RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 ZNHIT6Q9NWK9 470 aaKnown RBP12.94□□□□□ -0.34
CHD3-206ENST00000452447 UVRAGQ9P2Y5 699 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 GULP1Q9UBP9 304 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 B4GALT6Q9UBX8 382 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 FASNP49327 2511 aaKnown RBP12.93□□□□□ -0.34
CHD3-206ENST00000452447 HTRA2O43464 458 aaPredicted RBP12.93□□□□□ -0.34
CHD3-206ENST00000452447 TLX3O43711 291 aaPredicted RBP12.93□□□□□ -0.34
CHD3-206ENST00000452447 CD48P09326 243 aa12.93□□□□□ -0.34
CHD3-206ENST00000452447 TPM1P09493 284 aa12.93□□□□□ -0.34
CHD3-206ENST00000452447 IL4RP24394 825 aa12.93□□□□□ -0.34
CHD3-206ENST00000452447 EIF2S3P41091 472 aaKnown RBP12.93□□□□□ -0.34
CHD3-206ENST00000452447 KIAA1024LP59773 190 aa12.93□□□□□ -0.34
CHD3-206ENST00000452447 TRIM14Q14142 442 aa12.93□□□□□ -0.34
CHD3-206ENST00000452447 SLC18A3Q16572 532 aa12.93□□□□□ -0.34
CHD3-206ENST00000452447 ZFYVE27Q5T4F4 411 aa12.93□□□□□ -0.34
CHD3-206ENST00000452447 SPECC1LQ69YQ0 1117 aa12.93□□□□□ -0.34
CHD3-206ENST00000452447 MAP7D3Q8IWC1 876 aa12.93□□□□□ -0.34
CHD3-206ENST00000452447 LSMEM2Q8N112 164 aa12.93□□□□□ -0.34
CHD3-206ENST00000452447 PGBD5Q8N414 524 aa12.93□□□□□ -0.34
CHD3-206ENST00000452447 ARL10Q8N8L6 244 aa12.93□□□□□ -0.34
CHD3-206ENST00000452447 PLA2G15Q8NCC3 412 aa12.93□□□□□ -0.34
CHD3-206ENST00000452447 OR8K1Q8NGG5 319 aa12.93□□□□□ -0.34
CHD3-206ENST00000452447 PCDH19Q8TAB3 1148 aa12.93□□□□□ -0.34
CHD3-206ENST00000452447 NSMCE3Q96MG7 304 aa12.93□□□□□ -0.34
CHD3-206ENST00000452447 HAUS2Q9NVX0 235 aa12.93□□□□□ -0.34
CHD3-206ENST00000452447 KCTD5Q9NXV2 234 aa12.93□□□□□ -0.34
CHD3-206ENST00000452447 SIRPGQ9P1W8 387 aa12.93□□□□□ -0.34
CHD3-206ENST00000452447 LCMT1Q9UIC8 334 aa12.93□□□□□ -0.34
CHD3-206ENST00000452447 PADI4Q9UM07 663 aa12.93□□□□□ -0.34
CHD3-206ENST00000452447 PHTF1Q9UMS5 762 aa12.93□□□□□ -0.34
CHD3-206ENST00000452447 BPTFQ12830 3046 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 PDE2AO00408 941 aaPredicted RBP12.92□□□□□ -0.34
CHD3-206ENST00000452447 PROSCO94903 275 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 MPOP05164 745 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 CELA2BP08218 269 aaPredicted RBP12.92□□□□□ -0.34
CHD3-206ENST00000452447 KRT7P08729 469 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 CYP2A6P11509 494 aaPredicted RBP12.92□□□□□ -0.34
CHD3-206ENST00000452447 GARSP41250 739 aaKnown RBP12.92□□□□□ -0.34
CHD3-206ENST00000452447 GABREP78334 506 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 ITKQ08881 620 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 ARHGEF7Q14155 803 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 DPYSL3Q14195 570 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 PDK2Q15119 407 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 ISXQ2M1V0 245 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 TBC1D25Q3MII6 688 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 ATP13A4Q4VNC1 1196 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 PERM1Q5SV97 790 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 ARMC12Q5T9G4 340 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 DENND2CQ68D51 928 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 CRTC1Q6UUV9 634 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 RBM44Q6ZP01 1051 aaKnown RBP12.92□□□□□ -0.34
CHD3-206ENST00000452447 NDUFAF2Q8N183 169 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 OR56A4Q8NGH8 313 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 WDR48Q8TAF3 677 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 FAM71BQ8TC56 605 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 FUBP1Q96AE4 644 aaKnown RBP12.92□□□□□ -0.34
CHD3-206ENST00000452447 NUS1Q96E22 293 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 PDXPQ96GD0 296 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 ZNF670Q9BS34 389 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 WDR26Q9H7D7 661 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 SYNDIG1Q9H7V2 258 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 NT5MQ9NPB1 228 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 GPR34Q9UPC5 381 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 DGKBQ9Y6T7 804 aa12.92□□□□□ -0.34
CHD3-206ENST00000452447 TMEM202A6NGA9 273 aa12.91□□□□□ -0.34
CHD3-206ENST00000452447 MFSD11O43934 449 aa12.91□□□□□ -0.34
CHD3-206ENST00000452447 AKR1B10O60218 316 aa12.91□□□□□ -0.34
CHD3-206ENST00000452447 TCEA3O75764 348 aa12.91□□□□□ -0.34
CHD3-206ENST00000452447 PGLSO95336 258 aa12.91□□□□□ -0.34
CHD3-206ENST00000452447 HOXC4P09017 264 aaPredicted RBP12.91□□□□□ -0.34
CHD3-206ENST00000452447 KRT10P13645 584 aa12.91□□□□□ -0.34
CHD3-206ENST00000452447 VIPR1P32241 457 aa12.91□□□□□ -0.34
CHD3-206ENST00000452447 TRIM23P36406 574 aa12.91□□□□□ -0.34
CHD3-206ENST00000452447 TRAF2Q12933 501 aa12.91□□□□□ -0.34
CHD3-206ENST00000452447 CNGA3Q16281 694 aa12.91□□□□□ -0.34
CHD3-206ENST00000452447 ANKRD20A8PQ5CZ79 823 aa12.91□□□□□ -0.34
CHD3-206ENST00000452447 TIGD7Q6NT04 549 aaPredicted RBP12.91□□□□□ -0.34
CHD3-206ENST00000452447 PNCKQ6P2M8 343 aa12.91□□□□□ -0.34
CHD3-206ENST00000452447 USP45Q70EL2 814 aa12.91□□□□□ -0.34
CHD3-206ENST00000452447 SNIP1Q8TAD8 396 aaKnown RBP12.91□□□□□ -0.34
CHD3-206ENST00000452447 GRAMD1AQ96CP6 724 aa12.91□□□□□ -0.34
CHD3-206ENST00000452447 SEMA3CQ99985 751 aa12.91□□□□□ -0.34
CHD3-206ENST00000452447 CCDC3Q9BQI4 270 aa12.91□□□□□ -0.34
CHD3-206ENST00000452447 PACSIN1Q9BY11 444 aa12.91□□□□□ -0.34
CHD3-206ENST00000452447 POLR1EQ9GZS1 481 aaKnown RBP12.91□□□□□ -0.34
CHD3-206ENST00000452447 POLR1BQ9H9Y6 1135 aa12.91□□□□□ -0.34
CHD3-206ENST00000452447 MOSPD1Q9UJG1 213 aa12.91□□□□□ -0.34
CHD3-206ENST00000452447 NENFQ9UMX5 172 aa12.91□□□□□ -0.34
CHD3-206ENST00000452447 TTLL3Q9Y4R7 772 aa12.91□□□□□ -0.34
CHD3-206ENST00000452447 AHCTF1Q8WYP5 2266 aa12.91□□□□□ -0.34
CHD3-206ENST00000452447 SSU72P8A0A1W2PR75 194 aa12.9□□□□□ -0.34
CHD3-206ENST00000452447 GOLGA6CA6NDK9 693 aa12.9□□□□□ -0.34
CHD3-206ENST00000452447 GOLGA6BA6NDN3 693 aa12.9□□□□□ -0.34
CHD3-206ENST00000452447 TNFRSF10CO14798 259 aa12.9□□□□□ -0.34
CHD3-206ENST00000452447 HEXIM1O94992 359 aaKnown RBP12.9□□□□□ -0.34
CHD3-206ENST00000452447 GOLGA6DP0CG33 693 aa12.9□□□□□ -0.34
CHD3-206ENST00000452447 ITPKBP27987 946 aa12.9□□□□□ -0.34
CHD3-206ENST00000452447 LSSP48449 732 aa12.9□□□□□ -0.34
CHD3-206ENST00000452447 ARSEP51690 589 aa12.9□□□□□ -0.34
CHD3-206ENST00000452447 GALNT2Q10471 571 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms