RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 GREB1Q4ZG55 1949 aa16.98■□□□□ 0.31
TOM1-210ENST00000449058 DNAJA2O60884 412 aa16.97■□□□□ 0.31
TOM1-210ENST00000449058 RAMP2O60895 175 aa16.97■□□□□ 0.31
TOM1-210ENST00000449058 FDXRP22570 491 aa16.97■□□□□ 0.31
TOM1-210ENST00000449058 POLD3Q15054 466 aaPredicted RBP16.97■□□□□ 0.31
TOM1-210ENST00000449058 PIM3Q86V86 326 aa16.97■□□□□ 0.31
TOM1-210ENST00000449058 TTC9BQ8N6N2 239 aa16.97■□□□□ 0.31
TOM1-210ENST00000449058 GPR150Q8NGU9 434 aa16.97■□□□□ 0.31
TOM1-210ENST00000449058 CENPKQ9BS16 269 aa16.97■□□□□ 0.31
TOM1-210ENST00000449058 MTF2Q9Y483 593 aaPredicted RBP16.97■□□□□ 0.31
TOM1-210ENST00000449058 TXNDC9O14530 226 aa16.97■□□□□ 0.31
TOM1-210ENST00000449058 CST5P28325 142 aaPredicted RBP16.97■□□□□ 0.31
TOM1-210ENST00000449058 PBX3P40426 434 aa16.97■□□□□ 0.31
TOM1-210ENST00000449058 TIAL1Q01085 375 aaKnown RBP eCLIP16.97■□□□□ 0.31
TOM1-210ENST00000449058 PDAP1Q13442 181 aaKnown RBP16.97■□□□□ 0.31
TOM1-210ENST00000449058 AGKQ53H12 422 aa16.97■□□□□ 0.31
TOM1-210ENST00000449058 UNC50Q53HI1 259 aa16.97■□□□□ 0.31
TOM1-210ENST00000449058 VARS2Q5ST30 1063 aaKnown RBP16.97■□□□□ 0.31
TOM1-210ENST00000449058 REP15Q6BDI9 236 aa16.97■□□□□ 0.31
TOM1-210ENST00000449058 ZNF549Q6P9A3 640 aa16.97■□□□□ 0.31
TOM1-210ENST00000449058 LARP4Q71RC2 724 aaKnown RBP eCLIP16.97■□□□□ 0.317e-7■■■■■ 34.9
TOM1-210ENST00000449058 ZNF354CQ86Y25 554 aa16.97■□□□□ 0.31
TOM1-210ENST00000449058 PCDH20Q8N6Y1 951 aaKnown RBP16.97■□□□□ 0.31
TOM1-210ENST00000449058 ZFAND2BQ8WV99 257 aa16.97■□□□□ 0.31
TOM1-210ENST00000449058 PTERQ96BW5 349 aa16.97■□□□□ 0.31
TOM1-210ENST00000449058 FEM1CQ96JP0 617 aa16.97■□□□□ 0.31
TOM1-210ENST00000449058 TBATAQ96M53 351 aa16.97■□□□□ 0.31
TOM1-210ENST00000449058 PKP2Q99959 881 aa16.97■□□□□ 0.31
TOM1-210ENST00000449058 MRPL40Q9NQ50 206 aaKnown RBP16.97■□□□□ 0.31
TOM1-210ENST00000449058 OLA1Q9NTK5 396 aaKnown RBP16.97■□□□□ 0.31
TOM1-210ENST00000449058 POLR3BQ9NW08 1133 aaPredicted RBP16.97■□□□□ 0.31
TOM1-210ENST00000449058 ADA2Q9NZK5 511 aa16.97■□□□□ 0.31
TOM1-210ENST00000449058 RAB26Q9ULW5 256 aa16.97■□□□□ 0.31
TOM1-210ENST00000449058 CENPFP49454 3210 aa16.97■□□□□ 0.31
TOM1-210ENST00000449058 ANKRD36A6QL64 1941 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 E7ENX8 843 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 TRIM24O15164 1050 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 YWHAQP27348 245 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 ETFBP38117 255 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 GRIA2P42262 883 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 OR1G1P47890 313 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 HERVK_113P63132 956 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 BTG3Q14201 252 aaPredicted RBP16.96■□□□□ 0.31
TOM1-210ENST00000449058 TRIM25Q14258 630 aaKnown RBP16.96■□□□□ 0.31
TOM1-210ENST00000449058 SLC24A5Q71RS6 500 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 MIB1Q86YT6 1006 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 TMEM102Q8N9M5 508 aaPredicted RBP16.96■□□□□ 0.31
TOM1-210ENST00000449058 FAM156AQ8NDB6 213 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 GPR152Q8TDT2 470 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 TOP1MTQ969P6 601 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 SEMA3CQ99985 751 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 ERVK-6Q9BXR3 956 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 MARCH2Q9P0N8 246 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 NOD1Q9Y239 953 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 CHD5Q8TDI0 1954 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 C15orf38-AP3S2A0A0A6YYH1 394 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 PRAMEF11O60813 436 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 GJB3O75712 270 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 C8BP07358 591 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 SNRPB2P08579 225 aaKnown RBP16.96■□□□□ 0.31
TOM1-210ENST00000449058 CD1DP15813 335 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 HOXB8P17481 243 aaPredicted RBP16.96■□□□□ 0.31
TOM1-210ENST00000449058 FLT3LGP49771 235 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 ATP4BP51164 291 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 SUOXP51687 545 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 YBEYP58557 167 aaPredicted RBP16.96■□□□□ 0.31
TOM1-210ENST00000449058 LAMB3Q13751 1172 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 UGT3A2Q3SY77 523 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 RGMBQ6NW40 437 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 ARPINQ7Z6K5 226 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 CIR1Q86X95 450 aaPredicted RBP16.96■□□□□ 0.31
TOM1-210ENST00000449058 ATAD1Q8NBU5 361 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 LINC01599Q8WXQ3 324 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 FBXO32Q969P5 355 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 SPATA16Q9BXB7 569 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 POLR1EQ9GZS1 481 aaKnown RBP16.96■□□□□ 0.31
TOM1-210ENST00000449058 Q9H521 79 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 CCDC167Q9P0B6 97 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 CRYL1Q9Y2S2 319 aa16.96■□□□□ 0.31
TOM1-210ENST00000449058 PRG3Q9Y2Y8 225 aaPredicted RBP16.96■□□□□ 0.31
TOM1-210ENST00000449058 EME2A4GXA9 379 aaPredicted RBP16.95■□□□□ 0.3
TOM1-210ENST00000449058 SYN3O14994 580 aa16.95■□□□□ 0.3
TOM1-210ENST00000449058 MUSKO15146 869 aa16.95■□□□□ 0.3
TOM1-210ENST00000449058 GPC4O75487 556 aa16.95■□□□□ 0.3
TOM1-210ENST00000449058 SUPT7LO94864 414 aa16.95■□□□□ 0.3
TOM1-210ENST00000449058 CRTAMO95727 393 aa16.95■□□□□ 0.3
TOM1-210ENST00000449058 GLP2RO95838 553 aa16.95■□□□□ 0.3
TOM1-210ENST00000449058 GOT2P00505 430 aaKnown RBP16.95■□□□□ 0.3
TOM1-210ENST00000449058 EPOP01588 193 aa16.95■□□□□ 0.3
TOM1-210ENST00000449058 FGF1P05230 155 aa16.95■□□□□ 0.3
TOM1-210ENST00000449058 HLA-DPA1P20036 260 aa16.95■□□□□ 0.3
TOM1-210ENST00000449058 TCN1P20061 433 aaPredicted RBP16.95■□□□□ 0.3
TOM1-210ENST00000449058 ACVRL1P37023 503 aa16.95■□□□□ 0.3
TOM1-210ENST00000449058 ATXN3P54252 364 aaPredicted RBP16.95■□□□□ 0.3
TOM1-210ENST00000449058 FCGRTP55899 365 aa16.95■□□□□ 0.3
TOM1-210ENST00000449058 FAM189BP81408 668 aa16.95■□□□□ 0.3
TOM1-210ENST00000449058 ACBD5Q5T8D3 534 aaPredicted RBP16.95■□□□□ 0.3
TOM1-210ENST00000449058 CLEC6AQ6EIG7 209 aa16.95■□□□□ 0.3
TOM1-210ENST00000449058 C8orf82Q6P1X6 216 aaPredicted RBP16.95■□□□□ 0.3
TOM1-210ENST00000449058 SPATA24Q86W54 205 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms