RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 HOXB3P14651 431 aaPredicted RBP12.39□□□□□ -0.43
MSH5-209ENST00000450148 EIF2S3P41091 472 aaKnown RBP12.39□□□□□ -0.43
MSH5-209ENST00000450148 GARSP41250 739 aaKnown RBP12.39□□□□□ -0.43
MSH5-209ENST00000450148 BLKP51451 505 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 SRP54P61011 504 aaKnown RBP12.39□□□□□ -0.43
MSH5-209ENST00000450148 SLC10A2Q12908 348 aaPredicted RBP12.39□□□□□ -0.43
MSH5-209ENST00000450148 NR0B2Q15466 257 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 HADHQ16836 314 aaKnown RBP12.39□□□□□ -0.43
MSH5-209ENST00000450148 ANKRD20A8PQ5CZ79 823 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 MARC1Q5VT66 337 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 SPECC1LQ69YQ0 1117 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 LVRNQ6Q4G3 990 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 H2AFVQ71UI9 128 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 VSTM4Q8IW00 320 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 SNIP1Q8TAD8 396 aaKnown RBP12.39□□□□□ -0.43
MSH5-209ENST00000450148 MAPK15Q8TD08 544 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 PIH1D2Q8WWB5 315 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 OR1E3Q8WZA6 343 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 CRELD1Q96HD1 420 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 DEPDC7Q96QD5 511 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 MCCC1Q96RQ3 725 aaPredicted RBP12.39□□□□□ -0.43
MSH5-209ENST00000450148 RBM15Q96T37 977 aaKnown RBP eCLIP12.39□□□□□ -0.43
MSH5-209ENST00000450148 FGF22Q9HCT0 170 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 EVA1BQ9NVM1 165 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 NCKIPSDQ9NZQ3 722 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 CTTNBP2NLQ9P2B4 639 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 KLQ9UEF7 1012 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 PHTF1Q9UMS5 762 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 AK5Q9Y6K8 562 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 LAMA5O15230 3695 aa12.39□□□□□ -0.43
MSH5-209ENST00000450148 NPIPB15A6NHN6 443 aaPredicted RBP12.38□□□□□ -0.43
MSH5-209ENST00000450148 MAP3K6O95382 1288 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 CPP00450 1065 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 FUCA1P04066 466 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 TPM3P06753 285 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 PDHA1P08559 390 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 HTR1BP28222 390 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 VIPR1P32241 457 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 MAN1A1P33908 653 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 GJC1P36383 396 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 SSR1P43307 286 aaKnown RBP12.38□□□□□ -0.43
MSH5-209ENST00000450148 PDX1P52945 283 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 TRIM14Q14142 442 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 PDK2Q15119 407 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 ELOCQ15369 112 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 TCEA2Q15560 299 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 ISXQ2M1V0 245 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 PNCKQ6P2M8 343 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 CRTC1Q6UUV9 634 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 RD3Q7Z3Z2 195 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 HSD11B1LQ7Z5J1 315 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 TSPAN33Q86UF1 283 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 PDZD3Q86UT5 571 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 BBS5Q8N3I7 341 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 SDR16C5Q8N3Y7 309 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 KYQ8NBH2 561 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 PDCD6IPQ8WUM4 868 aaKnown RBP12.38□□□□□ -0.43
MSH5-209ENST00000450148 LRRN4Q8WUT4 740 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 CTNNBL1Q8WYA6 563 aaPredicted RBP12.38□□□□□ -0.43
MSH5-209ENST00000450148 RAPGEF5Q92565 580 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 FATE1Q969F0 183 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 DTD2Q96FN9 168 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 SCRN2Q96FV2 425 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 TSGA13Q96PP4 275 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 SMIM14Q96QK8 99 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 SEMA3CQ99985 751 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 NT5MQ9NPB1 228 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 MRPL40Q9NQ50 206 aaKnown RBP12.38□□□□□ -0.43
MSH5-209ENST00000450148 ABHD10Q9NUJ1 306 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 RABGEF1Q9UJ41 708 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 PADI4Q9UM07 663 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 ENTPD2Q9Y5L3 495 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 PTPRQQ9UMZ3 2332 aa12.38□□□□□ -0.43
MSH5-209ENST00000450148 A0A0U1RQS6 177 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 PSMD11O00231 422 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 NTN3O00634 580 aaPredicted RBP12.37□□□□□ -0.43
MSH5-209ENST00000450148 TNFRSF10CO14798 259 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 MATN3O15232 486 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 CBFA2T2O43439 604 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 MFAP3LO75121 409 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 DXOO77932 396 aaKnown RBP12.37□□□□□ -0.43
MSH5-209ENST00000450148 MTA2O94776 668 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 PRLP01236 227 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 TNFP01375 233 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 ALPIP09923 528 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 CTSEP14091 401 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 KDELR1P24390 212 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 CCNCP24863 283 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 ITPKBP27987 946 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 GBE1Q04446 702 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 ACOX1Q15067 660 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 TBC1D25Q3MII6 688 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 ARMC12Q5T9G4 340 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 OGFOD3Q6PK18 319 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 RFLNAQ6ZTI6 216 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 TECPR1Q7Z6L1 1165 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 SFTPA2Q8IWL1 248 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 ARL10Q8N8L6 244 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 KCTD6Q8NC69 237 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 GPR156Q8NFN8 814 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms