RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 NOMO2Q5JPE7 1267 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 REP15Q6BDI9 236 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 FBXL22Q6P050 247 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 FBXL19Q6PCT2 694 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 TMEM207Q6UWW9 146 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 SLC24A5Q71RS6 500 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 SCN4BQ8IWT1 228 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 LILRA2Q8N149 483 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 BHLHE22Q8NFJ8 381 aaPredicted RBP12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 BRSK1Q8TDC3 778 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 TSPEARQ8WU66 669 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 ANKRD49Q8WVL7 239 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 HDAC10Q969S8 669 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 ERVK-6Q9BXR3 956 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 SLC2A11Q9BYW1 496 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 ATXN3LQ9H3M9 355 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 TFB2MQ9H5Q4 396 aaKnown RBP12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 PDFQ9HBH1 243 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 INTS10Q9NVR2 710 aaKnown RBP12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 POLR3BQ9NW08 1133 aaPredicted RBP12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 GMIPQ9P107 970 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 TMEM181Q9P2C4 612 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 EPS15L1Q9UBC2 864 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 TTC3P53804 2025 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 RAMP2O60895 175 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 RPP40O75818 363 aaKnown RBP12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 CNTN5O94779 1100 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 UPP2O95045 317 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 ZCCHC18P0CG32 403 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 SMIM18P0DKX4 95 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 HNRNPLP14866 589 aaKnown RBP eCLIP12.54□□□□□ -0.41e-9■□□□□ 8.8
ECHDC1-209ENST00000454591 CD1DP15813 335 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 YWHAQP27348 245 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 ZNF157P51786 506 aaPredicted RBP12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 PRAMEP78395 509 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 MRPS22P82650 360 aaKnown RBP12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 TLR1Q15399 786 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 KCNA10Q16322 511 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 PCSK7Q16549 785 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 CLLU1OSQ5K130 101 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 ZNF280DQ6N043 979 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 MRNIPQ6NTE8 343 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 TRAF7Q6Q0C0 670 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 GK5Q6ZS86 529 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 RTN4RL1Q86UN2 441 aaPredicted RBP12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 ALDH16A1Q8IZ83 802 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 CLYBLQ8N0X4 340 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 SPATA6LQ8N4H0 392 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 PCSK9Q8NBP7 692 aaKnown RBP12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 HIPK4Q8NE63 616 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 IGSF8Q969P0 613 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 PSMG2Q969U7 264 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 TRIB3Q96RU7 358 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 NDNQ99608 321 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 C1QTNF3Q9BXJ4 246 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 POLR1EQ9GZS1 481 aaKnown RBP12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 SUDS3Q9H7L9 328 aaPredicted RBP12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 TNFRSF12AQ9NP84 129 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 ACSS2Q9NR19 701 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 TLR8Q9NR97 1041 aaKnown RBP12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 TMEM45AQ9NWC5 275 aa12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 ABI2Q9NYB9 513 aaPredicted RBP12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 MARCH4Q9P2E8 410 aaPredicted RBP12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 UXTQ9UBK9 157 aaPredicted RBP12.54□□□□□ -0.4
ECHDC1-209ENST00000454591 C15orf38-AP3S2A0A0A6YYH1 394 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 CAPN8A6NHC0 703 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 F8W810 466 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 UBFD1O14562 309 aaKnown RBP12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 TBC1D4O60343 1298 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 NRP2O60462 931 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 VPS4BO75351 444 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 MATN4O95460 622 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 CRTAMO95727 393 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 GLP2RO95838 553 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 OR4Q2P0C623 313 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 GPX3P22352 226 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 PKNOX1P55347 436 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 FCGRTP55899 365 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 GRIK2Q13002 908 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 POLD3Q15054 466 aaPredicted RBP12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 SAMD4BQ5PRF9 694 aaKnown RBP12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 RGMBQ6NW40 437 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 PRMT9Q6P2P2 845 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 ZNF549Q6P9A3 640 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 ARPINQ7Z6K5 226 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 ZNF280BQ86YH2 543 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 C2orf15Q8WU43 125 aaKnown RBP12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 ZUFSPQ96AP4 578 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 SGF29Q96ES7 293 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 KLHL32Q96NJ5 620 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 ATOH8Q96SQ7 321 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 TCF12Q99081 682 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 NPAS2Q99743 824 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 DDX50Q9BQ39 737 aaKnown RBP12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 GPATCH1Q9BRR8 931 aaKnown RBP12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 AARSD1Q9BTE6 412 aaKnown RBP12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 TTLL2Q9BWV7 592 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 ELAC1Q9H777 363 aaKnown RBP12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 PIDD1Q9HB75 910 aa12.53□□□□□ -0.4
ECHDC1-209ENST00000454591 SLC24A3Q9HC58 644 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms