RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 UNGP13051 313 aaPredicted RBP8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 RFC1P35251 1148 aaPredicted RBP8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 RENBPP51606 427 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 ZNF135P52742 658 aaPredicted RBP8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 JAM2P57087 298 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 TPI1P60174 286 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 POLR2FP61218 127 aaKnown RBP8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 NSUN2Q08J23 767 aaKnown RBP eCLIP8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 BIRC2Q13490 618 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 MAP9Q49MG5 647 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 PHF19Q5T6S3 580 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 TMCO4Q5TGY1 634 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 DNAJC24Q6P3W2 148 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 SCYL2Q6P3W7 929 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 DCUN1D2Q6PH85 259 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 SPRED1Q7Z699 444 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 PIM3Q86V86 326 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 Q8N9G6 341 aaPredicted RBP8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 ANKRD20A12PQ8NF67 263 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 JOSD2Q8TAC2 188 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 SLC30A5Q8TAD4 765 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 GPBAR1Q8TDU6 330 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 SLC20A1Q8WUM9 679 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 VOPP1Q96AW1 172 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 PDXPQ96GD0 296 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 DPYSL5Q9BPU6 564 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 CNPY3Q9BT09 278 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 GSDMCQ9BYG8 508 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 GANQ9H2C0 597 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 ADNPQ9H2P0 1102 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 DPEP2Q9H4A9 486 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 CLSTN2Q9H4D0 955 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 NOL6Q9H6R4 1146 aaKnown RBP8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 WDR26Q9H7D7 661 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 LRIT1Q9P2V4 623 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 SEPT3Q9UH03 358 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 IL17BQ9UHF5 180 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 FZD10Q9ULW2 581 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 COQ6Q9Y2Z9 468 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 PRAMEF33A0A0G2JMD5 474 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 RHPN2P1A8MT19 583 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 B4DGG1 531 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 STMND1H3BQB6 276 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 INSIG1O15503 277 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 PRAMEF10O60809 474 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 PALMO75781 387 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 RECQL5O94762 991 aaPredicted RBP8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 MYCLP1P12525 358 aaPredicted RBP8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 HGFP14210 728 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 CHRNB2P17787 502 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 ITIH2P19823 946 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 TRIM23P36406 574 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 GPR3P46089 330 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 AP1S1P61966 158 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 BCL2L1Q07817 233 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 ILF3Q12906 894 aaKnown RBP eCLIP8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 TRA2AQ13595 282 aaKnown RBP eCLIP8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 HLTFQ14527 1009 aaKnown RBP eCLIP8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 CYTH1Q15438 398 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 CLEC16AQ2KHT3 1053 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 DPCR1Q3MIW9 517 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 LINC00303Q3SY05 128 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 HSP90AA4PQ58FG1 418 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 AFMIDQ63HM1 303 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 SPECC1LQ69YQ0 1117 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 WDR59Q6PJI9 974 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 DPPA4Q7L190 304 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 PHLDB2Q86SQ0 1253 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 SRLQ86TD4 932 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 SLITRK4Q8IW52 837 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 EXD3Q8N9H8 876 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 OR1E3Q8WZA6 343 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 EXTL1Q92935 676 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 USP7Q93009 1102 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 FUBP1Q96AE4 644 aaKnown RBP8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 EXOC2Q96KP1 924 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 CINPQ9BW66 212 aaPredicted RBP8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 LRRC19Q9H756 370 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 SP110Q9HB58 689 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 PDFQ9HBH1 243 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 PHPT1Q9NRX4 125 aaPredicted RBP8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 FAM207AQ9NSI2 230 aaPredicted RBP8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 SEPT11Q9NVA2 429 aaKnown RBP8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 RNF215Q9Y6U7 377 aa8.05□□□□□ -1.12
NIF3L1-209ENST00000454952 TLN1Q9Y490 2541 aaKnown RBP8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 MAST4O15021 2626 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 TENM4Q6N022 2769 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 FAM170AA1A519 330 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 PRSS38A1L453 326 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 CFAP99D6REC4 459 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 EEF2KO00418 725 aaKnown RBP8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 TERTO14746 1132 aaKnown RBP8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 CAPN5O15484 640 aaPredicted RBP8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 DAPK3O43293 454 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 CCP110O43303 1012 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 KRT10P13645 584 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 TEAD1P28347 426 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 MAN1A1P33908 653 aa8.04□□□□□ -1.12
NIF3L1-209ENST00000454952 HSPA9P38646 679 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms