RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 FAM193AP78312 1265 aa14.21□□□□□ -0.13
HDAC4-205ENST00000454542 WSCD2Q2TBF2 565 aa14.21□□□□□ -0.13
HDAC4-205ENST00000454542 FAM182AQ5T1J6 154 aa14.21□□□□□ -0.13
HDAC4-205ENST00000454542 ESRP1Q6NXG1 681 aaKnown RBP14.21□□□□□ -0.13
HDAC4-205ENST00000454542 KDM7AQ6ZMT4 941 aa14.21□□□□□ -0.13
HDAC4-205ENST00000454542 DGLUCYQ7Z3D6 616 aa14.21□□□□□ -0.13
HDAC4-205ENST00000454542 CDKL3Q8IVW4 592 aaPredicted RBP14.21□□□□□ -0.13
HDAC4-205ENST00000454542 NAXDQ8IW45 347 aa14.21□□□□□ -0.13
HDAC4-205ENST00000454542 RAVER1Q8IY67 606 aaKnown RBP14.21□□□□□ -0.13
HDAC4-205ENST00000454542 ZNF567Q8N184 647 aa14.21□□□□□ -0.13
HDAC4-205ENST00000454542 TRIM58Q8NG06 486 aa14.21□□□□□ -0.13
HDAC4-205ENST00000454542 SAP25Q8TEE9 199 aa14.21□□□□□ -0.13
HDAC4-205ENST00000454542 DTD2Q96FN9 168 aa14.21□□□□□ -0.13
HDAC4-205ENST00000454542 CARD9Q9H257 536 aa14.21□□□□□ -0.13
HDAC4-205ENST00000454542 DNPEPQ9ULA0 475 aa14.21□□□□□ -0.13
HDAC4-205ENST00000454542 CHKBQ9Y259 395 aa14.21□□□□□ -0.13
HDAC4-205ENST00000454542 KNL1Q8NG31 2342 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 SPTY2D1-AS1A0A0U1RR47 76 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 KCNK3O14649 394 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 RECQL5O94762 991 aaPredicted RBP14.2□□□□□ -0.14
HDAC4-205ENST00000454542 KCNK5O95279 499 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 ALPIP09923 528 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 RBP3P10745 1247 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 ZNF30P17039 623 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 NFKB1P19838 968 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 RBL1P28749 1068 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 HNF1BP35680 557 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 EIF3EP60228 445 aaKnown RBP14.2□□□□□ -0.14
HDAC4-205ENST00000454542 YPEL5P62699 121 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 MTM1Q13496 603 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 FZD2Q14332 565 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 LRRC14Q15048 493 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 CDKN3Q16667 212 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 QPCTQ16769 361 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 KDELC1Q6UW63 502 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 Q6ZSR6 202 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 TSPAN33Q86UF1 283 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 KLHDC8BQ8IXV7 354 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 TTC13Q8NBP0 860 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 DEFB124Q8NES8 71 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 SLC35B2Q8TB61 432 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 SMIM14Q96QK8 99 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 FCRL5Q96RD9 977 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 RBM15Q96T37 977 aaKnown RBP eCLIP14.2□□□□□ -0.14
HDAC4-205ENST00000454542 GORASP1Q9BQQ3 440 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 TLR10Q9BXR5 811 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 GBA3Q9H227 469 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 KCTD5Q9NXV2 234 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 PCOLCE2Q9UKZ9 415 aa14.2□□□□□ -0.14
HDAC4-205ENST00000454542 TCRBV7S2A1N4TA0A589 114 aa14.19□□□□□ -0.14
HDAC4-205ENST00000454542 H7C0C1 242 aa14.19□□□□□ -0.14
HDAC4-205ENST00000454542 LZTS3O60299 673 aaPredicted RBP14.19□□□□□ -0.14
HDAC4-205ENST00000454542 MT-CYBP00156 380 aaPredicted RBP14.19□□□□□ -0.14
HDAC4-205ENST00000454542 C1SP09871 688 aa14.19□□□□□ -0.14
HDAC4-205ENST00000454542 CEACAM1P13688 526 aa14.19□□□□□ -0.14
HDAC4-205ENST00000454542 NME1P15531 152 aaKnown RBP14.19□□□□□ -0.14
HDAC4-205ENST00000454542 CTPS1P17812 591 aa14.19□□□□□ -0.14
HDAC4-205ENST00000454542 TEAD1P28347 426 aa14.19□□□□□ -0.14
HDAC4-205ENST00000454542 ATP5OP48047 213 aa14.19□□□□□ -0.14
HDAC4-205ENST00000454542 ARRB1P49407 418 aaPredicted RBP14.19□□□□□ -0.14
HDAC4-205ENST00000454542 STC1P52823 247 aa14.19□□□□□ -0.14
HDAC4-205ENST00000454542 PTPRRQ15256 657 aa14.19□□□□□ -0.14
HDAC4-205ENST00000454542 PPM1JQ5JR12 505 aa14.19□□□□□ -0.14
HDAC4-205ENST00000454542 SEL1L2Q5TEA6 688 aa14.19□□□□□ -0.14
HDAC4-205ENST00000454542 CCDC181Q5TID7 509 aa14.19□□□□□ -0.14
HDAC4-205ENST00000454542 LRRC66Q68CR7 880 aa14.19□□□□□ -0.14
HDAC4-205ENST00000454542 MACC1Q6ZN28 852 aa14.19□□□□□ -0.14
HDAC4-205ENST00000454542 TECPR1Q7Z6L1 1165 aa14.19□□□□□ -0.14
HDAC4-205ENST00000454542 PARGQ86W56 976 aa14.19□□□□□ -0.14
HDAC4-205ENST00000454542 REXO1L1PQ8IX06 675 aa14.19□□□□□ -0.14
HDAC4-205ENST00000454542 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.19□□□□□ -0.14
HDAC4-205ENST00000454542 PAF1Q8N7H5 531 aa14.19□□□□□ -0.14
HDAC4-205ENST00000454542 LPCAT1Q8NF37 534 aa14.19□□□□□ -0.14
HDAC4-205ENST00000454542 SPATA22Q8NHS9 363 aa14.19□□□□□ -0.14
HDAC4-205ENST00000454542 OXNAD1Q96HP4 312 aaPredicted RBP14.19□□□□□ -0.14
HDAC4-205ENST00000454542 USP29Q9HBJ7 922 aa14.19□□□□□ -0.14
HDAC4-205ENST00000454542 KLHL8Q9P2G9 620 aaPredicted RBP14.19□□□□□ -0.14
HDAC4-205ENST00000454542 TRHDEQ9UKU6 1024 aa14.19□□□□□ -0.14
HDAC4-205ENST00000454542 R3HDM2Q9Y2K5 976 aaKnown RBP14.19□□□□□ -0.14
HDAC4-205ENST00000454542 CABIN1Q9Y6J0 2220 aa14.19□□□□□ -0.14
HDAC4-205ENST00000454542 GOLGA6L9A6NEM1 432 aa14.18□□□□□ -0.14
HDAC4-205ENST00000454542 ANKRD66B4E2M5 251 aa14.18□□□□□ -0.14
HDAC4-205ENST00000454542 SH3BP5O60239 455 aa14.18□□□□□ -0.14
HDAC4-205ENST00000454542 CSF2P04141 144 aa14.18□□□□□ -0.14
HDAC4-205ENST00000454542 HOXC4P09017 264 aaPredicted RBP14.18□□□□□ -0.14
HDAC4-205ENST00000454542 ATXN1LP0C7T5 689 aaKnown RBP14.18□□□□□ -0.14
HDAC4-205ENST00000454542 GRK6P43250 576 aa14.18□□□□□ -0.14
HDAC4-205ENST00000454542 NOVA1P51513 510 aaKnown RBP14.18□□□□□ -0.14
HDAC4-205ENST00000454542 KIAA1024LP59773 190 aa14.18□□□□□ -0.14
HDAC4-205ENST00000454542 IL9RQ01113 521 aa14.18□□□□□ -0.14
HDAC4-205ENST00000454542 CDK18Q07002 472 aa14.18□□□□□ -0.14
HDAC4-205ENST00000454542 EIF2B5Q13144 721 aaKnown RBP14.18□□□□□ -0.14
HDAC4-205ENST00000454542 PDE1CQ14123 709 aaPredicted RBP14.18□□□□□ -0.14
HDAC4-205ENST00000454542 RPS6KA1Q15418 735 aa14.18□□□□□ -0.14
HDAC4-205ENST00000454542 SIX1Q15475 284 aaPredicted RBP14.18□□□□□ -0.14
HDAC4-205ENST00000454542 PSAPL1Q6NUJ1 521 aa14.18□□□□□ -0.14
HDAC4-205ENST00000454542 CRTC1Q6UUV9 634 aa14.18□□□□□ -0.14
HDAC4-205ENST00000454542 ZNF765Q7L2R6 523 aa14.18□□□□□ -0.14
HDAC4-205ENST00000454542 HSD11B1LQ7Z5J1 315 aa14.18□□□□□ -0.14
HDAC4-205ENST00000454542 GLRX5Q86SX6 157 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms