RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 SMPD3Q9NY59 655 aaPredicted RBP12.08□□□□□ -0.48
SEC16A-207ENST00000453963 UXTQ9UBK9 157 aaPredicted RBP12.08□□□□□ -0.48
SEC16A-207ENST00000453963 NOCTQ9UK39 431 aaKnown RBP12.08□□□□□ -0.48
SEC16A-207ENST00000453963 SAMHD1Q9Y3Z3 626 aaKnown RBP12.08□□□□□ -0.48
SEC16A-207ENST00000453963 G3V2T6 193 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 BDNFP23560 247 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 PSEN1P49768 467 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 WDR4P57081 412 aaKnown RBP12.07□□□□□ -0.48
SEC16A-207ENST00000453963 RPL38P63173 70 aaKnown RBP12.07□□□□□ -0.48
SEC16A-207ENST00000453963 SGCGQ13326 291 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 CRTC3Q6UUV7 619 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 HPS1Q92902 700 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 NACC2Q96BF6 587 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 KLRG1Q96E93 195 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 VPS35Q96QK1 796 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 KLHL1Q9NR64 748 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 POMPQ9Y244 141 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 TMCC2O75069 709 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 CYP7B1O75881 506 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 CYP2A6P11509 494 aaPredicted RBP12.07□□□□□ -0.48
SEC16A-207ENST00000453963 STAT5AP42229 794 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 SCNN1GP51170 649 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 PTPRNQ16849 979 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 CNPY1Q3B7I2 92 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 PRAMEF19Q5SWL8 479 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 RFWD3Q6PCD5 774 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 PLPPR4Q7Z2D5 763 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 DSG4Q86SJ6 1040 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 GPR180Q86V85 440 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 ZNF557Q8N988 423 aaPredicted RBP12.07□□□□□ -0.48
SEC16A-207ENST00000453963 EBF3Q9H4W6 596 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 KLHL31Q9H511 634 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 CXorf21Q9HAI6 301 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 SPATA31C2B4DYI2 1134 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 IPO13O94829 963 aaKnown RBP12.07□□□□□ -0.48
SEC16A-207ENST00000453963 GPIP06744 558 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 ACADMP11310 421 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 FKBP1BP68106 108 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 SP3Q02447 781 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 TIGD2Q4W5G0 525 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 ANKRD22Q5VYY1 191 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 RGMBQ6NW40 437 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 LRRC52Q8N7C0 313 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 OR2T12Q8NG77 320 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 OR52K2Q8NGK3 314 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 PNPT1Q8TCS8 783 aaKnown RBP12.07□□□□□ -0.48
SEC16A-207ENST00000453963 CD101Q93033 1021 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 MAGEB10Q96LZ2 347 aaPredicted RBP12.07□□□□□ -0.48
SEC16A-207ENST00000453963 NFKBIZQ9BYH8 718 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 SDCBP2Q9H190 292 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 MRPL39Q9NYK5 338 aaKnown RBP12.07□□□□□ -0.48
SEC16A-207ENST00000453963 PCDHGC3Q9UN70 934 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 TMA7Q9Y2S6 64 aaKnown RBP12.07□□□□□ -0.48
SEC16A-207ENST00000453963 AMHP03971 560 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 LINC00032P0C843 101 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 NOS3P29474 1203 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 LIMK2P53671 638 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 AQP4P55087 323 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 EVX2Q03828 476 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 SLC39A12Q504Y0 691 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 PPP1R15BQ5SWA1 713 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 XYLT1Q86Y38 959 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 CPSF7Q8N684 471 aaKnown RBP12.07□□□□□ -0.48
SEC16A-207ENST00000453963 THG1LQ9NWX6 298 aaKnown RBP12.07□□□□□ -0.48
SEC16A-207ENST00000453963 TMEM59LQ9UK28 342 aa12.07□□□□□ -0.48
SEC16A-207ENST00000453963 WBP11Q9Y2W2 641 aaKnown RBP12.07□□□□□ -0.48
SEC16A-207ENST00000453963 HAT1O14929 419 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 UGT2B11O75310 529 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 C4BPAP04003 597 aaKnown RBP12.06□□□□□ -0.48
SEC16A-207ENST00000453963 CDH13P55290 713 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 MRPS5P82675 430 aaKnown RBP12.06□□□□□ -0.48
SEC16A-207ENST00000453963 NOGQ13253 232 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 PCBP1Q15365 356 aaKnown RBP eCLIP12.06□□□□□ -0.48
SEC16A-207ENST00000453963 ARL13AQ5H913 290 aaPredicted RBP12.06□□□□□ -0.48
SEC16A-207ENST00000453963 PAGE2BQ5JRK9 111 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 ZYG11AQ6WRX3 759 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 PAGE2Q7Z2X7 111 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 GPR142Q7Z601 462 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 SAPCD2Q86UD0 394 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 SPATA6LQ8N4H0 392 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 CENPNQ96H22 339 aaPredicted RBP12.06□□□□□ -0.48
SEC16A-207ENST00000453963 CSPG4P5Q96PW8 444 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 CPXM1Q96SM3 734 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 PDGFDQ9GZP0 370 aaPredicted RBP12.06□□□□□ -0.48
SEC16A-207ENST00000453963 TRIM39Q9HCM9 518 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 DMAC2Q9NW81 257 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 TRNAU1APQ9NX07 287 aaKnown RBP12.06□□□□□ -0.48
SEC16A-207ENST00000453963 SAGE2PA6NJ88 616 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 SLC22A2O15244 555 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 CATP04040 527 aaKnown RBP12.06□□□□□ -0.48
SEC16A-207ENST00000453963 TNNI3P19429 210 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 CRATP43155 626 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 SMIM11AP58511 58 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 ENPEPQ07075 957 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 SLC25A52Q3SY17 297 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 WSCD1Q658N2 575 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 LCLAT1Q6UWP7 414 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 SATL1Q86VE3 508 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 CYP4X1Q8N118 509 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 NELL1Q92832 810 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms