RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 GALNT2Q10471 571 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 TRAF2Q12933 501 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 ARHGEF7Q14155 803 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 RTP5Q14D33 572 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 TCEA2Q15560 299 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 IFI16Q16666 785 aaKnown RBP15.32■□□□□ 0.04
CHD3-205ENST00000449744 ARMC12Q5T9G4 340 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 DENND2CQ68D51 928 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 GUSBP11Q6P575 273 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 GKN2Q86XP6 184 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 SDR16C5Q8N3Y7 309 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 PLA2G15Q8NCC3 412 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 PCDH19Q8TAB3 1148 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 HNRNPLLQ8WVV9 542 aaKnown RBP15.32■□□□□ 0.04
CHD3-205ENST00000449744 SPOCK2Q92563 424 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 NAT6Q93015 286 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 NUS1Q96E22 293 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 CHP1Q99653 195 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 SEMA3CQ99985 751 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 BOCQ9BWV1 1114 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 POLR1EQ9GZS1 481 aaKnown RBP15.32■□□□□ 0.04
CHD3-205ENST00000449744 CLPBQ9H078 707 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 KCTD5Q9NXV2 234 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 GULP1Q9UBP9 304 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 GPSM3Q9Y4H4 160 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 PDE2AO00408 941 aaPredicted RBP15.31■□□□□ 0.04
CHD3-205ENST00000449744 MATN3O15232 486 aa15.31■□□□□ 0.04
CHD3-205ENST00000449744 PGLSO95336 258 aa15.31■□□□□ 0.04
CHD3-205ENST00000449744 MAP3K6O95382 1288 aa15.31■□□□□ 0.04
CHD3-205ENST00000449744 CELA2BP08218 269 aaPredicted RBP15.31■□□□□ 0.04
CHD3-205ENST00000449744 MX2P20592 715 aa15.31■□□□□ 0.04
CHD3-205ENST00000449744 KIAA1024LP59773 190 aa15.31■□□□□ 0.04
CHD3-205ENST00000449744 CNGA3Q16281 694 aa15.31■□□□□ 0.04
CHD3-205ENST00000449744 CDCP2Q5VXM1 449 aa15.31■□□□□ 0.04
CHD3-205ENST00000449744 PNCKQ6P2M8 343 aa15.31■□□□□ 0.04
CHD3-205ENST00000449744 LVRNQ6Q4G3 990 aa15.31■□□□□ 0.04
CHD3-205ENST00000449744 USP45Q70EL2 814 aa15.31■□□□□ 0.04
CHD3-205ENST00000449744 CNGA4Q8IV77 575 aa15.31■□□□□ 0.04
CHD3-205ENST00000449744 RHOT2Q8IXI1 618 aa15.31■□□□□ 0.04
CHD3-205ENST00000449744 SLC35F3Q8IY50 421 aa15.31■□□□□ 0.04
CHD3-205ENST00000449744 TEX26Q8N6G2 289 aa15.31■□□□□ 0.04
CHD3-205ENST00000449744 OR56A4Q8NGH8 313 aa15.31■□□□□ 0.04
CHD3-205ENST00000449744 TPCN2Q8NHX9 752 aa15.31■□□□□ 0.04
CHD3-205ENST00000449744 SLC35G2Q8TBE7 412 aa15.31■□□□□ 0.04
CHD3-205ENST00000449744 FUBP1Q96AE4 644 aaKnown RBP15.31■□□□□ 0.04
CHD3-205ENST00000449744 ZNF830Q96NB3 372 aaPredicted RBP15.31■□□□□ 0.04
CHD3-205ENST00000449744 DCBLD2Q96PD2 775 aa15.31■□□□□ 0.04
CHD3-205ENST00000449744 WDR26Q9H7D7 661 aa15.31■□□□□ 0.04
CHD3-205ENST00000449744 NHEJ1Q9H9Q4 299 aaPredicted RBP15.31■□□□□ 0.04
CHD3-205ENST00000449744 SPTLC3Q9NUV7 552 aa15.31■□□□□ 0.04
CHD3-205ENST00000449744 RBM22Q9NW64 420 aaKnown RBP eCLIP15.31■□□□□ 0.04
CHD3-205ENST00000449744 MOSPD1Q9UJG1 213 aa15.31■□□□□ 0.04
CHD3-205ENST00000449744 PADI4Q9UM07 663 aa15.31■□□□□ 0.04
CHD3-205ENST00000449744 TTLL3Q9Y4R7 772 aa15.31■□□□□ 0.04
CHD3-205ENST00000449744 MYLKQ15746 1914 aa15.31■□□□□ 0.04
CHD3-205ENST00000449744 SHROOM3Q8TF72 1996 aa15.31■□□□□ 0.04
CHD3-205ENST00000449744 CSO75390 466 aaKnown RBP15.3■□□□□ 0.04
CHD3-205ENST00000449744 HEXIM1O94992 359 aaKnown RBP15.3■□□□□ 0.04
CHD3-205ENST00000449744 CES1P23141 567 aa15.3■□□□□ 0.04
CHD3-205ENST00000449744 KDELR1P24390 212 aa15.3■□□□□ 0.04
CHD3-205ENST00000449744 CCNCP24863 283 aa15.3■□□□□ 0.04
CHD3-205ENST00000449744 ARHGAP25P42331 645 aa15.3■□□□□ 0.04
CHD3-205ENST00000449744 COL28A1Q2UY09 1125 aa15.3■□□□□ 0.04
CHD3-205ENST00000449744 ODF2Q5BJF6 829 aa15.3■□□□□ 0.04
CHD3-205ENST00000449744 CRTC1Q6UUV9 634 aa15.3■□□□□ 0.04
CHD3-205ENST00000449744 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.3■□□□□ 0.04
CHD3-205ENST00000449744 ARL10Q8N8L6 244 aa15.3■□□□□ 0.04
CHD3-205ENST00000449744 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.3■□□□□ 0.04
CHD3-205ENST00000449744 SCRN2Q96FV2 425 aa15.3■□□□□ 0.04
CHD3-205ENST00000449744 PDXPQ96GD0 296 aa15.3■□□□□ 0.04
CHD3-205ENST00000449744 COQ10AQ96MF6 247 aa15.3■□□□□ 0.04
CHD3-205ENST00000449744 SIRPGQ9P1W8 387 aa15.3■□□□□ 0.04
CHD3-205ENST00000449744 PCDHB1Q9Y5F3 818 aa15.3■□□□□ 0.04
CHD3-205ENST00000449744 RAI2Q9Y5P3 530 aa15.3■□□□□ 0.04
CHD3-205ENST00000449744 DGKBQ9Y6T7 804 aa15.3■□□□□ 0.04
CHD3-205ENST00000449744 ZZEF1O43149 2961 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 LRRD1A4D1F6 860 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 GOLGA6CA6NDK9 693 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 GOLGA6BA6NDN3 693 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 TMEM202A6NGA9 273 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 AKR1B15C9JRZ8 316 aaPredicted RBP15.29■□□□□ 0.04
CHD3-205ENST00000449744 PSMD11O00231 422 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 HOXC4P09017 264 aaPredicted RBP15.29■□□□□ 0.04
CHD3-205ENST00000449744 GOLGA6DP0CG33 693 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 CTPS1P17812 591 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 GM2AP17900 193 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 TGM2P21980 687 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 CA4P22748 312 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 ACTN2P35609 894 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 TRIM23P36406 574 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 EPHB1P54762 984 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 PERM1Q5SV97 790 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 LRRC69Q6ZNQ3 347 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 CCNYQ8ND76 341 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 WDR48Q8TAF3 677 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 OR1E3Q8WZA6 343 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 RAPGEF5Q92565 580 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 MAML1Q92585 1016 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 FAF2Q96CS3 445 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 TSGA13Q96PP4 275 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms