RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 LRRK1Q38SD2 2015 aa10.72□□□□□ -0.69
DDX39A-203ENST00000454233 LY6G6EA0A0G2JKS1 128 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 PDE2AO00408 941 aaPredicted RBP10.71□□□□□ -0.69
DDX39A-203ENST00000454233 GCATO75600 419 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 MTA2O94776 668 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 PGLSO95336 258 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 MAP3K6O95382 1288 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 TNFP01375 233 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 MYF5P13349 255 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 TSHRP16473 764 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 CA4P22748 312 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 EPHB1P54762 984 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 KIAA1024LP59773 190 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 ARHGEF7Q14155 803 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 CDKN3Q16667 212 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 C6orf132Q5T0Z8 1188 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 DENND2CQ68D51 928 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 LVRNQ6Q4G3 990 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 SARM1Q6SZW1 724 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 GKN2Q86XP6 184 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 SDR16C5Q8N3Y7 309 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 DCBLD1Q8N8Z6 715 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 PLA2G15Q8NCC3 412 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 CCNYQ8ND76 341 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 OR56A4Q8NGH8 313 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 MAPK15Q8TD08 544 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 RAPGEF5Q92565 580 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 MAML1Q92585 1016 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 NAT6Q93015 286 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 FATE1Q969F0 183 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 FAF2Q96CS3 445 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 NUS1Q96E22 293 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 SCRN2Q96FV2 425 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 RNF157Q96PX1 679 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 DEPDC7Q96QD5 511 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 MAK16Q9BXY0 300 aaKnown RBP10.71□□□□□ -0.69
DDX39A-203ENST00000454233 NRSN2Q9GZP1 204 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 WDR26Q9H7D7 661 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 RBM22Q9NW64 420 aaKnown RBP eCLIP10.71□□□□□ -0.692e-6■□□□□ 10.6
DDX39A-203ENST00000454233 INTUQ9ULD6 942 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 PNMA8BQ9ULN7 279 aaPredicted RBP10.71□□□□□ -0.69
DDX39A-203ENST00000454233 TTLL3Q9Y4R7 772 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 RAI2Q9Y5P3 530 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 U3KQA8 63 aa10.71□□□□□ -0.69
DDX39A-203ENST00000454233 ACACAQ13085 2346 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 EME2A4GXA9 379 aaPredicted RBP10.7□□□□□ -0.7
DDX39A-203ENST00000454233 ZNF487B1APH4 448 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 PSMD11O00231 422 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 TNFRSF10CO14798 259 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 YY2O15391 372 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 HEXIM1O94992 359 aaKnown RBP10.7□□□□□ -0.7
DDX39A-203ENST00000454233 KRT1P04264 644 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 HOXC4P09017 264 aaPredicted RBP10.7□□□□□ -0.7
DDX39A-203ENST00000454233 CCNB1P14635 433 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 TRIM23P36406 574 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 SLC1A1P43005 524 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 GBE1Q04446 702 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 TBX2Q13207 712 aaPredicted RBP10.7□□□□□ -0.7
DDX39A-203ENST00000454233 CNGA3Q16281 694 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 LRRC38Q5VT99 294 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 PNCKQ6P2M8 343 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 GUSBP11Q6P575 273 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 EFL1Q7Z2Z2 1120 aaKnown RBP10.7□□□□□ -0.7
DDX39A-203ENST00000454233 VSIG1Q86XK7 387 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 SLC35F3Q8IY50 421 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 CCDC13Q8IYE1 715 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.7□□□□□ -0.7
DDX39A-203ENST00000454233 PQLC3Q8N755 202 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 TPCN2Q8NHX9 752 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 FUBP1Q96AE4 644 aaKnown RBP10.7□□□□□ -0.7
DDX39A-203ENST00000454233 HDAC11Q96DB2 347 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 COQ10AQ96MF6 247 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 BOCQ9BWV1 1114 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 CLPBQ9H078 707 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 PHPT1Q9NRX4 125 aaPredicted RBP10.7□□□□□ -0.7
DDX39A-203ENST00000454233 DDX56Q9NY93 547 aaKnown RBP10.7□□□□□ -0.7
DDX39A-203ENST00000454233 DTLQ9NZJ0 730 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 GULP1Q9UBP9 304 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 MOSPD1Q9UJG1 213 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 RAXQ9Y2V3 346 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 DGKBQ9Y6T7 804 aa10.7□□□□□ -0.7
DDX39A-203ENST00000454233 GOLGA6CA6NDK9 693 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 GOLGA6BA6NDN3 693 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 TMEM202A6NGA9 273 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 NPIPB15A6NHN6 443 aaPredicted RBP10.69□□□□□ -0.7
DDX39A-203ENST00000454233 APOL1O14791 398 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 SPOPO43791 374 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 CELA2BP08218 269 aaPredicted RBP10.69□□□□□ -0.7
DDX39A-203ENST00000454233 GOLGA6DP0CG33 693 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 TNNT1P13805 278 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 ZFXP17010 805 aaPredicted RBP10.69□□□□□ -0.7
DDX39A-203ENST00000454233 CTPS1P17812 591 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 GM2AP17900 193 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 NOP2P46087 812 aaKnown RBP10.69□□□□□ -0.7
DDX39A-203ENST00000454233 DSC2Q02487 901 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 SLC10A2Q12908 348 aaPredicted RBP10.69□□□□□ -0.7
DDX39A-203ENST00000454233 RTP5Q14D33 572 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 TCEA2Q15560 299 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 CDCP2Q5VXM1 449 aa10.69□□□□□ -0.7
DDX39A-203ENST00000454233 ALG1LQ6GMV1 187 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms