMTF1Q9Y222 760 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 PCDHGA1Q9Y5H4 931 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 FADS3Q9Y5Q0 445 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 ATRXP46100 2492 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 CHD6Q8TD26 2715 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 LY6G6EA0A0G2JKS1 128 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 ILVBLA1L0T0 632 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 HMX2A2RU54 273 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 C16orf96A6NNT2 1141 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 F8VZ95 297 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 KRIT1O00522 736 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 RGS13O14921 159 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 SCAMP1O15126 338 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 YKT6O15498 198 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 INSIG1O15503 277 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 BUB1O43683 1085 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 PIAS2O75928 621 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 SLITRK5O94991 958 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 MT-CO3P00414 261 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 PRNPP04156 253 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 CYP1A1P04798 512 aaPredicted RBP4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 MPOP05164 745 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 PLEKP08567 350 aaPredicted RBP4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 ADRB3P13945 408 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 HNRNPA2B1P22626 353 aaKnown RBP4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 ACP1P24666 158 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 AKT2P31751 481 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 L1CAMP32004 1257 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 RFC1P35251 1148 aaPredicted RBP4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 HNF1BP35680 557 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 GATA4P43694 442 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 SERPINH1P50454 418 aaKnown RBP4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 CCNHP51946 323 aaPredicted RBP4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 NOMO3P69849 1222 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 FMO1Q01740 532 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 SLC20A2Q08357 652 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 CCDC15Q0P6D6 951 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 CCDC173Q0VFZ6 552 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 OVGP1Q12889 678 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 MTA1Q13330 715 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 C1orf61Q13536 156 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 FZD2Q14332 565 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 KRT31Q15323 416 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 TCEA2Q15560 299 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 ATXN7L2Q5T6C5 722 aaPredicted RBP4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 RETSATQ6NUM9 610 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 LETMD1Q6P1Q0 360 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 NEK5Q6P3R8 708 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 SCYL2Q6P3W7 929 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 WDR59Q6PJI9 974 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 CRTC1Q6UUV9 634 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 GCNT7Q6ZNI0 430 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 PTAR1Q7Z6K3 402 aaPredicted RBP4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 TTC7BQ86TV6 843 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 IQCHQ86VS3 1027 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 JAZF1Q86VZ6 243 aa4.76□□□□□ -1.65
GTF3C3-208ENST00000455546 ZNF354CQ86Y25 554 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms