RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 LRRC49Q8IUZ0 686 aa17.63■□□□□ 0.41
FAM3A-216ENST00000449971 RHOT2Q8IXI1 618 aa17.63■□□□□ 0.41
FAM3A-216ENST00000449971 DENND6BQ8NEG7 585 aa17.63■□□□□ 0.41
FAM3A-216ENST00000449971 MED8Q96G25 268 aa17.63■□□□□ 0.41
FAM3A-216ENST00000449971 ATXN7L3BQ96GX2 97 aa17.63■□□□□ 0.41
FAM3A-216ENST00000449971 ZNF670Q9BS34 389 aa17.63■□□□□ 0.41
FAM3A-216ENST00000449971 DPH1Q9BZG8 443 aa17.63■□□□□ 0.41
FAM3A-216ENST00000449971 SYNDIG1Q9H7V2 258 aa17.63■□□□□ 0.41
FAM3A-216ENST00000449971 ATP8A1Q9Y2Q0 1164 aa17.63■□□□□ 0.41
FAM3A-216ENST00000449971 COQ6Q9Y2Z9 468 aa17.63■□□□□ 0.41
FAM3A-216ENST00000449971 SPTY2D1-AS1A0A0U1RR47 76 aa17.62■□□□□ 0.41
FAM3A-216ENST00000449971 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.62■□□□□ 0.41
FAM3A-216ENST00000449971 PMS2P1A4D2B8 440 aa17.62■□□□□ 0.41
FAM3A-216ENST00000449971 K7ESM1 405 aa17.62■□□□□ 0.41
FAM3A-216ENST00000449971 LZTS3O60299 673 aaPredicted RBP17.62■□□□□ 0.41
FAM3A-216ENST00000449971 GIMD1P0DJR0 217 aa17.62■□□□□ 0.41
FAM3A-216ENST00000449971 TGM2P21980 687 aa17.62■□□□□ 0.41
FAM3A-216ENST00000449971 ARHGAP25P42331 645 aa17.62■□□□□ 0.41
FAM3A-216ENST00000449971 MMP13P45452 471 aa17.62■□□□□ 0.41
FAM3A-216ENST00000449971 LIG3P49916 1009 aa17.62■□□□□ 0.41
FAM3A-216ENST00000449971 DUSP3P51452 185 aaPredicted RBP17.62■□□□□ 0.41
FAM3A-216ENST00000449971 PFN3P60673 137 aa17.62■□□□□ 0.41
FAM3A-216ENST00000449971 POLR2LP62875 67 aaKnown RBP17.62■□□□□ 0.41
FAM3A-216ENST00000449971 FZD2Q14332 565 aa17.62■□□□□ 0.41
FAM3A-216ENST00000449971 PAFAH1B3Q15102 231 aaKnown RBP17.62■□□□□ 0.41
FAM3A-216ENST00000449971 ISXQ2M1V0 245 aa17.62■□□□□ 0.41
FAM3A-216ENST00000449971 NCBP2-AS2Q69YL0 99 aa17.62■□□□□ 0.41
FAM3A-216ENST00000449971 PGBD5Q8N414 524 aa17.62■□□□□ 0.41
FAM3A-216ENST00000449971 TC2NQ8N9U0 490 aa17.62■□□□□ 0.41
FAM3A-216ENST00000449971 RAPGEF5Q92565 580 aa17.62■□□□□ 0.41
FAM3A-216ENST00000449971 IFT43Q96FT9 208 aa17.62■□□□□ 0.41
FAM3A-216ENST00000449971 NSMCE3Q96MG7 304 aa17.62■□□□□ 0.41
FAM3A-216ENST00000449971 NUDCD1Q96RS6 583 aa17.62■□□□□ 0.41
FAM3A-216ENST00000449971 MBNL1Q9NR56 388 aaKnown RBP17.62■□□□□ 0.41
FAM3A-216ENST00000449971 EVA1BQ9NVM1 165 aa17.62■□□□□ 0.41
FAM3A-216ENST00000449971 NLGN3Q9NZ94 848 aa17.62■□□□□ 0.41
FAM3A-216ENST00000449971 PCDHGC4Q9Y5F7 938 aa17.62■□□□□ 0.41
FAM3A-216ENST00000449971 HEMK1Q9Y5R4 338 aaPredicted RBP17.62■□□□□ 0.41
FAM3A-216ENST00000449971 LY6G6EA0A0G2JKS1 128 aa17.61■□□□□ 0.41
FAM3A-216ENST00000449971 A0A1W2PNU3 283 aaPredicted RBP17.61■□□□□ 0.41
FAM3A-216ENST00000449971 TRAFD1O14545 582 aaPredicted RBP17.61■□□□□ 0.41
FAM3A-216ENST00000449971 MFSD11O43934 449 aa17.61■□□□□ 0.41
FAM3A-216ENST00000449971 MAP3K6O95382 1288 aa17.61■□□□□ 0.41
FAM3A-216ENST00000449971 KDELR1P24390 212 aa17.61■□□□□ 0.41
FAM3A-216ENST00000449971 IGFALSP35858 605 aa17.61■□□□□ 0.41
FAM3A-216ENST00000449971 MAGEA1P43355 309 aa17.61■□□□□ 0.41
FAM3A-216ENST00000449971 ZNF75DP51815 510 aa17.61■□□□□ 0.41
FAM3A-216ENST00000449971 THOP1P52888 689 aa17.61■□□□□ 0.41
FAM3A-216ENST00000449971 MAXP61244 160 aa17.61■□□□□ 0.41
FAM3A-216ENST00000449971 ITKQ08881 620 aa17.61■□□□□ 0.41
FAM3A-216ENST00000449971 GALNT2Q10471 571 aa17.61■□□□□ 0.41
FAM3A-216ENST00000449971 LRRC14Q15048 493 aa17.61■□□□□ 0.41
FAM3A-216ENST00000449971 C6orf132Q5T0Z8 1188 aa17.61■□□□□ 0.41
FAM3A-216ENST00000449971 GUSBP11Q6P575 273 aa17.61■□□□□ 0.41
FAM3A-216ENST00000449971 EFL1Q7Z2Z2 1120 aaKnown RBP17.61■□□□□ 0.41
FAM3A-216ENST00000449971 TP53I13Q8NBR0 393 aaPredicted RBP17.61■□□□□ 0.41
FAM3A-216ENST00000449971 PDCD6IPQ8WUM4 868 aaKnown RBP17.61■□□□□ 0.41
FAM3A-216ENST00000449971 ECHDC3Q96DC8 303 aa17.61■□□□□ 0.41
FAM3A-216ENST00000449971 FAM117AQ9C073 453 aa17.61■□□□□ 0.41
FAM3A-216ENST00000449971 NOD2Q9HC29 1040 aa17.61■□□□□ 0.41
FAM3A-216ENST00000449971 NT5MQ9NPB1 228 aa17.61■□□□□ 0.41
FAM3A-216ENST00000449971 GPR27Q9NS67 375 aa17.61■□□□□ 0.41
FAM3A-216ENST00000449971 INTUQ9ULD6 942 aa17.61■□□□□ 0.41
FAM3A-216ENST00000449971 U3KQA8 63 aa17.61■□□□□ 0.41
FAM3A-216ENST00000449971 BOD1L1Q8NFC6 3051 aa17.61■□□□□ 0.41
FAM3A-216ENST00000449971 TRPM6Q9BX84 2022 aa17.6■□□□□ 0.41
FAM3A-216ENST00000449971 LRRD1A4D1F6 860 aa17.6■□□□□ 0.41
FAM3A-216ENST00000449971 NEMP2A6NFY4 417 aa17.6■□□□□ 0.41
FAM3A-216ENST00000449971 A8MX80 341 aa17.6■□□□□ 0.41
FAM3A-216ENST00000449971 K7ENP7 123 aa17.6■□□□□ 0.41
FAM3A-216ENST00000449971 SCAMP1O15126 338 aa17.6■□□□□ 0.41
FAM3A-216ENST00000449971 MTA2O94776 668 aa17.6■□□□□ 0.41
FAM3A-216ENST00000449971 TNNT1P13805 278 aa17.6■□□□□ 0.41
FAM3A-216ENST00000449971 MMP12P39900 470 aa17.6■□□□□ 0.41
FAM3A-216ENST00000449971 GARSP41250 739 aaKnown RBP17.6■□□□□ 0.41
FAM3A-216ENST00000449971 HNRNPKP61978 463 aaKnown RBP eCLIP17.6■□□□□ 0.41
FAM3A-216ENST00000449971 PTK2BQ14289 1009 aa17.6■□□□□ 0.41
FAM3A-216ENST00000449971 IRF4Q15306 451 aa17.6■□□□□ 0.41
FAM3A-216ENST00000449971 TPRG1LQ5T0D9 272 aa17.6■□□□□ 0.41
FAM3A-216ENST00000449971 INO80CQ6PI98 192 aaPredicted RBP17.6■□□□□ 0.41
FAM3A-216ENST00000449971 CCDC81Q6ZN84 652 aa17.6■□□□□ 0.41
FAM3A-216ENST00000449971 PARGQ86W56 976 aa17.6■□□□□ 0.41
FAM3A-216ENST00000449971 PQLC3Q8N755 202 aa17.6■□□□□ 0.41
FAM3A-216ENST00000449971 MGME1Q9BQP7 344 aa17.6■□□□□ 0.41
FAM3A-216ENST00000449971 ANP32EQ9BTT0 268 aa17.6■□□□□ 0.41
FAM3A-216ENST00000449971 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.6■□□□□ 0.41
FAM3A-216ENST00000449971 H3BM21 787 aa17.59■□□□□ 0.41
FAM3A-216ENST00000449971 CSF2P04141 144 aa17.59■□□□□ 0.41
FAM3A-216ENST00000449971 GP1BAP07359 652 aa17.59■□□□□ 0.41
FAM3A-216ENST00000449971 CR2P20023 1033 aa17.59■□□□□ 0.41
FAM3A-216ENST00000449971 NOP2P46087 812 aaKnown RBP17.59■□□□□ 0.41
FAM3A-216ENST00000449971 YPEL5P62699 121 aa17.59■□□□□ 0.41
FAM3A-216ENST00000449971 NFKB2Q00653 900 aa17.59■□□□□ 0.41
FAM3A-216ENST00000449971 GBE1Q04446 702 aa17.59■□□□□ 0.41
FAM3A-216ENST00000449971 IFI16Q16666 785 aaKnown RBP17.59■□□□□ 0.41
FAM3A-216ENST00000449971 WSCD2Q2TBF2 565 aa17.59■□□□□ 0.41
FAM3A-216ENST00000449971 DEFB133Q30KQ1 61 aa17.59■□□□□ 0.41
FAM3A-216ENST00000449971 ODF2Q5BJF6 829 aa17.59■□□□□ 0.41
FAM3A-216ENST00000449971 TIGD7Q6NT04 549 aaPredicted RBP17.59■□□□□ 0.41
FAM3A-216ENST00000449971 TEX26Q8N6G2 289 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms