RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 UPF3AQ9H1J1 476 aaKnown RBP10.78□□□□□ -0.68
LINC00342-202ENST00000448494 WDR70Q9NW82 654 aa10.78□□□□□ -0.68
LINC00342-202ENST00000448494 SRP68Q9UHB9 627 aaKnown RBP10.78□□□□□ -0.68
LINC00342-202ENST00000448494 CHORDC1Q9UHD1 332 aaPredicted RBP10.78□□□□□ -0.68
LINC00342-202ENST00000448494 DTX4Q9Y2E6 619 aa10.78□□□□□ -0.68
LINC00342-202ENST00000448494 CDY1Q9Y6F8 540 aa10.78□□□□□ -0.68
LINC00342-202ENST00000448494 HSPE1-MOB4S4R3N1 261 aa10.78□□□□□ -0.68
LINC00342-202ENST00000448494 A3GALT2U3KPV4 340 aa10.78□□□□□ -0.68
LINC00342-202ENST00000448494 ROBO2Q9HCK4 1378 aa10.78□□□□□ -0.68
LINC00342-202ENST00000448494 HNRNPCL2B2RXH8 293 aa10.77□□□□□ -0.68
LINC00342-202ENST00000448494 C19orf81C9J6K1 198 aa10.77□□□□□ -0.68
LINC00342-202ENST00000448494 CLIC3O95833 236 aa10.77□□□□□ -0.68
LINC00342-202ENST00000448494 NR3C1P04150 777 aa10.77□□□□□ -0.68
LINC00342-202ENST00000448494 PROS1P07225 676 aa10.77□□□□□ -0.68
LINC00342-202ENST00000448494 ZNF250P15622 560 aa10.77□□□□□ -0.68
LINC00342-202ENST00000448494 CRHBPP24387 322 aa10.77□□□□□ -0.68
LINC00342-202ENST00000448494 MAPK4P31152 587 aa10.77□□□□□ -0.68
LINC00342-202ENST00000448494 FMO5P49326 533 aa10.77□□□□□ -0.68
LINC00342-202ENST00000448494 PRKCDQ05655 676 aa10.77□□□□□ -0.68
LINC00342-202ENST00000448494 LTB4RQ15722 352 aa10.77□□□□□ -0.68
LINC00342-202ENST00000448494 GEN1Q17RS7 908 aa10.77□□□□□ -0.68
LINC00342-202ENST00000448494 BRDTQ58F21 947 aaPredicted RBP10.77□□□□□ -0.68
LINC00342-202ENST00000448494 NXNL2Q5VZ03 156 aa10.77□□□□□ -0.68
LINC00342-202ENST00000448494 KRT39Q6A163 491 aa10.77□□□□□ -0.68
LINC00342-202ENST00000448494 PODNQ7Z5L7 613 aa10.77□□□□□ -0.68
LINC00342-202ENST00000448494 KATNAL2Q8IYT4 538 aa10.77□□□□□ -0.68
LINC00342-202ENST00000448494 PDIK1LQ8N165 341 aa10.77□□□□□ -0.68
LINC00342-202ENST00000448494 YIPF5Q969M3 257 aa10.77□□□□□ -0.68
LINC00342-202ENST00000448494 PCDHB18PQ96TA0 734 aa10.77□□□□□ -0.68
LINC00342-202ENST00000448494 APOL4Q9BPW4 351 aa10.77□□□□□ -0.68
LINC00342-202ENST00000448494 FAM118BQ9BPY3 351 aa10.77□□□□□ -0.68
LINC00342-202ENST00000448494 MLPHQ9BV36 600 aaPredicted RBP10.77□□□□□ -0.68
LINC00342-202ENST00000448494 ING3Q9NXR8 418 aa10.77□□□□□ -0.68
LINC00342-202ENST00000448494 SRRDQ9UH36 339 aa10.77□□□□□ -0.68
LINC00342-202ENST00000448494 CYB5R1Q9UHQ9 305 aa10.77□□□□□ -0.68
LINC00342-202ENST00000448494 GINS2Q9Y248 185 aa10.77□□□□□ -0.68
LINC00342-202ENST00000448494 ARFGEF2Q9Y6D5 1785 aa10.77□□□□□ -0.69
LINC00342-202ENST00000448494 KATNA1O75449 491 aa10.77□□□□□ -0.69
LINC00342-202ENST00000448494 FCGR1AP12314 374 aa10.77□□□□□ -0.69
LINC00342-202ENST00000448494 CCNA1P78396 465 aa10.77□□□□□ -0.69
LINC00342-202ENST00000448494 SLC10A2Q12908 348 aaPredicted RBP10.77□□□□□ -0.69
LINC00342-202ENST00000448494 ZNF273Q14593 569 aa10.77□□□□□ -0.69
LINC00342-202ENST00000448494 TMEM236Q5W0B7 351 aa10.77□□□□□ -0.69
LINC00342-202ENST00000448494 PHC2Q8IXK0 858 aa10.77□□□□□ -0.69
LINC00342-202ENST00000448494 NAT8LQ8N9F0 302 aa10.77□□□□□ -0.69
LINC00342-202ENST00000448494 ZNF680Q8NEM1 530 aa10.77□□□□□ -0.69
LINC00342-202ENST00000448494 MCFD2Q8NI22 146 aa10.77□□□□□ -0.69
LINC00342-202ENST00000448494 SETD6Q8TBK2 473 aa10.77□□□□□ -0.69
LINC00342-202ENST00000448494 RAET1EQ8TD07 263 aa10.77□□□□□ -0.69
LINC00342-202ENST00000448494 DNAJA4Q8WW22 397 aaPredicted RBP10.77□□□□□ -0.69
LINC00342-202ENST00000448494 STON2Q8WXE9 905 aa10.77□□□□□ -0.69
LINC00342-202ENST00000448494 AKAP1Q92667 903 aaKnown RBP eCLIP10.77□□□□□ -0.69
LINC00342-202ENST00000448494 GPKOWQ92917 476 aaPredicted RBP eCLIP10.77□□□□□ -0.69
LINC00342-202ENST00000448494 SLC45A3Q96JT2 553 aa10.77□□□□□ -0.69
LINC00342-202ENST00000448494 MARK4Q96L34 752 aa10.77□□□□□ -0.69
LINC00342-202ENST00000448494 ZNF416Q9BWM5 594 aa10.77□□□□□ -0.69
LINC00342-202ENST00000448494 REV1Q9UBZ9 1251 aa10.77□□□□□ -0.69
LINC00342-202ENST00000448494 OSGIN1Q9UJX0 560 aa10.77□□□□□ -0.69
LINC00342-202ENST00000448494 USP21Q9UK80 565 aa10.77□□□□□ -0.69
LINC00342-202ENST00000448494 DNPEPQ9ULA0 475 aa10.77□□□□□ -0.69
LINC00342-202ENST00000448494 BTBD3Q9Y2F9 522 aa10.77□□□□□ -0.69
LINC00342-202ENST00000448494 HRH3Q9Y5N1 445 aa10.77□□□□□ -0.69
LINC00342-202ENST00000448494 ATP5J2-PTCD1G3V325 749 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 GOLGA8SH3BPF8 625 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 STX16-NPEPL1H3BU86 382 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 PTCD1O75127 700 aaKnown RBP10.76□□□□□ -0.69
LINC00342-202ENST00000448494 XYLBO75191 536 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 PIGNO95427 931 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 CHRNA1P02708 482 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 ITGAVP06756 1048 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 TNNI3P19429 210 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 PSMA3P25788 255 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 TSPAN7P41732 249 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 GZMKP49863 264 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 RPP38P78345 283 aaKnown RBP10.76□□□□□ -0.69
LINC00342-202ENST00000448494 EFR3AQ14156 821 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 FAM214AQ32MH5 1076 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 ANKRD39Q53RE8 183 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 PLA2G4FQ68DD2 849 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 ALKBH2Q6NS38 261 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 ANKS3Q6ZW76 656 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 LRRC47Q8N1G4 583 aaKnown RBP10.76□□□□□ -0.69
LINC00342-202ENST00000448494 PPM1NQ8N819 430 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 GLB1L3Q8NCI6 653 aaPredicted RBP10.76□□□□□ -0.69
LINC00342-202ENST00000448494 SMG8Q8ND04 991 aaKnown RBP10.76□□□□□ -0.69
LINC00342-202ENST00000448494 CENPNQ96H22 339 aaPredicted RBP10.76□□□□□ -0.69
LINC00342-202ENST00000448494 CPXM1Q96SM3 734 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 KIFC3Q9BVG8 833 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 UCK1Q9HA47 277 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 RANGRFQ9HD47 186 aaPredicted RBP10.76□□□□□ -0.69
LINC00342-202ENST00000448494 PCDHB16Q9NRJ7 776 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 AGPAT4Q9NRZ5 378 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 CCM2LQ9NUG4 571 aaPredicted RBP10.76□□□□□ -0.69
LINC00342-202ENST00000448494 ADA2Q9NZK5 511 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 GLS2Q9UI32 602 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.76□□□□□ -0.69
LINC00342-202ENST00000448494 ACOT9Q9Y305 439 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 AFG3L2Q9Y4W6 797 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 ACTL7AQ9Y615 435 aa10.76□□□□□ -0.69
LINC00342-202ENST00000448494 TJP1Q07157 1748 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms