RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 TAF1BQ53T94 588 aaPredicted RBP28.38■■■□□ 2.13
CBX4-202ENST00000448310 TMCO4Q5TGY1 634 aa28.38■■■□□ 2.13
CBX4-202ENST00000448310 TAF8Q7Z7C8 310 aa28.38■■■□□ 2.13
CBX4-202ENST00000448310 NAP1L5Q96NT1 182 aaPredicted RBP28.38■■■□□ 2.13
CBX4-202ENST00000448310 BPIFA3Q9BQP9 254 aa28.38■■■□□ 2.13
CBX4-202ENST00000448310 LGR4Q9BXB1 951 aa28.38■■■□□ 2.13
CBX4-202ENST00000448310 ETNK2Q9NVF9 386 aa28.38■■■□□ 2.13
CBX4-202ENST00000448310 B4GALT6Q9UBX8 382 aa28.38■■■□□ 2.13
CBX4-202ENST00000448310 SCINQ9Y6U3 715 aa28.38■■■□□ 2.13
CBX4-202ENST00000448310 SCN8AQ9UQD0 1980 aa28.38■■■□□ 2.13
CBX4-202ENST00000448310 D6RAR5 112 aa28.37■■■□□ 2.13
CBX4-202ENST00000448310 AMPD1P23109 780 aa28.37■■■□□ 2.13
CBX4-202ENST00000448310 CLEC14AQ86T13 490 aa28.37■■■□□ 2.13
CBX4-202ENST00000448310 ZNF843Q8N446 348 aa28.37■■■□□ 2.13
CBX4-202ENST00000448310 Q8N9G6 341 aaPredicted RBP28.37■■■□□ 2.13
CBX4-202ENST00000448310 GPR156Q8NFN8 814 aa28.37■■■□□ 2.13
CBX4-202ENST00000448310 LIN37Q96GY3 246 aaPredicted RBP28.37■■■□□ 2.13
CBX4-202ENST00000448310 TMEM168Q9H0V1 697 aa28.37■■■□□ 2.13
CBX4-202ENST00000448310 ZWILCHQ9H900 591 aa28.37■■■□□ 2.13
CBX4-202ENST00000448310 MOSPD1Q9UJG1 213 aa28.37■■■□□ 2.13
CBX4-202ENST00000448310 PCDHGC4Q9Y5F7 938 aa28.37■■■□□ 2.13
CBX4-202ENST00000448310 SMTNL1A8MU46 457 aa28.36■■■□□ 2.13
CBX4-202ENST00000448310 H3BRJ5 948 aa28.36■■■□□ 2.13
CBX4-202ENST00000448310 ERVH48-1M5A8F1 160 aa28.36■■■□□ 2.13
CBX4-202ENST00000448310 RENBPP51606 427 aa28.36■■■□□ 2.13
CBX4-202ENST00000448310 VAC14Q08AM6 782 aa28.36■■■□□ 2.13
CBX4-202ENST00000448310 ZNF235Q14590 738 aa28.36■■■□□ 2.13
CBX4-202ENST00000448310 FAM46DQ8NEK8 389 aa28.36■■■□□ 2.13
CBX4-202ENST00000448310 CCL4L1Q8NHW4 92 aa28.36■■■□□ 2.13
CBX4-202ENST00000448310 PDCD6IPQ8WUM4 868 aaKnown RBP28.36■■■□□ 2.13
CBX4-202ENST00000448310 HSPH1Q92598 858 aa28.36■■■□□ 2.13
CBX4-202ENST00000448310 LRRN3Q9H3W5 708 aa28.36■■■□□ 2.13
CBX4-202ENST00000448310 CYP4F12Q9HCS2 524 aa28.36■■■□□ 2.13
CBX4-202ENST00000448310 SSUH2Q9Y2M2 353 aa28.36■■■□□ 2.13
CBX4-202ENST00000448310 A0A1W2PQC6 194 aa28.35■■■□□ 2.13
CBX4-202ENST00000448310 B4DGG1 531 aa28.35■■■□□ 2.13
CBX4-202ENST00000448310 AGRPO00253 132 aa28.35■■■□□ 2.13
CBX4-202ENST00000448310 ITGA2BP08514 1039 aa28.35■■■□□ 2.13
CBX4-202ENST00000448310 HGFP14210 728 aa28.35■■■□□ 2.13
CBX4-202ENST00000448310 TRIM23P36406 574 aa28.35■■■□□ 2.13
CBX4-202ENST00000448310 ZNF135P52742 658 aaPredicted RBP28.35■■■□□ 2.13
CBX4-202ENST00000448310 RHDQ02161 417 aa28.35■■■□□ 2.13
CBX4-202ENST00000448310 CFHR1Q03591 330 aa28.35■■■□□ 2.13
CBX4-202ENST00000448310 DPYSL2Q16555 572 aa28.35■■■□□ 2.13
CBX4-202ENST00000448310 PGBD5Q8N414 524 aa28.35■■■□□ 2.13
CBX4-202ENST00000448310 LZTR1Q8N653 840 aa28.35■■■□□ 2.13
CBX4-202ENST00000448310 ZNF599Q96NL3 588 aa28.35■■■□□ 2.13
CBX4-202ENST00000448310 WDR26Q9H7D7 661 aa28.35■■■□□ 2.13
CBX4-202ENST00000448310 ATXN7L1Q9ULK2 861 aaPredicted RBP28.35■■■□□ 2.13
CBX4-202ENST00000448310 ZNF462Q96JM2 2506 aa28.35■■■□□ 2.13
CBX4-202ENST00000448310 A0A1B0GTH6 734 aa28.34■■■□□ 2.13
CBX4-202ENST00000448310 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP28.34■■■□□ 2.13
CBX4-202ENST00000448310 PLD2O14939 933 aa28.34■■■□□ 2.13
CBX4-202ENST00000448310 NOBOXO60393 691 aa28.34■■■□□ 2.13
CBX4-202ENST00000448310 ZIC2O95409 532 aaPredicted RBP28.34■■■□□ 2.13
CBX4-202ENST00000448310 PEX11BO96011 259 aa28.34■■■□□ 2.13
CBX4-202ENST00000448310 KELP23276 732 aa28.34■■■□□ 2.13
CBX4-202ENST00000448310 PCK1P35558 622 aa28.34■■■□□ 2.13
CBX4-202ENST00000448310 ARL4AP40617 200 aa28.34■■■□□ 2.13
CBX4-202ENST00000448310 INHBCP55103 352 aa28.34■■■□□ 2.13
CBX4-202ENST00000448310 CLN3Q13286 438 aa28.34■■■□□ 2.13
CBX4-202ENST00000448310 CNGA3Q16281 694 aa28.34■■■□□ 2.13
CBX4-202ENST00000448310 DENND2CQ68D51 928 aa28.34■■■□□ 2.13
CBX4-202ENST00000448310 PNCKQ6P2M8 343 aa28.34■■■□□ 2.13
CBX4-202ENST00000448310 RAB11FIP2Q7L804 512 aa28.34■■■□□ 2.13
CBX4-202ENST00000448310 POLNQ7Z5Q5 900 aa28.34■■■□□ 2.13
CBX4-202ENST00000448310 CCNJLQ8IV13 435 aa28.34■■■□□ 2.13
CBX4-202ENST00000448310 FBXO39Q8N4B4 442 aa28.34■■■□□ 2.13
CBX4-202ENST00000448310 OR6C4Q8NGE1 309 aa28.34■■■□□ 2.13
CBX4-202ENST00000448310 TRIM11Q96F44 468 aa28.34■■■□□ 2.13
CBX4-202ENST00000448310 CCDC97Q96F63 343 aaPredicted RBP28.34■■■□□ 2.13
CBX4-202ENST00000448310 COQ10AQ96MF6 247 aa28.34■■■□□ 2.13
CBX4-202ENST00000448310 SUDS3Q9H7L9 328 aaPredicted RBP28.34■■■□□ 2.13
CBX4-202ENST00000448310 MRPL47Q9HD33 250 aaKnown RBP28.34■■■□□ 2.13
CBX4-202ENST00000448310 STAU2Q9NUL3 570 aaKnown RBP eCLIP28.34■■■□□ 2.13
CBX4-202ENST00000448310 WDR70Q9NW82 654 aa28.34■■■□□ 2.13
CBX4-202ENST00000448310 AHCTF1Q8WYP5 2266 aa28.34■■■□□ 2.13
CBX4-202ENST00000448310 HOXC4P09017 264 aaPredicted RBP28.33■■■□□ 2.13
CBX4-202ENST00000448310 MYBL1P10243 752 aa28.33■■■□□ 2.13
CBX4-202ENST00000448310 CR2P20023 1033 aa28.33■■■□□ 2.13
CBX4-202ENST00000448310 UGT1A5P35504 534 aa28.33■■■□□ 2.13
CBX4-202ENST00000448310 MLLT3P42568 568 aaPredicted RBP28.33■■■□□ 2.13
CBX4-202ENST00000448310 MAXP61244 160 aa28.33■■■□□ 2.13
CBX4-202ENST00000448310 ZSCAN23Q3MJ62 389 aa28.33■■■□□ 2.13
CBX4-202ENST00000448310 TXNRD3NBQ6F5E7 133 aa28.33■■■□□ 2.13
CBX4-202ENST00000448310 OGFOD3Q6PK18 319 aa28.33■■■□□ 2.13
CBX4-202ENST00000448310 TMCO3Q6UWJ1 677 aa28.33■■■□□ 2.13
CBX4-202ENST00000448310 NUS1Q96E22 293 aa28.33■■■□□ 2.13
CBX4-202ENST00000448310 CSPG4P5Q96PW8 444 aa28.33■■■□□ 2.13
CBX4-202ENST00000448310 ISCUQ9H1K1 167 aa28.33■■■□□ 2.13
CBX4-202ENST00000448310 DPEP2Q9H4A9 486 aa28.33■■■□□ 2.13
CBX4-202ENST00000448310 NOD2Q9HC29 1040 aa28.33■■■□□ 2.13
CBX4-202ENST00000448310 RNF215Q9Y6U7 377 aa28.33■■■□□ 2.13
CBX4-202ENST00000448310 TNFRSF10CO14798 259 aa28.32■■■□□ 2.12
CBX4-202ENST00000448310 HTRA2O43464 458 aaPredicted RBP28.32■■■□□ 2.12
CBX4-202ENST00000448310 CPP00450 1065 aa28.32■■■□□ 2.12
CBX4-202ENST00000448310 TRAF2Q12933 501 aa28.32■■■□□ 2.12
CBX4-202ENST00000448310 PTPRRQ15256 657 aa28.32■■■□□ 2.12
CBX4-202ENST00000448310 CERCAMQ5T4B2 595 aa28.32■■■□□ 2.12
CBX4-202ENST00000448310 JAMLQ86YT9 394 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms